RNA–Protein interactions for RNA: YLR247C

IRC20, Transcript of E3 ubiquitin ligase and putative helicase, yeastyeast

Gene IRC20, Length 4,671 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IRC20YLR247C SUA7P29055 345 aaPredicted RBP1.63□□□□□ -2.15
IRC20YLR247C ARO4P32449 370 aaKnown RBP1.63□□□□□ -2.15
IRC20YLR247C NDC1P32500 655 aa1.63□□□□□ -2.15
IRC20YLR247C AFR1P33304 620 aa1.63□□□□□ -2.15
IRC20YLR247C RMA1P36001 430 aaKnown RBP1.63□□□□□ -2.15
IRC20YLR247C KKQ8P36004 724 aa1.63□□□□□ -2.15
IRC20YLR247C COS111P38308 924 aa1.63□□□□□ -2.15
IRC20YLR247C YHR035WP38769 630 aa1.63□□□□□ -2.15
IRC20YLR247C YMR141CP40211 102 aa1.63□□□□□ -2.15
IRC20YLR247C MSL1P40567 111 aaPredicted RBP1.63□□□□□ -2.15
IRC20YLR247C YAE1P47118 141 aaPredicted RBP1.63□□□□□ -2.15
IRC20YLR247C ALG12P53730 551 aa1.63□□□□□ -2.15
IRC20YLR247C YLR460CP54007 376 aa1.63□□□□□ -2.15
IRC20YLR247C TIM8P57744 87 aa1.63□□□□□ -2.15
IRC20YLR247C TRS31Q03337 283 aa1.63□□□□□ -2.15
IRC20YLR247C VPS71Q03433 280 aa1.63□□□□□ -2.15
IRC20YLR247C HSP31Q04432 237 aa1.63□□□□□ -2.15
IRC20YLR247C TAF9Q05027 157 aa1.63□□□□□ -2.15
IRC20YLR247C LDS2Q08218 356 aa1.63□□□□□ -2.15
IRC20YLR247C REX3Q12090 404 aa1.63□□□□□ -2.15
IRC20YLR247C PEX11Q12462 236 aa1.63□□□□□ -2.15
IRC20YLR247C YPL119C-AQ3E751 87 aa1.63□□□□□ -2.15
IRC20YLR247C SPT15P13393 240 aaKnown RBP1.63□□□□□ -2.15
IRC20YLR247C SEC59P20048 519 aa1.63□□□□□ -2.15
IRC20YLR247C ATP12P22135 325 aa1.63□□□□□ -2.15
IRC20YLR247C YCL042WP25572 119 aa1.63□□□□□ -2.15
IRC20YLR247C INO2P26798 304 aa1.63□□□□□ -2.15
IRC20YLR247C UTP30P36144 274 aaKnown RBP1.63□□□□□ -2.15
IRC20YLR247C ERV15P38312 142 aa1.63□□□□□ -2.15
IRC20YLR247C SSH1P38353 490 aaKnown RBP1.63□□□□□ -2.15
IRC20YLR247C ECM34P38728 170 aa1.63□□□□□ -2.15
IRC20YLR247C PEX22P39718 180 aa1.63□□□□□ -2.15
IRC20YLR247C BUR6P40096 142 aa1.63□□□□□ -2.15
IRC20YLR247C IRC7P43623 340 aa1.63□□□□□ -2.15
IRC20YLR247C DPB11P47027 764 aaPredicted RBP1.63□□□□□ -2.15
IRC20YLR247C YGR164WP53291 111 aa1.63□□□□□ -2.15
IRC20YLR247C NUP100Q02629 959 aa1.63□□□□□ -2.15
IRC20YLR247C ODC1Q03028 310 aa1.63□□□□□ -2.15
IRC20YLR247C SMD2Q06217 110 aaKnown RBP1.63□□□□□ -2.15
IRC20YLR247C XYL2Q07993 356 aa1.63□□□□□ -2.15
IRC20YLR247C HNT3Q08702 217 aa1.63□□□□□ -2.15
IRC20YLR247C MRPL23Q12487 163 aaPredicted RBP1.63□□□□□ -2.15
IRC20YLR247C ATG40Q99325 256 aa1.63□□□□□ -2.15
IRC20YLR247C FSH3Q99369 266 aa1.63□□□□□ -2.15
IRC20YLR247C HHF1P02309 103 aaKnown RBP1.63□□□□□ -2.15
IRC20YLR247C YML003WP0CF16 290 aa1.63□□□□□ -2.15
IRC20YLR247C IMA3P0CW40 589 aa1.63□□□□□ -2.15
IRC20YLR247C IMA4P0CW41 589 aa1.63□□□□□ -2.15
IRC20YLR247C MRPL44P19956 98 aa1.63□□□□□ -2.15
