RNA–Protein interactions for RNA: YOL038W

PRE6, Transcript of Alpha 4 subunit of the 20S proteasome, yeastyeast

Gene PRE6, Length 765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE6YOL038W DIE2P50076 525 aa8.51□□□□□ -1.05
PRE6YOL038W CWC25P53854 179 aaKnown RBP8.51□□□□□ -1.05
PRE6YOL038W URA6P15700 204 aa8.5□□□□□ -1.05
PRE6YOL038W PHO85P17157 305 aa8.5□□□□□ -1.05
PRE6YOL038W SPT14P32363 452 aa8.5□□□□□ -1.05
PRE6YOL038W SOL1P50278 321 aa8.5□□□□□ -1.05
PRE6YOL038W PEX10Q05568 337 aa8.5□□□□□ -1.05
PRE6YOL038W SWT1Q12104 458 aa8.5□□□□□ -1.05
PRE6YOL038W HTZ1Q12692 134 aaKnown RBP8.5□□□□□ -1.05
PRE6YOL038W GPM1P00950 247 aaKnown RBP8.49□□□□□ -1.05
PRE6YOL038W URA3P03962 267 aa8.49□□□□□ -1.05
PRE6YOL038W RPL3P14126 387 aaKnown RBP8.49□□□□□ -1.05
PRE6YOL038W PUP1P25043 261 aa8.49□□□□□ -1.05
PRE6YOL038W ERG2P32352 222 aa8.49□□□□□ -1.05
PRE6YOL038W SSO2P39926 295 aa8.49□□□□□ -1.05
PRE6YOL038W CAT5P41735 233 aa8.49□□□□□ -1.05
PRE6YOL038W SPG4Q04438 115 aa8.49□□□□□ -1.05
PRE6YOL038W ASM4Q05166 528 aa8.49□□□□□ -1.05
PRE6YOL038W KEI1Q06346 221 aa8.49□□□□□ -1.05
PRE6YOL038W YLR031WQ07978 186 aa8.49□□□□□ -1.05
PRE6YOL038W AEP3Q12089 606 aa8.49□□□□□ -1.05
PRE6YOL038W ILV5P06168 395 aaKnown RBP8.48□□□□□ -1.05
PRE6YOL038W SEN2P16658 377 aa8.48□□□□□ -1.05
PRE6YOL038W IFM1P25038 676 aa8.48□□□□□ -1.05
PRE6YOL038W YCR061WP25639 631 aa8.48□□□□□ -1.05
PRE6YOL038W INO2P26798 304 aa8.48□□□□□ -1.05
PRE6YOL038W COQ2P32378 372 aa8.48□□□□□ -1.05
PRE6YOL038W RNP1P32385 249 aa8.48□□□□□ -1.05
PRE6YOL038W HYM1P32464 399 aa8.48□□□□□ -1.05
PRE6YOL038W SPS18P32572 300 aa8.48□□□□□ -1.05
PRE6YOL038W AIM25P47140 327 aa8.48□□□□□ -1.05
PRE6YOL038W LSM7P53905 115 aaKnown RBP8.48□□□□□ -1.05
PRE6YOL038W YML122CQ03207 126 aa8.48□□□□□ -1.05
PRE6YOL038W MCH1Q07376 486 aa8.48□□□□□ -1.05
PRE6YOL038W MSS1P32559 526 aaPredicted RBP8.47□□□□□ -1.05
PRE6YOL038W UTP30P36144 274 aaKnown RBP8.47□□□□□ -1.05
PRE6YOL038W ECM31P38122 312 aa8.47□□□□□ -1.05
PRE6YOL038W YBR197CP38306 217 aa8.47□□□□□ -1.05
PRE6YOL038W AIM20P40451 204 aa8.47□□□□□ -1.05
PRE6YOL038W PRM5P40476 318 aa8.47□□□□□ -1.05
PRE6YOL038W RPA43P46669 326 aa8.47□□□□□ -1.05
PRE6YOL038W SLX9P53251 210 aaPredicted RBP8.47□□□□□ -1.05
PRE6YOL038W TSA2Q04120 196 aa8.47□□□□□ -1.05
PRE6YOL038W JID1Q12350 301 aa8.47□□□□□ -1.05
PRE6YOL038W YOS1Q3E834 85 aa8.47□□□□□ -1.05
PRE6YOL038W CYC1P00044 109 aaPredicted RBP8.46□□□□□ -1.06
PRE6YOL038W HEM13P11353 328 aaKnown RBP8.46□□□□□ -1.06
PRE6YOL038W PRE3P38624 215 aa8.46□□□□□ -1.06
PRE6YOL038W YJR011CP47086 261 aaPredicted RBP8.46□□□□□ -1.06
