RNA–Protein interactions for RNA: YLR192C

HCR1, Transcript of eIF3j component of translation initiation factor 3 (eIF3), yeast

Gene HCR1, Length 798 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HCR1	YLR192C	RAF1	Q06891	181 aa		4.88	□□□□□ -1.63
HCR1	YLR192C	HEM25	Q07534	307 aa		4.88	□□□□□ -1.63
HCR1	YLR192C	YRM1	Q12340	786 aa		4.88	□□□□□ -1.63
HCR1	YLR192C	REP2	P03872	296 aa		4.87	□□□□□ -1.63
HCR1	YLR192C	SSA3	P09435	649 aa	Known RBP	4.87	□□□□□ -1.63
HCR1	YLR192C	RPS16A	P0CX51	143 aa	Known RBP	4.87	□□□□□ -1.63
HCR1	YLR192C	RPS16B	P0CX52	143 aa	Known RBP	4.87	□□□□□ -1.63
HCR1	YLR192C	PDC2	P32896	925 aa		4.87	□□□□□ -1.63
HCR1	YLR192C	LAG1	P38703	411 aa		4.87	□□□□□ -1.63
HCR1	YLR192C	SSO2	P39926	295 aa		4.87	□□□□□ -1.63
HCR1	YLR192C	TAD2	P47058	250 aa		4.87	□□□□□ -1.63
HCR1	YLR192C	ADO1	P47143	340 aa	Known RBP	4.87	□□□□□ -1.63
HCR1	YLR192C	HHT1	P61830	136 aa		4.87	□□□□□ -1.63
HCR1	YLR192C	YML018C	Q03730	393 aa		4.87	□□□□□ -1.63
HCR1	YLR192C	YDR391C	Q04170	232 aa		4.87	□□□□□ -1.63
HCR1	YLR192C	YLR108C	Q12259	485 aa		4.87	□□□□□ -1.63
HCR1	YLR192C	MCT1	Q12283	360 aa		4.87	□□□□□ -1.63
HCR1	YLR192C	ATP14	Q12349	124 aa		4.87	□□□□□ -1.63
HCR1	YLR192C	IZH2	Q12442	317 aa		4.87	□□□□□ -1.63
HCR1	YLR192C	YER190C-B	P0CX94	160 aa		4.86	□□□□□ -1.63
HCR1	YLR192C	YEL077W-A	P0CX95	160 aa		4.86	□□□□□ -1.63
HCR1	YLR192C	YGR296C-B	P0CX96	160 aa		4.86	□□□□□ -1.63
HCR1	YLR192C	YPL283W-B	P0CX97	160 aa		4.86	□□□□□ -1.63
HCR1	YLR192C	YPR204C-A	P0CX98	160 aa		4.86	□□□□□ -1.63
HCR1	YLR192C	FUS3	P16892	353 aa	Known RBP	4.86	□□□□□ -1.63
HCR1	YLR192C	IFM1	P25038	676 aa		4.86	□□□□□ -1.63
HCR1	YLR192C	COQ3	P27680	312 aa		4.86	□□□□□ -1.63
HCR1	YLR192C	TRR1	P29509	319 aa	Known RBP	4.86	□□□□□ -1.63
HCR1	YLR192C	VMA5	P31412	392 aa	Known RBP	4.86	□□□□□ -1.63
HCR1	YLR192C	AFG1	P32317	509 aa		4.86	□□□□□ -1.63
HCR1	YLR192C	FMT1	P32785	401 aa		4.86	□□□□□ -1.63
HCR1	YLR192C	YBL010C	P32788	280 aa		4.86	□□□□□ -1.63
HCR1	YLR192C	LSM12	P38828	187 aa	Known RBP	4.86	□□□□□ -1.63
HCR1	YLR192C	GPI16	P38875	610 aa		4.86	□□□□□ -1.63
HCR1	YLR192C	GCV3	P39726	170 aa	Predicted RBP	4.86	□□□□□ -1.63
HCR1	YLR192C	RPL13B	P40212	199 aa	Known RBP	4.86	□□□□□ -1.63
HCR1	YLR192C	YIL024C	P40543	189 aa		4.86	□□□□□ -1.63
HCR1	YLR192C	GLR1	P41921	483 aa	Known RBP	4.86	□□□□□ -1.63
HCR1	YLR192C	GNA1	P43577	159 aa	Predicted RBP	4.86	□□□□□ -1.63
HCR1	YLR192C	NIF3	P53081	288 aa		4.86	□□□□□ -1.63
HCR1	YLR192C	RNH201	P53942	307 aa		4.86	□□□□□ -1.63
HCR1	YLR192C	YDR248C	Q03786	193 aa		4.86	□□□□□ -1.63
HCR1	YLR192C	SYM1	Q06563	197 aa		4.86	□□□□□ -1.63
HCR1	YLR192C	SCP1	Q08873	200 aa		4.86	□□□□□ -1.63
HCR1	YLR192C	USB1	Q12208	290 aa	Known RBP	4.86	□□□□□ -1.63
HCR1	YLR192C	VAM3	Q12241	283 aa		4.86	□□□□□ -1.63
HCR1	YLR192C	COX17	Q12287	69 aa		4.86	□□□□□ -1.63
HCR1	YLR192C	ISA2	Q12425	185 aa		4.86	□□□□□ -1.63
HCR1	YLR192C	RPL13A	Q12690	199 aa	Predicted RBP	4.86	□□□□□ -1.63