IRC20YLR247C YCL002CP25565 263 aa1.63□□□□□ -2.15
IRC20YLR247C KAR4P25583 335 aa1.63□□□□□ -2.15
IRC20YLR247C IDH2P28241 369 aaKnown RBP1.63□□□□□ -2.15
IRC20YLR247C PUB1P32588 453 aaKnown RBP RIP-Chip data1.63□□□□□ -2.15not detected
IRC20YLR247C SHB17P36136 271 aaKnown RBP1.63□□□□□ -2.15
IRC20YLR247C PRS4P38063 326 aaPredicted RBP1.63□□□□□ -2.15
IRC20YLR247C YKE4P40544 346 aa1.63□□□□□ -2.15
IRC20YLR247C IRC24P40580 263 aa1.63□□□□□ -2.15
IRC20YLR247C NCA3P46955 337 aa1.63□□□□□ -2.15
IRC20YLR247C TPN1P53099 579 aa1.63□□□□□ -2.15
IRC20YLR247C RIM8P53179 542 aa1.63□□□□□ -2.15
IRC20YLR247C BUD32P53323 261 aa1.63□□□□□ -2.15
IRC20YLR247C ALG9P53868 555 aaKnown RBP1.63□□□□□ -2.15
IRC20YLR247C YMD8Q03697 442 aa1.63□□□□□ -2.15
IRC20YLR247C SWT1Q12104 458 aa1.63□□□□□ -2.15
IRC20YLR247C YPR145C-AQ2V2P0 78 aa1.63□□□□□ -2.15
IRC20YLR247C RPS31P05759 152 aaKnown RBP1.62□□□□□ -2.15
IRC20YLR247C HSP30P25619 332 aa1.62□□□□□ -2.15
IRC20YLR247C SNC1P31109 117 aa1.62□□□□□ -2.15
IRC20YLR247C UPS2P35200 230 aa1.62□□□□□ -2.15
IRC20YLR247C YKT6P36015 200 aaKnown RBP1.62□□□□□ -2.15
IRC20YLR247C TCM62P38228 572 aaKnown RBP1.62□□□□□ -2.15
IRC20YLR247C CSH1P38287 376 aa1.62□□□□□ -2.15
IRC20YLR247C TDA3P38758 523 aa1.62□□□□□ -2.15
IRC20YLR247C GAT2P40209 560 aa1.62□□□□□ -2.15
IRC20YLR247C IBA57P47158 497 aa1.62□□□□□ -2.15
IRC20YLR247C YGL185CP53100 379 aa1.62□□□□□ -2.15
IRC20YLR247C PNC1P53184 216 aaKnown RBP1.62□□□□□ -2.15
IRC20YLR247C FMP48P53233 369 aa1.62□□□□□ -2.15
IRC20YLR247C ASI2P53895 289 aa1.62□□□□□ -2.15
IRC20YLR247C YSA1Q01976 231 aa1.62□□□□□ -2.15
IRC20YLR247C REC102Q02721 264 aa1.62□□□□□ -2.15
IRC20YLR247C PET191Q02772 108 aa1.62□□□□□ -2.15
IRC20YLR247C LOA1Q06508 300 aa1.62□□□□□ -2.15
IRC20YLR247C YOR072WQ08486 104 aa1.62□□□□□ -2.15
IRC20YLR247C IRC13Q08630 104 aa1.62□□□□□ -2.15
IRC20YLR247C MCP1Q12106 302 aa1.62□□□□□ -2.15
IRC20YLR247C YPR014CQ6B0W2 109 aa1.62□□□□□ -2.15
IRC20YLR247C RPL15AP05748 204 aaKnown RBP1.62□□□□□ -2.15
IRC20YLR247C FBA1P14540 359 aaKnown RBP1.62□□□□□ -2.15
IRC20YLR247C CTA1P15202 515 aa1.62□□□□□ -2.15
IRC20YLR247C FUN19P28003 413 aaPredicted RBP1.62□□□□□ -2.15
IRC20YLR247C ACH1P32316 526 aa1.62□□□□□ -2.15
IRC20YLR247C ZRT1P32804 376 aa1.62□□□□□ -2.15
IRC20YLR247C GSP2P32836 220 aaKnown RBP1.62□□□□□ -2.15
IRC20YLR247C RIB7P33312 244 aa1.62□□□□□ -2.15
IRC20YLR247C ECM15P35195 104 aa1.62□□□□□ -2.15
IRC20YLR247C IRS4P36115 615 aaKnown RBP1.62□□□□□ -2.15
IRC20YLR247C SKG1P36169 355 aa1.62□□□□□ -2.15
IRC20YLR247C CTP1P38152 299 aa1.62□□□□□ -2.15
IRC20YLR247C SWC5P38326 303 aa1.62□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 35.7 ms