RNA–Protein interactions for RNA: YIL148W

RPL40A, Transcript of Ubiquitin-ribosomal 60S subunit protein L40A fusion protein, yeastyeast

Gene RPL40A, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40AYIL148W ADF1Q2V2Q1 113 aa1.41□□□□□ -2.18
RPL40AYIL148W YDR157WA0A023PZE8 133 aa1.4□□□□□ -2.19
RPL40AYIL148W GRX2P17695 143 aaKnown RBP1.4□□□□□ -2.19
RPL40AYIL148W YCR087C-AP37263 153 aa1.4□□□□□ -2.19
RPL40AYIL148W NRG2P38082 220 aa1.4□□□□□ -2.19
RPL40AYIL148W IRC22P40006 225 aa1.4□□□□□ -2.19
RPL40AYIL148W PGD1P40356 397 aa1.4□□□□□ -2.19
RPL40AYIL148W YKE4P40544 346 aa1.4□□□□□ -2.19
RPL40AYIL148W DAN1P47178 298 aa1.4□□□□□ -2.19
RPL40AYIL148W GET1P53192 235 aa1.4□□□□□ -2.19
RPL40AYIL148W IGO1P53897 168 aa1.4□□□□□ -2.19
RPL40AYIL148W GIM3P53900 129 aa1.4□□□□□ -2.19
RPL40AYIL148W YNL010WP53981 241 aaKnown RBP1.4□□□□□ -2.19
RPL40AYIL148W MRPS8Q03799 155 aa1.4□□□□□ -2.19
RPL40AYIL148W MEU1Q07938 337 aaKnown RBP RIP-Chip data1.4□□□□□ -2.19not detected
RPL40AYIL148W USB1Q12208 290 aaKnown RBP1.4□□□□□ -2.19
RPL40AYIL148W TSC3Q3E790 80 aa1.4□□□□□ -2.19
RPL40AYIL148W BOL1Q3E793 110 aa1.4□□□□□ -2.19
RPL40AYIL148W YPL229WQ99395 206 aa1.4□□□□□ -2.19
RPL40AYIL148W YLR156WP0CE96 114 aa1.39□□□□□ -2.19
RPL40AYIL148W YLR159WP0CE97 114 aa1.39□□□□□ -2.19
RPL40AYIL148W YLR161WP0CE98 114 aa1.39□□□□□ -2.19
RPL40AYIL148W SPS18P32572 300 aa1.39□□□□□ -2.19
RPL40AYIL148W PHO88P38264 188 aaPredicted RBP1.39□□□□□ -2.19
RPL40AYIL148W RPL33BP41056 107 aaKnown RBP1.39□□□□□ -2.19
RPL40AYIL148W PRM10P42946 383 aa1.39□□□□□ -2.19
RPL40AYIL148W FUS2Q05670 677 aa1.39□□□□□ -2.19
RPL40AYIL148W ARR2Q06597 130 aa1.39□□□□□ -2.19
RPL40AYIL148W PSF1Q12488 208 aa1.39□□□□□ -2.19
RPL40AYIL148W YHR086W-AQ3E746 53 aa1.39□□□□□ -2.19
RPL40AYIL148W YIL177CP40434 1758 aa1.39□□□□□ -2.19
RPL40AYIL148W YJL225CP40889 1758 aa1.39□□□□□ -2.19
RPL40AYIL148W URA5P13298 226 aaKnown RBP1.38□□□□□ -2.19
RPL40AYIL148W KSS1P14681 368 aa1.38□□□□□ -2.19
RPL40AYIL148W MER1P16523 270 aa1.38□□□□□ -2.19
RPL40AYIL148W CKS1P20486 150 aaKnown RBP1.38□□□□□ -2.19
RPL40AYIL148W BET1P22804 142 aa1.38□□□□□ -2.19
RPL40AYIL148W RFA3P26755 122 aaKnown RBP1.38□□□□□ -2.19
RPL40AYIL148W SNC2P33328 115 aa1.38□□□□□ -2.19
RPL40AYIL148W CTR2P38865 189 aa1.38□□□□□ -2.19
RPL40AYIL148W BMT5P40493 336 aa1.38□□□□□ -2.19
RPL40AYIL148W SMD3P43321 101 aaKnown RBP1.38□□□□□ -2.19
RPL40AYIL148W ABP140Q08641 628 aaKnown RBP1.38□□□□□ -2.19
RPL40AYIL148W YPL162CQ12042 273 aa1.38□□□□□ -2.19
RPL40AYIL148W YHR214C-EQ8TGK0 99 aa1.38□□□□□ -2.19
RPL40AYIL148W TUS1Q06412 1307 aa1.38□□□□□ -2.19
RPL40AYIL148W YHR139C-AO13536 103 aa1.37□□□□□ -2.19
RPL40AYIL148W REP2P03872 296 aa1.37□□□□□ -2.19
