RNA–Protein interactions for RNA: YKR002W

PAP1, Transcript of Poly(A) polymerase, yeast

Gene PAP1, Length 1,707 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAP1	YKR002W	CRZ1	P53968	678 aa		4.75	□□□□□ -1.65
PAP1	YKR002W	TIR4	Q12218	487 aa	Predicted RBP	4.75	□□□□□ -1.65
PAP1	YKR002W	RAD10	P06838	210 aa		4.75	□□□□□ -1.65
PAP1	YKR002W	SPT15	P13393	240 aa	Known RBP	4.75	□□□□□ -1.65
PAP1	YKR002W	POP8	P38208	133 aa		4.75	□□□□□ -1.65
PAP1	YKR002W	YBR285W	P38354	144 aa		4.75	□□□□□ -1.65
PAP1	YKR002W	COG3	P40094	801 aa		4.75	□□□□□ -1.65
PAP1	YKR002W	YGR026W	P53217	278 aa		4.75	□□□□□ -1.65
PAP1	YKR002W	YNL046W	P53956	172 aa		4.75	□□□□□ -1.65
PAP1	YKR002W	MRX11	Q03079	207 aa		4.75	□□□□□ -1.65
PAP1	YKR002W	RUB1	Q03919	77 aa		4.75	□□□□□ -1.65
PAP1	YKR002W	ATP14	Q12349	124 aa		4.75	□□□□□ -1.65
PAP1	YKR002W	MET2	P08465	486 aa		4.74	□□□□□ -1.65
PAP1	YKR002W	RRG9	P40156	214 aa		4.74	□□□□□ -1.65
PAP1	YKR002W	YFL064C	P43540	174 aa		4.74	□□□□□ -1.65
PAP1	YKR002W	RNH201	P53942	307 aa		4.74	□□□□□ -1.65
PAP1	YKR002W	YMR244W	Q04018	355 aa		4.74	□□□□□ -1.65
PAP1	YKR002W	YDR115W	Q04598	105 aa		4.74	□□□□□ -1.65
PAP1	YKR002W	YPR147C	Q06522	304 aa	Known RBP	4.74	□□□□□ -1.65
PAP1	YKR002W	RAX2	Q12465	1220 aa		4.74	□□□□□ -1.65
PAP1	YKR002W	YOL163W	P0CF20	169 aa		4.73	□□□□□ -1.65
PAP1	YKR002W	AAT2	P23542	418 aa	Known RBP	4.73	□□□□□ -1.65
PAP1	YKR002W	HMT1	P38074	348 aa		4.73	□□□□□ -1.65
PAP1	YKR002W	RFC2	P40348	353 aa		4.73	□□□□□ -1.65
PAP1	YKR002W	ARO8	P53090	500 aa	Known RBP	4.73	□□□□□ -1.65
PAP1	YKR002W	YGL039W	P53183	348 aa	Known RBP	4.73	□□□□□ -1.65
PAP1	YKR002W	PRM15	Q03262	622 aa		4.73	□□□□□ -1.65
PAP1	YKR002W	PAL1	Q05518	499 aa	Known RBP	4.73	□□□□□ -1.65
PAP1	YKR002W	MSA1	Q08471	629 aa		4.73	□□□□□ -1.65
PAP1	YKR002W	MRX4	Q12467	430 aa		4.73	□□□□□ -1.65
PAP1	YKR002W	YHR139C-A	O13536	103 aa		4.72	□□□□□ -1.65
PAP1	YKR002W	ERD2	P18414	219 aa		4.72	□□□□□ -1.65
PAP1	YKR002W	IMP1	P28627	190 aa		4.72	□□□□□ -1.65
PAP1	YKR002W	DRE2	P36152	348 aa		4.72	□□□□□ -1.65
PAP1	YKR002W	SOL2	P37262	315 aa		4.72	□□□□□ -1.65
PAP1	YKR002W	YIL012W	P40551	113 aa		4.72	□□□□□ -1.65
PAP1	YKR002W	RSM27	P53305	110 aa		4.72	□□□□□ -1.65
PAP1	YKR002W	RCF2	P53721	224 aa		4.72	□□□□□ -1.65
PAP1	YKR002W	PDR17	P53844	350 aa		4.72	□□□□□ -1.65
PAP1	YKR002W	SNO1	Q03144	224 aa		4.72	□□□□□ -1.65
PAP1	YKR002W	YMR317W	Q04893	1140 aa		4.72	□□□□□ -1.65
PAP1	YKR002W	RRP40	Q08285	240 aa	Known RBP	4.72	□□□□□ -1.65
PAP1	YKR002W	YNG1	Q08465	219 aa		4.72	□□□□□ -1.65
PAP1	YKR002W	YPR063C	Q12160	140 aa		4.72	□□□□□ -1.65
PAP1	YKR002W	USB1	Q12208	290 aa	Known RBP	4.72	□□□□□ -1.65
PAP1	YKR002W	TIP20	P33891	701 aa		4.72	□□□□□ -1.65
PAP1	YKR002W	OM14	P38325	134 aa		4.72	□□□□□ -1.65
PAP1	YKR002W	SSH1	P38353	490 aa	Known RBP	4.72	□□□□□ -1.65
PAP1	YKR002W	YKE4	P40544	346 aa		4.72	□□□□□ -1.65
