RNA–Protein interactions for RNA: YPR066W

UBA3, Transcript of Protein that activates Rub1p (NEDD8) before neddylation, yeast

Gene UBA3, Length 900 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBA3	YPR066W	YBR063C	P38083	404 aa		4.11	□□□□□ -1.75
UBA3	YPR066W	GCN20	P43535	752 aa	Known RBP	4.11	□□□□□ -1.75
UBA3	YPR066W	ADO1	P47143	340 aa	Known RBP	4.11	□□□□□ -1.75
UBA3	YPR066W	PRM8	P53174	237 aa		4.11	□□□□□ -1.75
UBA3	YPR066W	YPL039W	Q03080	316 aa		4.11	□□□□□ -1.75
UBA3	YPR066W	LIP2	Q06005	328 aa		4.11	□□□□□ -1.75
UBA3	YPR066W	YPR127W	Q06494	345 aa		4.11	□□□□□ -1.75
UBA3	YPR066W	YPR147C	Q06522	304 aa	Known RBP	4.11	□□□□□ -1.75
UBA3	YPR066W	YPL119C-A	Q3E751	87 aa		4.11	□□□□□ -1.75
UBA3	YPR066W	YHR214C-E	Q8TGK0	99 aa		4.11	□□□□□ -1.75
UBA3	YPR066W	RHO1	P06780	209 aa	Known RBP	4.1	□□□□□ -1.75
UBA3	YPR066W	RPL31A	P0C2H8	113 aa	Known RBP	4.1	□□□□□ -1.75
UBA3	YPR066W	SNF4	P12904	322 aa		4.1	□□□□□ -1.75
UBA3	YPR066W	DEP1	P31385	405 aa		4.1	□□□□□ -1.75
UBA3	YPR066W	AST1	P35183	429 aa		4.1	□□□□□ -1.75
UBA3	YPR066W	SHE1	P38200	338 aa		4.1	□□□□□ -1.75
UBA3	YPR066W	KRE29	P40026	464 aa		4.1	□□□□□ -1.75
UBA3	YPR066W	SPO73	P40031	143 aa		4.1	□□□□□ -1.75
UBA3	YPR066W	LSM4	P40070	187 aa	Known RBP	4.1	□□□□□ -1.75
UBA3	YPR066W	COG3	P40094	801 aa		4.1	□□□□□ -1.75
UBA3	YPR066W	STB1	P42845	420 aa		4.1	□□□□□ -1.75
UBA3	YPR066W	BAT2	P47176	376 aa	Known RBP	4.1	□□□□□ -1.75
UBA3	YPR066W	BRR6	P53062	197 aa		4.1	□□□□□ -1.75
UBA3	YPR066W	YMR099C	Q03161	297 aa	Known RBP	4.1	□□□□□ -1.75
UBA3	YPR066W	COQ10	Q08058	207 aa		4.1	□□□□□ -1.75
UBA3	YPR066W	PRM4	Q12498	284 aa		4.1	□□□□□ -1.75
UBA3	YPR066W	BPH1	P25356	2167 aa		4.09	□□□□□ -1.75
UBA3	YPR066W	UBC8	P28263	218 aa		4.09	□□□□□ -1.75
UBA3	YPR066W	MRPL6	P32904	214 aa		4.09	□□□□□ -1.75
UBA3	YPR066W	MSN4	P33749	630 aa		4.09	□□□□□ -1.75
UBA3	YPR066W	YKL187C	P34231	750 aa		4.09	□□□□□ -1.75
UBA3	YPR066W	KTI12	P34253	313 aa	Known RBP	4.09	□□□□□ -1.75
UBA3	YPR066W	PET100	P38958	111 aa		4.09	□□□□□ -1.75
UBA3	YPR066W	YDR102C	Q03864	110 aa		4.09	□□□□□ -1.75
UBA3	YPR066W	ELP6	Q04868	273 aa		4.09	□□□□□ -1.75
UBA3	YPR066W	ATG38	Q05789	226 aa	Known RBP	4.09	□□□□□ -1.75
UBA3	YPR066W	BER1	Q06688	274 aa	Known RBP	4.09	□□□□□ -1.75
UBA3	YPR066W	RAF1	Q06891	181 aa		4.09	□□□□□ -1.75
UBA3	YPR066W	MRX9	Q07349	420 aa	Known RBP	4.09	□□□□□ -1.75
UBA3	YPR066W	DTD1	Q07648	150 aa	Known RBP	4.09	□□□□□ -1.75
UBA3	YPR066W	DPM1	P14020	267 aa	Known RBP	4.08	□□□□□ -1.76
UBA3	YPR066W	YCL042W	P25572	119 aa		4.08	□□□□□ -1.76
UBA3	YPR066W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
UBA3	YPR066W	YEL045C	P32616	141 aa		4.08	□□□□□ -1.76
UBA3	YPR066W	MCH2	P36032	473 aa		4.08	□□□□□ -1.76
UBA3	YPR066W	JEN1	P36035	616 aa		4.08	□□□□□ -1.76
UBA3	YPR066W	YKL071W	P36086	256 aa		4.08	□□□□□ -1.76
UBA3	YPR066W	MRPL39	P36533	70 aa		4.08	□□□□□ -1.76
UBA3	YPR066W	YPC1	P38298	316 aa		4.08	□□□□□ -1.76
