RNA–Protein interactions for RNA: YDR494W

RSM28, Transcript of Mitochondrial ribosomal protein of the small subunit, yeastyeast

Gene RSM28, Length 1,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RSM28YDR494W FAR7P43592 221 aa1.45□□□□□ -2.18
RSM28YDR494W GAS3Q03655 524 aa1.45□□□□□ -2.18
RSM28YDR494W YLR162WQ06235 118 aa1.45□□□□□ -2.18
RSM28YDR494W YET1P35723 206 aa1.44□□□□□ -2.18
RSM28YDR494W SKG1P36169 355 aa1.44□□□□□ -2.18
RSM28YDR494W YBR220CP38318 560 aa1.44□□□□□ -2.18
RSM28YDR494W GLE2P40066 365 aa1.44□□□□□ -2.18
RSM28YDR494W RTR1P40084 226 aaPredicted RBP1.44□□□□□ -2.18
RSM28YDR494W NUP57P48837 541 aa1.44□□□□□ -2.18
RSM28YDR494W DOC1P53068 250 aa1.44□□□□□ -2.18
RSM28YDR494W MET5P47169 1442 aa1.43□□□□□ -2.18
RSM28YDR494W FPR1P20081 114 aaKnown RBP1.43□□□□□ -2.18
RSM28YDR494W APS1P35181 156 aa1.43□□□□□ -2.18
RSM28YDR494W RPL13BP40212 199 aaKnown RBP1.43□□□□□ -2.18
RSM28YDR494W NUP49Q02199 472 aa1.43□□□□□ -2.18
RSM28YDR494W SWP1Q02795 286 aa1.43□□□□□ -2.18
RSM28YDR494W RPL13AQ12690 199 aaPredicted RBP1.43□□□□□ -2.18
RSM28YDR494W TSC3Q3E790 80 aa1.43□□□□□ -2.18
RSM28YDR494W SEY1Q99287 776 aa1.43□□□□□ -2.18
RSM28YDR494W YBR121C-AP0C5L4 52 aa1.42□□□□□ -2.18
RSM28YDR494W NHP6BP11633 99 aaKnown RBP1.42□□□□□ -2.18
RSM28YDR494W MRPL17P36528 281 aa1.42□□□□□ -2.18
RSM28YDR494W UMP1P38293 148 aa1.42□□□□□ -2.18
RSM28YDR494W TCD1P38756 429 aa1.42□□□□□ -2.18
RSM28YDR494W RTC3P38804 111 aaPredicted RBP1.42□□□□□ -2.18
RSM28YDR494W OTU1P43558 301 aa1.42□□□□□ -2.18
RSM28YDR494W YNR077CP53758 84 aa1.42□□□□□ -2.18
RSM28YDR494W MZM1Q03429 123 aaPredicted RBP1.42□□□□□ -2.18
RSM28YDR494W YKL183C-AQ3E765 70 aa1.42□□□□□ -2.18
RSM28YDR494W TUS1Q06412 1307 aa1.41□□□□□ -2.18
RSM28YDR494W CYR1P08678 2026 aaKnown RBP1.41□□□□□ -2.18
RSM28YDR494W TIM9O74700 87 aa1.41□□□□□ -2.18
RSM28YDR494W RPL2AP0CX45 254 aaKnown RBP1.41□□□□□ -2.18
RSM28YDR494W RPL2BP0CX46 254 aaKnown RBP1.41□□□□□ -2.18
RSM28YDR494W SNC2P33328 115 aa1.41□□□□□ -2.18
RSM28YDR494W GAA1P39012 614 aa1.41□□□□□ -2.18
RSM28YDR494W RMD6P39975 231 aa1.41□□□□□ -2.18
RSM28YDR494W SAY1P53324 424 aa1.41□□□□□ -2.18
RSM28YDR494W JLP1Q12358 412 aa1.41□□□□□ -2.18
RSM28YDR494W PDR18P53756 1333 aa1.4□□□□□ -2.18
RSM28YDR494W GPA2P10823 449 aa1.4□□□□□ -2.19
RSM28YDR494W PBN1P25580 416 aa1.4□□□□□ -2.19
RSM28YDR494W TCA17P32613 152 aa1.4□□□□□ -2.19
RSM28YDR494W TMA19P35691 167 aaKnown RBP1.4□□□□□ -2.19
RSM28YDR494W ERG28P40030 148 aa1.4□□□□□ -2.19
RSM28YDR494W YRB1P41920 201 aaKnown RBP1.4□□□□□ -2.19
RSM28YDR494W EAF6P47128 113 aa1.4□□□□□ -2.19
RSM28YDR494W ADO1P47143 340 aaKnown RBP1.4□□□□□ -2.19
RSM28YDR494W MCP1Q12106 302 aa1.4□□□□□ -2.19
RSM28YDR494W STE18P18852 110 aa1.39□□□□□ -2.19
