RNA–Protein interactions for RNA: YDR485C

VPS72, Transcript of Htz1p-binding component of the SWR1 complex, yeast

Gene VPS72, Length 2,388 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS72	YDR485C	AAT2	P23542	418 aa	Known RBP	4.62	□□□□□ -1.67
VPS72	YDR485C	SEC14	P24280	304 aa	Known RBP	4.62	□□□□□ -1.67
VPS72	YDR485C	PTH1	P38876	190 aa	Known RBP	4.62	□□□□□ -1.67
VPS72	YDR485C	GGC1	P38988	300 aa		4.62	□□□□□ -1.67
VPS72	YDR485C	YER189W	P40104	122 aa		4.62	□□□□□ -1.67
VPS72	YDR485C	PGU1	P47180	361 aa		4.62	□□□□□ -1.67
VPS72	YDR485C	YGL262W	P53054	175 aa		4.62	□□□□□ -1.67
VPS72	YDR485C	ARO8	P53090	500 aa	Known RBP	4.62	□□□□□ -1.67
VPS72	YDR485C	DGA1	Q08650	418 aa		4.62	□□□□□ -1.67
VPS72	YDR485C	NIP7	Q08962	181 aa	Known RBP	4.62	□□□□□ -1.67
VPS72	YDR485C	MRPS28	P21771	286 aa		4.61	□□□□□ -1.67
VPS72	YDR485C	RPB9	P27999	122 aa		4.61	□□□□□ -1.67
VPS72	YDR485C	MSA2	P36157	363 aa		4.61	□□□□□ -1.67
VPS72	YDR485C	TVP38	P36164	337 aa		4.61	□□□□□ -1.67
VPS72	YDR485C	CSH1	P38287	376 aa		4.61	□□□□□ -1.67
VPS72	YDR485C	MIG3	P39943	394 aa		4.61	□□□□□ -1.67
VPS72	YDR485C	AST2	P39945	430 aa	Known RBP	4.61	□□□□□ -1.67
VPS72	YDR485C	YDR249C	Q03787	373 aa		4.61	□□□□□ -1.67
VPS72	YDR485C	TSA2	Q04120	196 aa		4.61	□□□□□ -1.67
VPS72	YDR485C	MRX8	Q05473	314 aa		4.61	□□□□□ -1.67
VPS72	YDR485C	WIP1	Q2V2P8	89 aa		4.61	□□□□□ -1.67
VPS72	YDR485C	TDA8	Q6B2U8	126 aa		4.61	□□□□□ -1.67
VPS72	YDR485C	YFR032C-B	Q8TGU2	87 aa		4.61	□□□□□ -1.67
VPS72	YDR485C	PRS3	P38689	320 aa	Known RBP	4.61	□□□□□ -1.67
VPS72	YDR485C	YHI9	P38765	294 aa		4.61	□□□□□ -1.67
VPS72	YDR485C	SYS1	P41544	203 aa		4.61	□□□□□ -1.67
VPS72	YDR485C	ILM1	P47155	203 aa		4.61	□□□□□ -1.67
VPS72	YDR485C	ATG22	P25568	528 aa		4.6	□□□□□ -1.67
VPS72	YDR485C	UTP30	P36144	274 aa	Known RBP	4.6	□□□□□ -1.67
VPS72	YDR485C	PGA1	P53896	198 aa		4.6	□□□□□ -1.67
VPS72	YDR485C	GRH1	Q04410	372 aa	Known RBP	4.6	□□□□□ -1.67
VPS72	YDR485C	MPD1	Q12404	318 aa	Known RBP	4.6	□□□□□ -1.67
VPS72	YDR485C	DFM1	Q12743	341 aa	Known RBP	4.6	□□□□□ -1.67
VPS72	YDR485C	RPL2A	P0CX45	254 aa	Known RBP	4.6	□□□□□ -1.67
VPS72	YDR485C	RPL2B	P0CX46	254 aa	Known RBP	4.6	□□□□□ -1.67
VPS72	YDR485C	PET9	P18239	318 aa	Known RBP	4.6	□□□□□ -1.67
VPS72	YDR485C	MAG1	P22134	296 aa	Known RBP	4.6	□□□□□ -1.67
VPS72	YDR485C	RBL2	P48606	106 aa	Known RBP	4.6	□□□□□ -1.67
VPS72	YDR485C	YGL101W	P53144	215 aa		4.6	□□□□□ -1.67
VPS72	YDR485C	LPP1	Q04396	274 aa		4.6	□□□□□ -1.67
VPS72	YDR485C	IRC25	Q07951	179 aa		4.6	□□□□□ -1.67
VPS72	YDR485C	SNX4	P47057	423 aa		4.59	□□□□□ -1.67
VPS72	YDR485C	GAS3	Q03655	524 aa		4.59	□□□□□ -1.67
VPS72	YDR485C	PLP1	Q04004	230 aa		4.59	□□□□□ -1.67
VPS72	YDR485C	SEC17	P32602	292 aa		4.58	□□□□□ -1.68
VPS72	YDR485C	YGP1	P38616	354 aa	Known RBP	4.58	□□□□□ -1.68
VPS72	YDR485C	RPF1	P38805	295 aa	Known RBP	4.58	□□□□□ -1.68
VPS72	YDR485C	RMD6	P39975	231 aa		4.58	□□□□□ -1.68
VPS72	YDR485C	ORM1	P53224	222 aa		4.58	□□□□□ -1.68