PRE6YOL038W PUS4P48567 403 aaKnown RBP8.46□□□□□ -1.06
PRE6YOL038W TPN1P53099 579 aa8.46□□□□□ -1.06
PRE6YOL038W MRPL22P53881 309 aa8.46□□□□□ -1.06
PRE6YOL038W NRG1Q03125 231 aa8.46□□□□□ -1.06
PRE6YOL038W YDR286CQ05530 114 aa8.46□□□□□ -1.06
PRE6YOL038W DGK1Q12382 290 aa8.46□□□□□ -1.06
PRE6YOL038W YLR365WQ7LIF2 110 aa8.46□□□□□ -1.06
PRE6YOL038W FUS3P16892 353 aaKnown RBP8.45□□□□□ -1.06
PRE6YOL038W MIG1P27705 504 aa8.45□□□□□ -1.06
PRE6YOL038W YKR045CP36138 183 aa8.45□□□□□ -1.06
PRE6YOL038W YHR122WP38829 231 aa8.45□□□□□ -1.06
PRE6YOL038W IKI1P38874 309 aa8.45□□□□□ -1.06
PRE6YOL038W YJL213WP40896 331 aa8.45□□□□□ -1.06
PRE6YOL038W DPB4Q04603 196 aaKnown RBP8.45□□□□□ -1.06
PRE6YOL038W YPD1Q07688 167 aa8.45□□□□□ -1.06
PRE6YOL038W YOR292CQ08743 309 aa8.45□□□□□ -1.06
PRE6YOL038W YPR108W-AQ3E7B3 70 aa8.45□□□□□ -1.06
PRE6YOL038W PET54P10834 293 aa8.44□□□□□ -1.06
PRE6YOL038W RIB7P33312 244 aa8.44□□□□□ -1.06
PRE6YOL038W RSM27P53305 110 aa8.44□□□□□ -1.06
PRE6YOL038W TY1A-MR1Q04215 440 aa8.44□□□□□ -1.06
PRE6YOL038W YDL086WQ07505 273 aa8.44□□□□□ -1.06
PRE6YOL038W CDC23P16522 626 aa8.43□□□□□ -1.06
PRE6YOL038W MRS4P23500 304 aa8.43□□□□□ -1.06
PRE6YOL038W FMT1P32785 401 aa8.43□□□□□ -1.06
PRE6YOL038W PCL7P40186 285 aa8.43□□□□□ -1.06
PRE6YOL038W YFL054CP43549 646 aa8.43□□□□□ -1.06
PRE6YOL038W YIP1P53039 248 aa8.43□□□□□ -1.06
PRE6YOL038W MRPL23Q12487 163 aaPredicted RBP8.43□□□□□ -1.06
PRE6YOL038W LSB5P25369 354 aa8.42□□□□□ -1.06
PRE6YOL038W FEN2P25621 512 aaKnown RBP8.42□□□□□ -1.06
PRE6YOL038W MRP20P32387 263 aa8.42□□□□□ -1.06
PRE6YOL038W FLO10P36170 1169 aa8.42□□□□□ -1.06
PRE6YOL038W VPS55P47111 140 aa8.42□□□□□ -1.06
PRE6YOL038W ARO8P53090 500 aaKnown RBP8.42□□□□□ -1.06
PRE6YOL038W CRH1P53301 507 aa8.42□□□□□ -1.06
PRE6YOL038W TY1A-DR2Q03964 440 aaKnown RBP8.42□□□□□ -1.06
PRE6YOL038W RDI1Q12434 202 aa8.42□□□□□ -1.06
PRE6YOL038W HUG1Q6Q5K6 68 aa8.42□□□□□ -1.06
PRE6YOL038W GAL1P04385 528 aa8.41□□□□□ -1.06
PRE6YOL038W SPS2P08459 502 aa8.41□□□□□ -1.06
PRE6YOL038W ROX3P25046 220 aa8.41□□□□□ -1.06
PRE6YOL038W YUH1P35127 236 aa8.41□□□□□ -1.06
PRE6YOL038W RPA14P50106 137 aa8.41□□□□□ -1.06
PRE6YOL038W RPL9BP51401 191 aaKnown RBP8.41□□□□□ -1.06
PRE6YOL038W ALG9P53868 555 aaKnown RBP8.41□□□□□ -1.06
PRE6YOL038W YML018CQ03730 393 aa8.41□□□□□ -1.06
PRE6YOL038W LPP1Q04396 274 aa8.41□□□□□ -1.06
PRE6YOL038W YHR212W-AP0CX91 67 aa8.4□□□□□ -1.06
PRE6YOL038W DIT1P21623 536 aa8.4□□□□□ -1.06
PRE6YOL038W RNA14P25298 677 aaKnown RBP8.4□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms