RNA–Protein interactions for RNA: YJL041W

NSP1, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeast

Gene NSP1, Length 2,472 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NSP1	YJL041W	PRP18	P33411	251 aa	Predicted RBP	3.13	□□□□□ -1.91
NSP1	YJL041W	ATG12	P38316	186 aa		3.13	□□□□□ -1.91
NSP1	YJL041W	MET30	P39014	640 aa		3.13	□□□□□ -1.91
NSP1	YJL041W	GET2	P40056	285 aa		3.13	□□□□□ -1.91
NSP1	YJL041W	EMC5	P40540	141 aa		3.13	□□□□□ -1.91
NSP1	YJL041W	SMD3	P43321	101 aa	Known RBP	3.13	□□□□□ -1.91
NSP1	YJL041W	TAD2	P47058	250 aa		3.13	□□□□□ -1.91
NSP1	YJL041W	YIP4	P53093	235 aa		3.13	□□□□□ -1.91
NSP1	YJL041W	IGO1	P53897	168 aa		3.13	□□□□□ -1.91
NSP1	YJL041W	GAS3	Q03655	524 aa		3.13	□□□□□ -1.91
NSP1	YJL041W	DPP1	Q05521	289 aa		3.13	□□□□□ -1.91
NSP1	YJL041W	SWC7	Q06707	132 aa		3.13	□□□□□ -1.91
NSP1	YJL041W	TEN1	Q07921	160 aa		3.13	□□□□□ -1.91
NSP1	YJL041W	GPB1	Q08886	897 aa		3.13	□□□□□ -1.91
NSP1	YJL041W	YLR049C	Q12110	428 aa		3.13	□□□□□ -1.91
NSP1	YJL041W	RPL7B	Q12213	244 aa	Known RBP	3.13	□□□□□ -1.91
NSP1	YJL041W	RPS25A	Q3E792	108 aa	Predicted RBP	3.13	□□□□□ -1.91
NSP1	YJL041W	HIS1	P00498	297 aa	Known RBP	3.12	□□□□□ -1.91
NSP1	YJL041W	TPI1	P00942	248 aa	Known RBP	3.12	□□□□□ -1.91
NSP1	YJL041W	CDC21	P06785	304 aa		3.12	□□□□□ -1.91
NSP1	YJL041W	YOL163W	P0CF20	169 aa		3.12	□□□□□ -1.91
NSP1	YJL041W	PPH21	P23594	369 aa		3.12	□□□□□ -1.91
NSP1	YJL041W	ADE1	P27616	306 aa		3.12	□□□□□ -1.91
NSP1	YJL041W	GAC1	P28006	793 aa		3.12	□□□□□ -1.91
NSP1	YJL041W	URA10	P30402	227 aa		3.12	□□□□□ -1.91
NSP1	YJL041W	HXT4	P32467	576 aa		3.12	□□□□□ -1.91
NSP1	YJL041W	SGE1	P33335	543 aa		3.12	□□□□□ -1.91
NSP1	YJL041W	PHD1	P36093	366 aa		3.12	□□□□□ -1.91
NSP1	YJL041W	CBP4	P37267	147 aa		3.12	□□□□□ -1.91
NSP1	YJL041W	ECM33	P38248	429 aa	Known RBP	3.12	□□□□□ -1.91
NSP1	YJL041W	YHR033W	P38690	423 aa		3.12	□□□□□ -1.91
NSP1	YJL041W	OXA1	P39952	402 aa		3.12	□□□□□ -1.91
NSP1	YJL041W	HPA3	P39979	161 aa		3.12	□□□□□ -1.91
NSP1	YJL041W	PRE5	P40302	234 aa	Known RBP	3.12	□□□□□ -1.91
NSP1	YJL041W	FKH2	P41813	862 aa		3.12	□□□□□ -1.91
NSP1	YJL041W	RPN11	P43588	306 aa	Known RBP	3.12	□□□□□ -1.91
NSP1	YJL041W	AIM25	P47140	327 aa		3.12	□□□□□ -1.91
NSP1	YJL041W	ERG26	P53199	349 aa	Known RBP	3.12	□□□□□ -1.91
NSP1	YJL041W	RHO4	Q00246	291 aa		3.12	□□□□□ -1.91
NSP1	YJL041W	YMR087W	Q04299	284 aa		3.12	□□□□□ -1.91
NSP1	YJL041W	HNT1	Q04344	158 aa	Known RBP	3.12	□□□□□ -1.91
NSP1	YJL041W	INM2	Q05533	292 aa		3.12	□□□□□ -1.91
NSP1	YJL041W	PAM18	Q07914	168 aa		3.12	□□□□□ -1.91
NSP1	YJL041W	AIM39	Q08223	395 aa		3.12	□□□□□ -1.91
NSP1	YJL041W	HSP33	Q08914	237 aa	Known RBP	3.12	□□□□□ -1.91
NSP1	YJL041W	RDI1	Q12434	202 aa		3.12	□□□□□ -1.91
NSP1	YJL041W	YKL023C-A	Q2V2P3	75 aa		3.12	□□□□□ -1.91
NSP1	YJL041W	ISD11	Q6Q560	94 aa		3.12	□□□□□ -1.91