VPS72	YDR485C	TIM8	P57744	87 aa		4.58	□□□□□ -1.68
VPS72	YDR485C	YNL162W-A	Q3E7A8	72 aa		4.58	□□□□□ -1.68
VPS72	YDR485C	OM14	P38325	134 aa		4.58	□□□□□ -1.68
VPS72	YDR485C	YER137C	P40083	148 aa	Known RBP	4.58	□□□□□ -1.68
VPS72	YDR485C	UFD1	P53044	361 aa		4.58	□□□□□ -1.68
VPS72	YDR485C	IMP4	P53941	290 aa	Known RBP	4.58	□□□□□ -1.68
VPS72	YDR485C	YPL247C	Q12523	523 aa		4.58	□□□□□ -1.68
VPS72	YDR485C	YOR342C	Q12182	319 aa		4.57	□□□□□ -1.68
VPS72	YDR485C	HTL1	Q9URQ5	78 aa		4.57	□□□□□ -1.68
VPS72	YDR485C	YLR462W	O13556	202 aa		4.57	□□□□□ -1.68
VPS72	YDR485C	SPO13	P23624	291 aa		4.57	□□□□□ -1.68
VPS72	YDR485C	YEL075C	P39972	122 aa		4.57	□□□□□ -1.68
VPS72	YDR485C	YJR015W	P47090	510 aa		4.57	□□□□□ -1.68
VPS72	YDR485C	OSH6	Q02201	448 aa		4.57	□□□□□ -1.68
VPS72	YDR485C	YPD1	Q07688	167 aa		4.57	□□□□□ -1.68
VPS72	YDR485C	YOL029C	Q08187	201 aa		4.57	□□□□□ -1.68
VPS72	YDR485C	YPL162C	Q12042	273 aa		4.57	□□□□□ -1.68
VPS72	YDR485C	PDR18	P53756	1333 aa		4.57	□□□□□ -1.68
VPS72	YDR485C	NHP6A	P11632	93 aa	Known RBP	4.56	□□□□□ -1.68
VPS72	YDR485C	SDT1	P53078	280 aa		4.56	□□□□□ -1.68
VPS72	YDR485C	MDM34	P53083	459 aa		4.56	□□□□□ -1.68
VPS72	YDR485C	PST2	Q12335	198 aa	Known RBP	4.56	□□□□□ -1.68
VPS72	YDR485C	PEX34	P25584	144 aa		4.56	□□□□□ -1.68
VPS72	YDR485C	GLC8	P41818	229 aa		4.56	□□□□□ -1.68
VPS72	YDR485C	HRD1	Q08109	551 aa		4.56	□□□□□ -1.68
VPS72	YDR485C	YOL085C	Q99345	113 aa		4.56	□□□□□ -1.68
VPS72	YDR485C	RPO41	P13433	1351 aa	Known RBP	4.55	□□□□□ -1.68
VPS72	YDR485C	APQ12	P40532	138 aa		4.55	□□□□□ -1.68
VPS72	YDR485C	IGD1	P43598	195 aa		4.55	□□□□□ -1.68
VPS72	YDR485C	RPE1	P46969	238 aa		4.55	□□□□□ -1.68
VPS72	YDR485C	TAF2	P23255	1407 aa		4.55	□□□□□ -1.68
VPS72	YDR485C	CKS1	P20486	150 aa	Known RBP	4.55	□□□□□ -1.68
VPS72	YDR485C	YBL059W	P34224	193 aa		4.55	□□□□□ -1.68
VPS72	YDR485C	YBR285W	P38354	144 aa		4.55	□□□□□ -1.68
VPS72	YDR485C	YEA4	P40004	342 aa		4.55	□□□□□ -1.68
VPS72	YDR485C	YGL118C	P53132	145 aa		4.55	□□□□□ -1.68
VPS72	YDR485C	YML108W	Q03759	105 aa		4.55	□□□□□ -1.68
VPS72	YDR485C	SMT3	Q12306	101 aa	Known RBP	4.55	□□□□□ -1.68
VPS72	YDR485C	YAL067W-A	Q8TGK6	75 aa		4.55	□□□□□ -1.68
VPS72	YDR485C	SPT15	P13393	240 aa	Known RBP	4.54	□□□□□ -1.68
VPS72	YDR485C	RPS1A	P33442	255 aa	Known RBP	4.54	□□□□□ -1.68
VPS72	YDR485C	KRE9	P39005	276 aa		4.54	□□□□□ -1.68
VPS72	YDR485C	UBC7	Q02159	165 aa		4.54	□□□□□ -1.68
VPS72	YDR485C	DAS2	Q12084	232 aa		4.54	□□□□□ -1.68
VPS72	YDR485C	SKI6	P46948	246 aa	Predicted RBP	4.54	□□□□□ -1.68
VPS72	YDR485C	LSM3	P57743	89 aa	Known RBP	4.54	□□□□□ -1.68
VPS72	YDR485C	THI74	Q04083	370 aa		4.54	□□□□□ -1.68
VPS72	YDR485C	YDL180W	Q12301	547 aa		4.54	□□□□□ -1.68
VPS72	YDR485C	YBR298C-A	Q8TGK4	73 aa		4.54	□□□□□ -1.68
VPS72	YDR485C	TOM40	P23644	387 aa	Known RBP	4.53	□□□□□ -1.68
VPS72	YDR485C	SUA7	P29055	345 aa	Predicted RBP	4.53	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 10.9 ms