RNA–Protein interactions for RNA: YDR452W

PPN1, Transcript of Vacuolar endopolyphosphatase with a role in phosphate metabolism, yeast

Gene PPN1, Length 2,025 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PPN1	YDR452W	SNT2	P53127	1403 aa		0.95	□□□□□ -2.26
PPN1	YDR452W	FZF1	P32805	299 aa		0.94	□□□□□ -2.26
PPN1	YDR452W	YNL217W	P40152	326 aa		0.94	□□□□□ -2.26
PPN1	YDR452W	YRB2	P40517	327 aa		0.94	□□□□□ -2.26
PPN1	YDR452W	DOC1	P53068	250 aa		0.94	□□□□□ -2.26
PPN1	YDR452W	RIO1	Q12196	484 aa	Known RBP	0.94	□□□□□ -2.26
PPN1	YDR452W	DOP1	Q03921	1698 aa		0.94	□□□□□ -2.26
PPN1	YDR452W	POL1	P13382	1468 aa		0.94	□□□□□ -2.26
PPN1	YDR452W	YOR1	P53049	1477 aa		0.94	□□□□□ -2.26
PPN1	YDR452W	CHC1	P22137	1653 aa	Known RBP	0.94	□□□□□ -2.26
PPN1	YDR452W	BCY1	P07278	416 aa	Known RBP	0.94	□□□□□ -2.26
PPN1	YDR452W	YPR170W-B	P0C5R9	85 aa		0.94	□□□□□ -2.26
PPN1	YDR452W	LDB7	P38210	180 aa		0.94	□□□□□ -2.26
PPN1	YDR452W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	0.94	□□□□□ -2.26	not detected
PPN1	YDR452W	YML108W	Q03759	105 aa		0.94	□□□□□ -2.26
PPN1	YDR452W	LPP1	Q04396	274 aa		0.94	□□□□□ -2.26
PPN1	YDR452W	HAP1	P0CE41	1502 aa		0.94	□□□□□ -2.26
PPN1	YDR452W	SNF2	P22082	1703 aa		0.94	□□□□□ -2.26
PPN1	YDR452W	SPT3	P06844	337 aa		0.93	□□□□□ -2.26
PPN1	YDR452W	GPA2	P10823	449 aa		0.93	□□□□□ -2.26
PPN1	YDR452W	MRPL25	P23369	157 aa		0.93	□□□□□ -2.26
PPN1	YDR452W	TMA19	P35691	167 aa	Known RBP	0.93	□□□□□ -2.26
PPN1	YDR452W	URA8	P38627	578 aa	Predicted RBP	0.93	□□□□□ -2.26
PPN1	YDR452W	YLR283W	Q05867	314 aa		0.93	□□□□□ -2.26
PPN1	YDR452W	MED4	Q12343	284 aa		0.93	□□□□□ -2.26
PPN1	YDR452W	DNF3	Q12674	1656 aa		0.93	□□□□□ -2.26
PPN1	YDR452W	CAT8	P39113	1433 aa		0.93	□□□□□ -2.26
PPN1	YDR452W	TRM732	Q03496	1420 aa		0.93	□□□□□ -2.26
PPN1	YDR452W	IRA2	P19158	3079 aa		0.93	□□□□□ -2.26
PPN1	YDR452W	UBR2	Q07963	1872 aa		0.93	□□□□□ -2.26
PPN1	YDR452W	TY3B-G	Q99315	1547 aa		0.93	□□□□□ -2.26
PPN1	YDR452W	SRY1	P36007	326 aa		0.93	□□□□□ -2.26
PPN1	YDR452W	CUE1	P38428	203 aa		0.93	□□□□□ -2.26
PPN1	YDR452W	DOG2	P38773	246 aa		0.93	□□□□□ -2.26
PPN1	YDR452W	FMC1	P40491	155 aa		0.93	□□□□□ -2.26
PPN1	YDR452W	YMD8	Q03697	442 aa		0.93	□□□□□ -2.26
PPN1	YDR452W	LSO2	Q3E772	92 aa	Known RBP	0.93	□□□□□ -2.26
PPN1	YDR452W	USO1	P25386	1790 aa		0.92	□□□□□ -2.26
PPN1	YDR452W	VPS15	P22219	1454 aa		0.92	□□□□□ -2.26
PPN1	YDR452W	CDC10	P25342	322 aa	Known RBP	0.92	□□□□□ -2.26
PPN1	YDR452W	GAA1	P39012	614 aa		0.92	□□□□□ -2.26
PPN1	YDR452W	YNR077C	P53758	84 aa		0.92	□□□□□ -2.26
PPN1	YDR452W	SEC16	P48415	2195 aa	Known RBP	0.92	□□□□□ -2.26
PPN1	YDR452W	ULS1	Q08562	1619 aa		0.91	□□□□□ -2.26
PPN1	YDR452W	TCD1	P38756	429 aa		0.91	□□□□□ -2.26
PPN1	YDR452W	RPC17	P47076	161 aa		0.91	□□□□□ -2.26
PPN1	YDR452W	LIA1	P47120	325 aa	Known RBP	0.91	□□□□□ -2.26
PPN1	YDR452W	NSA1	P53136	463 aa	Predicted RBP	0.91	□□□□□ -2.26
PPN1	YDR452W	MPA43	P53583	542 aa	Predicted RBP	0.91	□□□□□ -2.26