NSP1	YJL041W	COX3	P00420	269 aa		3.12	□□□□□ -1.91
NSP1	YJL041W	HEM4	P06174	275 aa		3.12	□□□□□ -1.91
NSP1	YJL041W	YLL053C	P0CD98	152 aa		3.12	□□□□□ -1.91
NSP1	YJL041W	KRE1	P17260	313 aa		3.12	□□□□□ -1.91
NSP1	YJL041W	YBL029W	P38201	376 aa		3.12	□□□□□ -1.91
NSP1	YJL041W	YER121W	P40076	114 aa		3.12	□□□□□ -1.91
NSP1	YJL041W	LRO1	P40345	661 aa		3.12	□□□□□ -1.91
NSP1	YJL041W	YGL262W	P53054	175 aa		3.12	□□□□□ -1.91
NSP1	YJL041W	YNR064C	P53750	290 aa		3.12	□□□□□ -1.91
NSP1	YJL041W	EFM6	P53970	246 aa		3.12	□□□□□ -1.91
NSP1	YJL041W	ASI3	P53983	676 aa		3.12	□□□□□ -1.91
NSP1	YJL041W	UPS3	Q04006	179 aa		3.12	□□□□□ -1.91
NSP1	YJL041W	UPS1	Q05776	175 aa		3.12	□□□□□ -1.91
NSP1	YJL041W	HRI1	Q05905	244 aa	Known RBP	3.12	□□□□□ -1.91
NSP1	YJL041W	LIP2	Q06005	328 aa		3.12	□□□□□ -1.91
NSP1	YJL041W	DFM1	Q12743	341 aa	Known RBP	3.12	□□□□□ -1.91
NSP1	YJL041W	FKS3	Q04952	1785 aa		3.12	□□□□□ -1.91
NSP1	YJL041W	MAK31	P23059	88 aa		3.11	□□□□□ -1.91
NSP1	YJL041W	TKL1	P23254	680 aa	Known RBP	3.11	□□□□□ -1.91
NSP1	YJL041W	NTH1	P32356	751 aa		3.11	□□□□□ -1.91
NSP1	YJL041W	COX13	P32799	129 aa		3.11	□□□□□ -1.91
NSP1	YJL041W	TMA19	P35691	167 aa	Known RBP	3.11	□□□□□ -1.91
NSP1	YJL041W	YBR292C	P38357	123 aa		3.11	□□□□□ -1.91
NSP1	YJL041W	YER188W	P40103	239 aa		3.11	□□□□□ -1.91
NSP1	YJL041W	PRM5	P40476	318 aa		3.11	□□□□□ -1.91
NSP1	YJL041W	APQ12	P40532	138 aa		3.11	□□□□□ -1.91
NSP1	YJL041W	YGR164W	P53291	111 aa		3.11	□□□□□ -1.91
NSP1	YJL041W	VBA1	Q04301	562 aa		3.11	□□□□□ -1.91
NSP1	YJL041W	YMR090W	Q04304	227 aa	Known RBP	3.11	□□□□□ -1.91
NSP1	YJL041W	DCI1	Q08558	271 aa		3.11	□□□□□ -1.91
NSP1	YJL041W	FCY1	Q12178	158 aa		3.11	□□□□□ -1.91
NSP1	YJL041W	VAR1	P02381	398 aa		3.11	□□□□□ -1.91
NSP1	YJL041W	MSI1	P13712	422 aa		3.11	□□□□□ -1.91
NSP1	YJL041W	CUP2	P15315	225 aa		3.11	□□□□□ -1.91
NSP1	YJL041W	GAS1	P22146	559 aa	Known RBP	3.11	□□□□□ -1.91
NSP1	YJL041W	DCG1	P32460	244 aa		3.11	□□□□□ -1.91
NSP1	YJL041W	YKL070W	P36087	169 aa		3.11	□□□□□ -1.91
NSP1	YJL041W	YMC2	P38087	329 aa		3.11	□□□□□ -1.91
NSP1	YJL041W	YHR130C	P38834	111 aa		3.11	□□□□□ -1.91
NSP1	YJL041W	EAF5	P39995	279 aa		3.11	□□□□□ -1.91
NSP1	YJL041W	PFS2	P42841	465 aa	Known RBP	3.11	□□□□□ -1.91
NSP1	YJL041W	AVT1	P47082	602 aa		3.11	□□□□□ -1.91
NSP1	YJL041W	MIC27	P50945	234 aa		3.11	□□□□□ -1.91
NSP1	YJL041W	YIF1	P53845	314 aa	Known RBP	3.11	□□□□□ -1.91
NSP1	YJL041W	ERG13	P54839	491 aa	Known RBP	3.11	□□□□□ -1.91
NSP1	YJL041W	ROT1	Q03691	256 aa		3.11	□□□□□ -1.91
NSP1	YJL041W	TRI1	Q05024	226 aa		3.11	□□□□□ -1.91
NSP1	YJL041W	SEI1	Q06058	285 aa		3.11	□□□□□ -1.91
NSP1	YJL041W	PFA4	Q12006	378 aa		3.11	□□□□□ -1.91
NSP1	YJL041W	LAS17	Q12446	633 aa		3.11	□□□□□ -1.91
NSP1	YJL041W	BOL1	Q3E793	110 aa		3.11	□□□□□ -1.91
NSP1	YJL041W	YEL009C-A	A0A023PZF2	135 aa		3.1	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 32.8 ms