PAP1	YKR002W	MMS2	P53152	137 aa		4.72	□□□□□ -1.65
PAP1	YKR002W	MRH4	P53166	561 aa		4.72	□□□□□ -1.65
PAP1	YKR002W	YNL140C	P53910	189 aa		4.72	□□□□□ -1.65
PAP1	YKR002W	GAL83	Q04739	417 aa		4.72	□□□□□ -1.65
PAP1	YKR002W	YOR186W	Q08560	144 aa		4.72	□□□□□ -1.65
PAP1	YKR002W	YPR202W	Q08993	238 aa		4.72	□□□□□ -1.65
PAP1	YKR002W	CDC28	P00546	298 aa	Known RBP	4.71	□□□□□ -1.66
PAP1	YKR002W	PET54	P10834	293 aa		4.71	□□□□□ -1.66
PAP1	YKR002W	SHE3	P38272	425 aa	Known RBP	4.71	□□□□□ -1.66
PAP1	YKR002W	EFM1	P38732	585 aa		4.71	□□□□□ -1.66
PAP1	YKR002W	NVJ1	P38881	321 aa		4.71	□□□□□ -1.66
PAP1	YKR002W	GIM4	P40005	111 aa	Known RBP	4.71	□□□□□ -1.66
PAP1	YKR002W	PGU1	P47180	361 aa		4.71	□□□□□ -1.66
PAP1	YKR002W	COG5	P53951	403 aa		4.71	□□□□□ -1.66
PAP1	YKR002W	RPL21A	Q02753	160 aa	Known RBP	4.71	□□□□□ -1.66
PAP1	YKR002W	INP1	Q03694	420 aa		4.71	□□□□□ -1.66
PAP1	YKR002W	YMD8	Q03697	442 aa		4.71	□□□□□ -1.66
PAP1	YKR002W	YOR342C	Q12182	319 aa		4.71	□□□□□ -1.66
PAP1	YKR002W	TRM10	Q12400	293 aa		4.71	□□□□□ -1.66
PAP1	YKR002W	COX5A	P00424	153 aa		4.7	□□□□□ -1.66
PAP1	YKR002W	COX4	P04037	155 aa		4.7	□□□□□ -1.66
PAP1	YKR002W	KIN28	P06242	306 aa		4.7	□□□□□ -1.66
PAP1	YKR002W	RSA4	P25382	515 aa	Known RBP	4.7	□□□□□ -1.66
PAP1	YKR002W	ARO2	P28777	376 aa	Known RBP	4.7	□□□□□ -1.66
PAP1	YKR002W	SCM4	P32564	187 aa		4.7	□□□□□ -1.66
PAP1	YKR002W	CAT2	P32796	670 aa	Known RBP	4.7	□□□□□ -1.66
PAP1	YKR002W	POP4	P38336	279 aa		4.7	□□□□□ -1.66
PAP1	YKR002W	RGI1	P40043	161 aa	Predicted RBP	4.7	□□□□□ -1.66
PAP1	YKR002W	DOC1	P53068	250 aa		4.7	□□□□□ -1.66
PAP1	YKR002W	AAH1	P53909	347 aa		4.7	□□□□□ -1.66
PAP1	YKR002W	ACT1	P60010	375 aa	Known RBP	4.7	□□□□□ -1.66
PAP1	YKR002W	SYC1	Q08553	188 aa	Predicted RBP	4.7	□□□□□ -1.66
PAP1	YKR002W	YMR230W-A	Q3E7B5	62 aa		4.7	□□□□□ -1.66
PAP1	YKR002W	PET9	P18239	318 aa	Known RBP	4.69	□□□□□ -1.66
PAP1	YKR002W	OAC1	P32332	324 aa		4.69	□□□□□ -1.66
PAP1	YKR002W	AIM18	P38884	321 aa		4.69	□□□□□ -1.66
PAP1	YKR002W	GGC1	P38988	300 aa		4.69	□□□□□ -1.66
PAP1	YKR002W	YMR144W	P40214	342 aa	Known RBP	4.69	□□□□□ -1.66
PAP1	YKR002W	TIR3	P40552	269 aa		4.69	□□□□□ -1.66
PAP1	YKR002W	MRPL49	P40858	161 aa	Predicted RBP	4.69	□□□□□ -1.66
PAP1	YKR002W	YJR056C	P47115	236 aa		4.69	□□□□□ -1.66
PAP1	YKR002W	CCC1	P47818	322 aa		4.69	□□□□□ -1.66
PAP1	YKR002W	BOR1	P53838	576 aa		4.69	□□□□□ -1.66
PAP1	YKR002W	API2	Q04413	109 aa		4.69	□□□□□ -1.66
PAP1	YKR002W	YML096W	Q04489	525 aa		4.69	□□□□□ -1.66
PAP1	YKR002W	SNF4	P12904	322 aa		4.69	□□□□□ -1.66
PAP1	YKR002W	CCA1	P21269	546 aa		4.69	□□□□□ -1.66
PAP1	YKR002W	SUR2	P38992	349 aa		4.69	□□□□□ -1.66
PAP1	YKR002W	ICE2	P40499	491 aa		4.69	□□□□□ -1.66
PAP1	YKR002W	YIR035C	P40579	254 aa		4.69	□□□□□ -1.66
PAP1	YKR002W	GNA1	P43577	159 aa	Predicted RBP	4.69	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 72.1 ms