RSM28YDR494W SEC17P32602 292 aa1.39□□□□□ -2.19
RSM28YDR494W UPS2P35200 230 aa1.39□□□□□ -2.19
RSM28YDR494W CBT1P36038 271 aaPredicted RBP1.39□□□□□ -2.19
RSM28YDR494W UTP30P36144 274 aaKnown RBP1.39□□□□□ -2.19
RSM28YDR494W AST2P39945 430 aaKnown RBP1.39□□□□□ -2.19
RSM28YDR494W YNL194CP40169 301 aa1.39□□□□□ -2.19
RSM28YDR494W GVP36P40531 326 aaKnown RBP1.39□□□□□ -2.19
RSM28YDR494W MGA1P53050 456 aa1.39□□□□□ -2.19
RSM28YDR494W ANT1Q06497 328 aa1.39□□□□□ -2.19
RSM28YDR494W QCR8P08525 94 aa1.38□□□□□ -2.19
RSM28YDR494W GCN3P14741 305 aa1.38□□□□□ -2.19
RSM28YDR494W COQ1P18900 473 aa1.38□□□□□ -2.19
RSM28YDR494W RAD17P48581 401 aa1.38□□□□□ -2.19
RSM28YDR494W GPM2Q12008 311 aa1.38□□□□□ -2.19
RSM28YDR494W FSF1Q12029 327 aaKnown RBP1.38□□□□□ -2.19
RSM28YDR494W YPL162CQ12042 273 aa1.38□□□□□ -2.19
RSM28YDR494W YIL177CP40434 1758 aa1.37□□□□□ -2.19
RSM28YDR494W YJL225CP40889 1758 aa1.37□□□□□ -2.19
RSM28YDR494W KSS1P14681 368 aa1.37□□□□□ -2.19
RSM28YDR494W IDH1P28834 360 aaKnown RBP RIP-Chip data1.37□□□□□ -2.19not detected
RSM28YDR494W TFC1P32367 649 aa1.37□□□□□ -2.19
RSM28YDR494W MGM101P32787 269 aaKnown RBP1.37□□□□□ -2.19
RSM28YDR494W PTM1P32857 523 aa1.37□□□□□ -2.19
RSM28YDR494W PRP18P33411 251 aaPredicted RBP1.37□□□□□ -2.19
RSM28YDR494W YBR209WP38311 105 aa1.37□□□□□ -2.19
RSM28YDR494W SIP3P38717 1229 aa1.37□□□□□ -2.19
RSM28YDR494W MSS2P40990 351 aa1.37□□□□□ -2.19
RSM28YDR494W ERJ5P43613 295 aaPredicted RBP1.37□□□□□ -2.19
RSM28YDR494W PDR17P53844 350 aa1.37□□□□□ -2.19
RSM28YDR494W RIO1Q12196 484 aaKnown RBP1.37□□□□□ -2.19
RSM28YDR494W RUD3Q12234 484 aaKnown RBP1.37□□□□□ -2.19
RSM28YDR494W YHR214C-EQ8TGK0 99 aa1.37□□□□□ -2.19
RSM28YDR494W NCB2Q92317 146 aa1.37□□□□□ -2.19
RSM28YDR494W URA5P13298 226 aaKnown RBP1.36□□□□□ -2.19
RSM28YDR494W BET1P22804 142 aa1.36□□□□□ -2.19
RSM28YDR494W PRX1P34227 261 aaKnown RBP1.36□□□□□ -2.19
RSM28YDR494W IRC18P47056 224 aa1.36□□□□□ -2.19
RSM28YDR494W YGR050CP53231 118 aa1.36□□□□□ -2.19
RSM28YDR494W YDR157WA0A023PZE8 133 aa1.35□□□□□ -2.19
RSM28YDR494W CDC33P07260 213 aaKnown RBP1.35□□□□□ -2.19
RSM28YDR494W SEC4P07560 215 aaKnown RBP1.35□□□□□ -2.19
RSM28YDR494W YBR285WP38354 144 aa1.35□□□□□ -2.19
RSM28YDR494W GCN20P43535 752 aaKnown RBP1.35□□□□□ -2.19
RSM28YDR494W CWC23P52868 283 aaPredicted RBP1.35□□□□□ -2.19
RSM28YDR494W YDR249CQ03787 373 aa1.35□□□□□ -2.19
RSM28YDR494W ATG40Q99325 256 aa1.35□□□□□ -2.19
RSM28YDR494W RPL25P04456 142 aaKnown RBP1.34□□□□□ -2.19
RSM28YDR494W CPA1P07258 411 aaKnown RBP1.34□□□□□ -2.19
RSM28YDR494W KNH1P50112 268 aa1.34□□□□□ -2.19
RSM28YDR494W POP3P53833 195 aaPredicted RBP1.34□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 8.1 ms