PPN1	YDR452W	SMC4	Q12267	1418 aa		0.91	□□□□□ -2.26
PPN1	YDR452W	PDR18	P53756	1333 aa		0.91	□□□□□ -2.26
PPN1	YDR452W	YLR156W	P0CE96	114 aa		0.91	□□□□□ -2.26
PPN1	YDR452W	YLR159W	P0CE97	114 aa		0.91	□□□□□ -2.26
PPN1	YDR452W	YLR161W	P0CE98	114 aa		0.91	□□□□□ -2.26
PPN1	YDR452W	YET1	P35723	206 aa		0.91	□□□□□ -2.26
PPN1	YDR452W	PET117	Q02771	107 aa		0.91	□□□□□ -2.26
PPN1	YDR452W	ANT1	Q06497	328 aa		0.91	□□□□□ -2.26
PPN1	YDR452W	IRA1	P18963	3092 aa		0.9	□□□□□ -2.26
PPN1	YDR452W	SEN1	Q00416	2231 aa	Known RBP	0.9	□□□□□ -2.27
PPN1	YDR452W	GCN2	P15442	1659 aa		0.9	□□□□□ -2.27
PPN1	YDR452W	CPA1	P07258	411 aa	Known RBP	0.9	□□□□□ -2.27
PPN1	YDR452W	QCR8	P08525	94 aa		0.9	□□□□□ -2.27
PPN1	YDR452W	RPL40A	P0CH08	128 aa	Known RBP	0.9	□□□□□ -2.27
PPN1	YDR452W	RPL40B	P0CH09	128 aa	Known RBP	0.9	□□□□□ -2.27
PPN1	YDR452W	MRPS28	P21771	286 aa		0.9	□□□□□ -2.27
PPN1	YDR452W	ATG22	P25568	528 aa		0.9	□□□□□ -2.27
PPN1	YDR452W	UMP1	P38293	148 aa		0.9	□□□□□ -2.27
PPN1	YDR452W	POP4	P38336	279 aa		0.9	□□□□□ -2.27
PPN1	YDR452W	PRM8	P53174	237 aa		0.9	□□□□□ -2.27
PPN1	YDR452W	SWP1	Q02795	286 aa		0.9	□□□□□ -2.27
PPN1	YDR452W	SPT6	P23615	1451 aa	Known RBP	0.9	□□□□□ -2.27
PPN1	YDR452W	MRPL17	P36528	281 aa		0.89	□□□□□ -2.27
PPN1	YDR452W	POP3	P53833	195 aa	Predicted RBP	0.89	□□□□□ -2.27
PPN1	YDR452W	SNZ1	Q03148	297 aa		0.89	□□□□□ -2.27
PPN1	YDR452W	YPL162C	Q12042	273 aa		0.89	□□□□□ -2.27
PPN1	YDR452W	TSC3	Q3E790	80 aa		0.89	□□□□□ -2.27
PPN1	YDR452W	YRF1-1	P0CX20	1796 aa		0.89	□□□□□ -2.27
PPN1	YDR452W	YRF1-5	P0CX21	1796 aa		0.89	□□□□□ -2.27
PPN1	YDR452W	YRF1-8	P0CX22	1796 aa		0.89	□□□□□ -2.27
PPN1	YDR452W	MATALPHA1	P0CY06	175 aa		0.89	□□□□□ -2.27
PPN1	YDR452W	HMLALPHA1	P0CY07	175 aa		0.89	□□□□□ -2.27
PPN1	YDR452W	URA6	P15700	204 aa		0.89	□□□□□ -2.27
PPN1	YDR452W	UBC7	Q02159	165 aa		0.89	□□□□□ -2.27
PPN1	YDR452W	YDR248C	Q03786	193 aa		0.89	□□□□□ -2.27
PPN1	YDR452W	BCK1	Q01389	1478 aa		0.89	□□□□□ -2.27
PPN1	YDR452W	NUP170	P38181	1502 aa		0.88	□□□□□ -2.27
PPN1	YDR452W	VAR1	P02381	398 aa		0.88	□□□□□ -2.27
PPN1	YDR452W	YCR016W	P25617	290 aa	Known RBP	0.88	□□□□□ -2.27
PPN1	YDR452W	MRPL28	P36527	147 aa		0.88	□□□□□ -2.27
PPN1	YDR452W	YER076C	P40049	302 aa		0.88	□□□□□ -2.27
PPN1	YDR452W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	0.88	□□□□□ -2.27	not detected
PPN1	YDR452W	RRN5	Q02983	363 aa		0.88	□□□□□ -2.27
PPN1	YDR452W	FSF1	Q12029	327 aa	Known RBP	0.88	□□□□□ -2.27
PPN1	YDR452W	ATG2	P53855	1592 aa		0.88	□□□□□ -2.27
PPN1	YDR452W	CYR1	P08678	2026 aa	Known RBP	0.88	□□□□□ -2.27
PPN1	YDR452W	SNC2	P33328	115 aa		0.88	□□□□□ -2.27
PPN1	YDR452W	SAY1	P53324	424 aa		0.88	□□□□□ -2.27
PPN1	YDR452W	XRN1	P22147	1528 aa	Known RBP	0.87	□□□□□ -2.27
PPN1	YDR452W	SRB8	P25648	1427 aa		0.87	□□□□□ -2.27
PPN1	YDR452W	ARO1	P08566	1588 aa	Known RBP	0.87	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 86.3 ms