RNA–Protein interactions for RNA: YMR139W

RIM11, Transcript of Protein kinase, yeast

Gene RIM11, Length 1,113 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIM11	YMR139W	YJR011C	P47086	261 aa	Predicted RBP	3.1	□□□□□ -1.91
RIM11	YMR139W	ADO1	P47143	340 aa	Known RBP	3.1	□□□□□ -1.91
RIM11	YMR139W	PGU1	P47180	361 aa		3.1	□□□□□ -1.91
RIM11	YMR139W	AVT4	P50944	713 aa		3.1	□□□□□ -1.91
RIM11	YMR139W	YCL001W-A	P87012	153 aa		3.1	□□□□□ -1.91
RIM11	YMR139W	YVH1	Q02256	364 aa	Known RBP	3.1	□□□□□ -1.91
RIM11	YMR139W	YPL039W	Q03080	316 aa		3.1	□□□□□ -1.91
RIM11	YMR139W	SNO1	Q03144	224 aa		3.1	□□□□□ -1.91
RIM11	YMR139W	THI74	Q04083	370 aa		3.1	□□□□□ -1.91
RIM11	YMR139W	ERP1	Q05359	219 aa	Known RBP	3.1	□□□□□ -1.91
RIM11	YMR139W	DXO1	Q06349	442 aa		3.1	□□□□□ -1.91
RIM11	YMR139W	MRX9	Q07349	420 aa	Known RBP	3.1	□□□□□ -1.91
RIM11	YMR139W	IZH3	Q07959	543 aa		3.1	□□□□□ -1.91
RIM11	YMR139W	ZEO1	Q08245	113 aa		3.1	□□□□□ -1.91
RIM11	YMR139W	YCT1	Q12235	531 aa		3.1	□□□□□ -1.91
RIM11	YMR139W	MED4	Q12343	284 aa		3.1	□□□□□ -1.91
RIM11	YMR139W	HUT1	Q12520	339 aa		3.1	□□□□□ -1.91
RIM11	YMR139W	COX19	Q3E731	98 aa		3.1	□□□□□ -1.91
RIM11	YMR139W	BLM10	P43583	2143 aa		3.1	□□□□□ -1.91
RIM11	YMR139W	RPL7A	P05737	244 aa	Known RBP	3.09	□□□□□ -1.91
RIM11	YMR139W	YLL053C	P0CD98	152 aa		3.09	□□□□□ -1.91
RIM11	YMR139W	YML003W	P0CF16	290 aa		3.09	□□□□□ -1.91
RIM11	YMR139W	YHR214C-D	P0CX93	97 aa		3.09	□□□□□ -1.91
RIM11	YMR139W	OLE1	P21147	510 aa	Known RBP	3.09	□□□□□ -1.91
RIM11	YMR139W	MRS4	P23500	304 aa		3.09	□□□□□ -1.91
RIM11	YMR139W	REC114	P32841	428 aa		3.09	□□□□□ -1.91
RIM11	YMR139W	UTH1	P36135	365 aa		3.09	□□□□□ -1.91
RIM11	YMR139W	SDH8	P38345	138 aa		3.09	□□□□□ -1.91
RIM11	YMR139W	YEA6	P39953	335 aa		3.09	□□□□□ -1.91
RIM11	YMR139W	YND1	P40009	630 aa		3.09	□□□□□ -1.91
RIM11	YMR139W	SHO1	P40073	367 aa		3.09	□□□□□ -1.91
RIM11	YMR139W	RPL13B	P40212	199 aa	Known RBP	3.09	□□□□□ -1.91
RIM11	YMR139W	RFC2	P40348	353 aa		3.09	□□□□□ -1.91
RIM11	YMR139W	REE1	P40893	198 aa		3.09	□□□□□ -1.91
RIM11	YMR139W	CUP9	P41817	306 aa		3.09	□□□□□ -1.91
RIM11	YMR139W	MOB2	P43563	287 aa		3.09	□□□□□ -1.91
RIM11	YMR139W	GNA1	P43577	159 aa	Predicted RBP	3.09	□□□□□ -1.91
RIM11	YMR139W	GWT1	P47026	490 aa		3.09	□□□□□ -1.91
RIM11	YMR139W	YJL016W	P47072	561 aa		3.09	□□□□□ -1.91
RIM11	YMR139W	YJR056C	P47115	236 aa		3.09	□□□□□ -1.91
RIM11	YMR139W	MOG1	P47123	218 aa		3.09	□□□□□ -1.91
RIM11	YMR139W	SSN8	P47821	323 aa		3.09	□□□□□ -1.91
RIM11	YMR139W	ASK10	P48361	1146 aa		3.09	□□□□□ -1.91
RIM11	YMR139W	MSY1	P48527	492 aa		3.09	□□□□□ -1.91
RIM11	YMR139W	SOL1	P50278	321 aa		3.09	□□□□□ -1.91
RIM11	YMR139W	NSA1	P53136	463 aa	Predicted RBP	3.09	□□□□□ -1.91
RIM11	YMR139W	HOL1	P53389	586 aa		3.09	□□□□□ -1.91
RIM11	YMR139W	GPI15	P53961	229 aa		3.09	□□□□□ -1.91
RIM11	YMR139W	RSM23	Q01163	450 aa		3.09	□□□□□ -1.91
RIM11	YMR139W	VPS28	Q02767	242 aa		3.09	□□□□□ -1.91