UBA3	YPR066W	PET8	P38921	284 aa		4.08	□□□□□ -1.76
UBA3	YPR066W	SOP4	P39543	234 aa	Predicted RBP	4.08	□□□□□ -1.76
UBA3	YPR066W	YPL077C	Q02831	240 aa		4.08	□□□□□ -1.76
UBA3	YPR066W	IRC19	Q07843	230 aa		4.08	□□□□□ -1.76
UBA3	YPR066W	YDL180W	Q12301	547 aa		4.08	□□□□□ -1.76
UBA3	YPR066W	UTP23	Q12339	254 aa	Known RBP	4.08	□□□□□ -1.76
UBA3	YPR066W	RPL21B	Q12672	160 aa	Known RBP	4.08	□□□□□ -1.76
UBA3	YPR066W	Q0297	Q9ZZV8	51 aa		4.08	□□□□□ -1.76
UBA3	YPR066W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
UBA3	YPR066W	NUF2	P33895	451 aa		4.07	□□□□□ -1.76
UBA3	YPR066W	GPX1	P36014	167 aa		4.07	□□□□□ -1.76
UBA3	YPR066W	ARN2	P38724	620 aa		4.07	□□□□□ -1.76
UBA3	YPR066W	YER084W	P40057	128 aa		4.07	□□□□□ -1.76
UBA3	YPR066W	GDS1	P41913	522 aa		4.07	□□□□□ -1.76
UBA3	YPR066W	IGD1	P43598	195 aa		4.07	□□□□□ -1.76
UBA3	YPR066W	DML1	Q03652	475 aa		4.07	□□□□□ -1.76
UBA3	YPR066W	OST6	Q03723	332 aa		4.07	□□□□□ -1.76
UBA3	YPR066W	ATC1	Q04005	294 aa		4.07	□□□□□ -1.76
UBA3	YPR066W	YDR115W	Q04598	105 aa		4.07	□□□□□ -1.76
UBA3	YPR066W	ASR1	Q06834	288 aa		4.07	□□□□□ -1.76
UBA3	YPR066W	NIP7	Q08962	181 aa	Known RBP	4.07	□□□□□ -1.76
UBA3	YPR066W	VPH2	P32341	215 aa		4.06	□□□□□ -1.76
UBA3	YPR066W	AVT7	P40501	490 aa		4.06	□□□□□ -1.76
UBA3	YPR066W	UBC13	P52490	153 aa		4.06	□□□□□ -1.76
UBA3	YPR066W	GRX5	Q02784	150 aa		4.06	□□□□□ -1.76
UBA3	YPR066W	SCW10	Q04951	389 aa		4.06	□□□□□ -1.76
UBA3	YPR066W	TAZ1	Q06510	381 aa		4.06	□□□□□ -1.76
UBA3	YPR066W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
UBA3	YPR066W	MIM1	Q08176	113 aa		4.06	□□□□□ -1.76
UBA3	YPR066W	TMC1	Q08422	150 aa	Predicted RBP	4.06	□□□□□ -1.76
UBA3	YPR066W	YOR289W	Q12012	251 aa	Predicted RBP	4.06	□□□□□ -1.76
UBA3	YPR066W	CDC36	P06100	191 aa	Predicted RBP	4.05	□□□□□ -1.76
UBA3	YPR066W	RPL16B	P26785	198 aa	Known RBP	4.05	□□□□□ -1.76
UBA3	YPR066W	CAM1	P29547	415 aa	Known RBP	4.05	□□□□□ -1.76
UBA3	YPR066W	YKL063C	P35725	167 aa		4.05	□□□□□ -1.76
UBA3	YPR066W	YRB2	P40517	327 aa		4.05	□□□□□ -1.76
UBA3	YPR066W	YIL012W	P40551	113 aa		4.05	□□□□□ -1.76
UBA3	YPR066W	VHT1	P53241	593 aa		4.05	□□□□□ -1.76
UBA3	YPR066W	PGA1	P53896	198 aa		4.05	□□□□□ -1.76
UBA3	YPR066W	RNH201	P53942	307 aa		4.05	□□□□□ -1.76
UBA3	YPR066W	ADD37	Q03233	198 aa		4.05	□□□□□ -1.76
UBA3	YPR066W	TLG1	Q03322	224 aa		4.05	□□□□□ -1.76
UBA3	YPR066W	YMR226C	Q05016	267 aa	Known RBP	4.05	□□□□□ -1.76
UBA3	YPR066W	CTS2	Q06350	511 aa		4.05	□□□□□ -1.76
UBA3	YPR066W	GPN3	Q06543	272 aa		4.05	□□□□□ -1.76
UBA3	YPR066W	RIB3	Q99258	208 aa		4.05	□□□□□ -1.76
UBA3	YPR066W	SNF6	P18888	332 aa		4.04	□□□□□ -1.76
UBA3	YPR066W	RRG9	P40156	214 aa		4.04	□□□□□ -1.76
UBA3	YPR066W	YMR144W	P40214	342 aa	Known RBP	4.04	□□□□□ -1.76
UBA3	YPR066W	MRX5	P47007	382 aa		4.04	□□□□□ -1.76
UBA3	YPR066W	YJL118W	P47022	219 aa		4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 24.1 ms