HCR1	YLR192C	YHR213W-A	Q8TGT4	77 aa		4.86	□□□□□ -1.63
HCR1	YLR192C	ISN1	Q99312	450 aa		4.86	□□□□□ -1.63
HCR1	YLR192C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	4.85	□□□□□ -1.63	not detected
HCR1	YLR192C	SGA1	P08019	549 aa		4.85	□□□□□ -1.63
HCR1	YLR192C	LAC1	P28496	418 aa		4.85	□□□□□ -1.63
HCR1	YLR192C	ERG3	P32353	365 aa		4.85	□□□□□ -1.63
HCR1	YLR192C	ARO4	P32449	370 aa	Known RBP	4.85	□□□□□ -1.63
HCR1	YLR192C	SRB6	P32570	121 aa		4.85	□□□□□ -1.63
HCR1	YLR192C	VMA8	P32610	256 aa	Known RBP	4.85	□□□□□ -1.63
HCR1	YLR192C	CBT1	P36038	271 aa	Predicted RBP	4.85	□□□□□ -1.63
HCR1	YLR192C	POP8	P38208	133 aa		4.85	□□□□□ -1.63
HCR1	YLR192C	MTC6	P38849	526 aa		4.85	□□□□□ -1.63
HCR1	YLR192C	ASP1	P38986	381 aa	Predicted RBP	4.85	□□□□□ -1.63
HCR1	YLR192C	OKP1	P53298	406 aa		4.85	□□□□□ -1.63
HCR1	YLR192C	ALG9	P53868	555 aa	Known RBP	4.85	□□□□□ -1.63
HCR1	YLR192C	ACT1	P60010	375 aa	Known RBP	4.85	□□□□□ -1.63
HCR1	YLR192C	RCE1	Q03530	315 aa		4.85	□□□□□ -1.63
HCR1	YLR192C	CAB5	Q03941	241 aa		4.85	□□□□□ -1.63
HCR1	YLR192C	TFC7	Q12415	435 aa		4.85	□□□□□ -1.63
HCR1	YLR192C	HEM4	P06174	275 aa		4.84	□□□□□ -1.63
HCR1	YLR192C	RPL30	P14120	105 aa	Known RBP	4.84	□□□□□ -1.63
HCR1	YLR192C	FLO5	P38894	1075 aa		4.84	□□□□□ -1.63
HCR1	YLR192C	SEN34	P39707	275 aa		4.84	□□□□□ -1.63
HCR1	YLR192C	LSM4	P40070	187 aa	Known RBP	4.84	□□□□□ -1.63
HCR1	YLR192C	YIR035C	P40579	254 aa		4.84	□□□□□ -1.63
HCR1	YLR192C	CTK2	P46962	323 aa		4.84	□□□□□ -1.63
HCR1	YLR192C	YJL016W	P47072	561 aa		4.84	□□□□□ -1.63
HCR1	YLR192C	AVT4	P50944	713 aa		4.84	□□□□□ -1.63
HCR1	YLR192C	YIP5	P53108	310 aa		4.84	□□□□□ -1.63
HCR1	YLR192C	PNC1	P53184	216 aa	Known RBP	4.84	□□□□□ -1.63
HCR1	YLR192C	YNR048W	P53740	393 aa		4.84	□□□□□ -1.63
HCR1	YLR192C	RTT103	Q05543	409 aa		4.84	□□□□□ -1.63
HCR1	YLR192C	MRX9	Q07349	420 aa	Known RBP	4.84	□□□□□ -1.63
HCR1	YLR192C	FCF2	Q12035	217 aa	Predicted RBP	4.84	□□□□□ -1.63
HCR1	YLR192C	EAF3	Q12432	401 aa		4.84	□□□□□ -1.63
HCR1	YLR192C	ERP4	Q12450	207 aa		4.84	□□□□□ -1.63
HCR1	YLR192C	COX5B	P00425	151 aa		4.83	□□□□□ -1.64
HCR1	YLR192C	TPI1	P00942	248 aa	Known RBP	4.83	□□□□□ -1.64
HCR1	YLR192C	MES1	P00958	751 aa	Known RBP	4.83	□□□□□ -1.64
HCR1	YLR192C	SPS4	P09937	338 aa		4.83	□□□□□ -1.64
HCR1	YLR192C	ZRC1	P20107	442 aa		4.83	□□□□□ -1.64
HCR1	YLR192C	SEC22	P22214	214 aa		4.83	□□□□□ -1.64
HCR1	YLR192C	TIP1	P27654	210 aa	Predicted RBP	4.83	□□□□□ -1.64
HCR1	YLR192C	LDS1	P31379	325 aa		4.83	□□□□□ -1.64
HCR1	YLR192C	EMP24	P32803	203 aa	Known RBP	4.83	□□□□□ -1.64
HCR1	YLR192C	YHL037C	P38733	133 aa		4.83	□□□□□ -1.64
HCR1	YLR192C	YER084W	P40057	128 aa		4.83	□□□□□ -1.64
HCR1	YLR192C	MOB2	P43563	287 aa		4.83	□□□□□ -1.64
HCR1	YLR192C	YJR011C	P47086	261 aa	Predicted RBP	4.83	□□□□□ -1.64
HCR1	YLR192C	YJR111C	P47148	283 aa	Known RBP	4.83	□□□□□ -1.64
HCR1	YLR192C	SIP18	P50263	79 aa		4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 92 ms