RIM11	YMR139W	MRPS17	Q03246	237 aa	Predicted RBP	3.09	□□□□□ -1.91
RIM11	YMR139W	DIG2	Q03373	323 aa	Known RBP	3.09	□□□□□ -1.91
RIM11	YMR139W	CGI121	Q03705	181 aa	Known RBP	3.09	□□□□□ -1.91
RIM11	YMR139W	FIT1	Q04433	528 aa		3.09	□□□□□ -1.91
RIM11	YMR139W	DCS1	Q06151	350 aa		3.09	□□□□□ -1.91
RIM11	YMR139W	YPD1	Q07688	167 aa		3.09	□□□□□ -1.91
RIM11	YMR139W	YOR376W	Q08900	122 aa		3.09	□□□□□ -1.91
RIM11	YMR139W	GRE1	Q08969	168 aa		3.09	□□□□□ -1.91
RIM11	YMR139W	RPL7B	Q12213	244 aa	Known RBP	3.09	□□□□□ -1.91
RIM11	YMR139W	RPL13A	Q12690	199 aa	Predicted RBP	3.09	□□□□□ -1.91
RIM11	YMR139W	SEC16	P48415	2195 aa	Known RBP	3.08	□□□□□ -1.92
RIM11	YMR139W	COX5B	P00425	151 aa		3.08	□□□□□ -1.92
RIM11	YMR139W	PDX1	P16451	410 aa		3.08	□□□□□ -1.92
RIM11	YMR139W	PEX4	P29340	183 aa		3.08	□□□□□ -1.92
RIM11	YMR139W	OCH1	P31755	480 aa		3.08	□□□□□ -1.92
RIM11	YMR139W	GLC7	P32598	312 aa	Known RBP	3.08	□□□□□ -1.92
RIM11	YMR139W	ARC40	P38328	384 aa	Known RBP	3.08	□□□□□ -1.92
RIM11	YMR139W	YEA4	P40004	342 aa		3.08	□□□□□ -1.92
RIM11	YMR139W	SPC25	P40014	221 aa		3.08	□□□□□ -1.92
RIM11	YMR139W	GPP2	P40106	250 aa	Known RBP	3.08	□□□□□ -1.92
RIM11	YMR139W	GTT1	P40582	234 aa		3.08	□□□□□ -1.92
RIM11	YMR139W	NSE4	P43124	402 aa		3.08	□□□□□ -1.92
RIM11	YMR139W	PCP1	P53259	346 aa		3.08	□□□□□ -1.92
RIM11	YMR139W	YNR048W	P53740	393 aa		3.08	□□□□□ -1.92
RIM11	YMR139W	YIF1	P53845	314 aa	Known RBP	3.08	□□□□□ -1.92
RIM11	YMR139W	HHT1	P61830	136 aa		3.08	□□□□□ -1.92
RIM11	YMR139W	ATG21	Q02887	496 aa		3.08	□□□□□ -1.92
RIM11	YMR139W	MIX14	Q04341	121 aa		3.08	□□□□□ -1.92
RIM11	YMR139W	YMR253C	Q04835	414 aa		3.08	□□□□□ -1.92
RIM11	YMR139W	YDR286C	Q05530	114 aa		3.08	□□□□□ -1.92
RIM11	YMR139W	YPR145C-A	Q2V2P0	78 aa		3.08	□□□□□ -1.92
RIM11	YMR139W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	3.07	□□□□□ -1.92	not detected
RIM11	YMR139W	CDC28	P00546	298 aa	Known RBP	3.07	□□□□□ -1.92
RIM11	YMR139W	RPL30	P14120	105 aa	Known RBP	3.07	□□□□□ -1.92
RIM11	YMR139W	APA2	P22108	325 aa		3.07	□□□□□ -1.92
RIM11	YMR139W	MDH2	P22133	377 aa		3.07	□□□□□ -1.92
RIM11	YMR139W	ERG2	P32352	222 aa		3.07	□□□□□ -1.92
RIM11	YMR139W	MNS1	P32906	549 aa		3.07	□□□□□ -1.92
RIM11	YMR139W	CLB6	P32943	380 aa		3.07	□□□□□ -1.92
RIM11	YMR139W	SOF1	P33750	489 aa	Known RBP	3.07	□□□□□ -1.92
RIM11	YMR139W	SWD2	P36104	329 aa	Predicted RBP	3.07	□□□□□ -1.92
RIM11	YMR139W	ATG8	P38182	117 aa	RIP-Chip data	3.07	□□□□□ -1.92	not detected
RIM11	YMR139W	YBR096W	P38256	230 aa		3.07	□□□□□ -1.92
RIM11	YMR139W	ERV15	P38312	142 aa		3.07	□□□□□ -1.92
RIM11	YMR139W	DUG1	P43616	481 aa	Known RBP	3.07	□□□□□ -1.92
RIM11	YMR139W	RPA34	P47006	233 aa	Predicted RBP	3.07	□□□□□ -1.92
RIM11	YMR139W	IKS1	P47042	667 aa		3.07	□□□□□ -1.92
RIM11	YMR139W	TAF4	P50105	388 aa		3.07	□□□□□ -1.92
RIM11	YMR139W	NRM1	P53718	249 aa		3.07	□□□□□ -1.92
RIM11	YMR139W	SKO1	Q02100	647 aa		3.07	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 69.5 ms