RPL40AYIL148W CDC7P06243 507 aa1.37□□□□□ -2.19
RPL40AYIL148W PET9P18239 318 aaKnown RBP1.37□□□□□ -2.19
RPL40AYIL148W SCL1P21243 252 aaKnown RBP1.37□□□□□ -2.19
RPL40AYIL148W MAG1P22134 296 aaKnown RBP1.37□□□□□ -2.19
RPL40AYIL148W TAF14P35189 244 aa1.37□□□□□ -2.19
RPL40AYIL148W YET1P35723 206 aa1.37□□□□□ -2.19
RPL40AYIL148W YHR022CP38763 256 aa1.37□□□□□ -2.19
RPL40AYIL148W AIM2P39721 246 aa1.37□□□□□ -2.19
RPL40AYIL148W HMF1P40037 129 aaKnown RBP1.37□□□□□ -2.19
RPL40AYIL148W TIR3P40552 269 aa1.37□□□□□ -2.19
RPL40AYIL148W AIM25P47140 327 aa1.37□□□□□ -2.19
RPL40AYIL148W MMS2P53152 137 aa1.37□□□□□ -2.19
RPL40AYIL148W YNR062CP53748 327 aa1.37□□□□□ -2.19
RPL40AYIL148W LSM7P53905 115 aaKnown RBP1.37□□□□□ -2.19
RPL40AYIL148W CYT2Q00873 224 aa1.37□□□□□ -2.19
RPL40AYIL148W SWP1Q02795 286 aa1.37□□□□□ -2.19
RPL40AYIL148W MET5P47169 1442 aa1.37□□□□□ -2.19
RPL40AYIL148W RAD9P14737 1309 aa1.37□□□□□ -2.19
RPL40AYIL148W DSE2P38844 325 aa1.36□□□□□ -2.19
RPL40AYIL148W YHR180WP38868 163 aa1.36□□□□□ -2.19
RPL40AYIL148W PEP8P40335 379 aa1.36□□□□□ -2.19
RPL40AYIL148W ICE2P40499 491 aa1.36□□□□□ -2.19
RPL40AYIL148W YRB2P40517 327 aa1.36□□□□□ -2.19
RPL40AYIL148W YJL027CP47063 138 aaPredicted RBP1.36□□□□□ -2.19
RPL40AYIL148W EAF6P47128 113 aa1.36□□□□□ -2.19
RPL40AYIL148W HOP2P53187 214 aa1.36□□□□□ -2.19
RPL40AYIL148W TRM12Q04235 462 aa1.36□□□□□ -2.19
RPL40AYIL148W TIM9O74700 87 aa1.35□□□□□ -2.19
RPL40AYIL148W YPK2P18961 677 aa1.35□□□□□ -2.19
RPL40AYIL148W MDH2P22133 377 aa1.35□□□□□ -2.19
RPL40AYIL148W MEI4P29467 408 aa1.35□□□□□ -2.19
RPL40AYIL148W TCA17P32613 152 aa1.35□□□□□ -2.19
RPL40AYIL148W MRPL17P36528 281 aa1.35□□□□□ -2.19
RPL40AYIL148W UMP1P38293 148 aa1.35□□□□□ -2.19
RPL40AYIL148W YNL217WP40152 326 aa1.35□□□□□ -2.19
RPL40AYIL148W AGE2P40529 298 aa1.35□□□□□ -2.19
RPL40AYIL148W GVP36P40531 326 aaKnown RBP1.35□□□□□ -2.19
RPL40AYIL148W SAY1P53324 424 aa1.35□□□□□ -2.19
RPL40AYIL148W BUD25P85052 153 aa1.35□□□□□ -2.19
RPL40AYIL148W GGA1Q06336 557 aa1.35□□□□□ -2.19
RPL40AYIL148W YOL160WQ08321 113 aa1.35□□□□□ -2.19
RPL40AYIL148W IKI3Q06706 1349 aaKnown RBP1.35□□□□□ -2.19
RPL40AYIL148W SIR2P06700 562 aa1.34□□□□□ -2.19
RPL40AYIL148W SEC4P07560 215 aaKnown RBP1.34□□□□□ -2.19
RPL40AYIL148W CAF4P36130 643 aa1.34□□□□□ -2.19
RPL40AYIL148W GLE2P40066 365 aa1.34□□□□□ -2.19
RPL40AYIL148W AYR1P40471 297 aa1.34□□□□□ -2.19
RPL40AYIL148W YFR054CP43622 192 aa1.34□□□□□ -2.19
RPL40AYIL148W YGR050CP53231 118 aa1.34□□□□□ -2.19
RPL40AYIL148W RTC4P53850 401 aa1.34□□□□□ -2.19
RPL40AYIL148W COG5P53951 403 aa1.34□□□□□ -2.19
RPL40AYIL148W SPG3Q04398 127 aaPredicted RBP1.34□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 34.8 ms