RNA–Protein interactions for RNA: YDR394W

RPT3, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeast

Gene RPT3, Length 1,287 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPT3	YDR394W	MRPL39	P36533	70 aa		5.21	□□□□□ -1.58
RPT3	YDR394W	IKI1	P38874	309 aa		5.21	□□□□□ -1.58
RPT3	YDR394W	POP2	P39008	433 aa		5.21	□□□□□ -1.58
RPT3	YDR394W	YEA6	P39953	335 aa		5.21	□□□□□ -1.58
RPT3	YDR394W	CCS1	P40202	249 aa	Known RBP	5.21	□□□□□ -1.58
RPT3	YDR394W	ATF1	P40353	525 aa		5.21	□□□□□ -1.58
RPT3	YDR394W	POG1	P40473	351 aa		5.21	□□□□□ -1.58
RPT3	YDR394W	PRM5	P40476	318 aa		5.21	□□□□□ -1.58
RPT3	YDR394W	EMC5	P40540	141 aa		5.21	□□□□□ -1.58
RPT3	YDR394W	RPA34	P47006	233 aa	Predicted RBP	5.21	□□□□□ -1.58
RPT3	YDR394W	SSN8	P47821	323 aa		5.21	□□□□□ -1.58
RPT3	YDR394W	HHO1	P53551	258 aa		5.21	□□□□□ -1.58
RPT3	YDR394W	FMP41	P53889	259 aa	Known RBP	5.21	□□□□□ -1.58
RPT3	YDR394W	YDR391C	Q04170	232 aa		5.21	□□□□□ -1.58
RPT3	YDR394W	COQ11	Q05892	277 aa		5.21	□□□□□ -1.58
RPT3	YDR394W	YOL029C	Q08187	201 aa		5.21	□□□□□ -1.58
RPT3	YDR394W	YOR186W	Q08560	144 aa		5.21	□□□□□ -1.58
RPT3	YDR394W	PRS5	Q12265	496 aa	Known RBP	5.21	□□□□□ -1.58
RPT3	YDR394W	CYR1	P08678	2026 aa	Known RBP	5.21	□□□□□ -1.58
RPT3	YDR394W	MSK1	P32048	576 aa		5.2	□□□□□ -1.58
RPT3	YDR394W	ECM31	P38122	312 aa		5.2	□□□□□ -1.58
RPT3	YDR394W	ERV15	P38312	142 aa		5.2	□□□□□ -1.58
RPT3	YDR394W	ARC40	P38328	384 aa	Known RBP	5.2	□□□□□ -1.58
RPT3	YDR394W	SPC25	P40014	221 aa		5.2	□□□□□ -1.58
RPT3	YDR394W	TOK1	P40310	691 aa		5.2	□□□□□ -1.58
RPT3	YDR394W	SLM1	P40485	686 aa		5.2	□□□□□ -1.58
RPT3	YDR394W	QRI1	P43123	477 aa	Known RBP	5.2	□□□□□ -1.58
RPT3	YDR394W	MCM22	P47167	239 aa		5.2	□□□□□ -1.58
RPT3	YDR394W	SOL1	P50278	321 aa		5.2	□□□□□ -1.58
RPT3	YDR394W	ATG4	P53867	494 aa		5.2	□□□□□ -1.58
RPT3	YDR394W	ERV25	P54837	211 aa	Known RBP	5.2	□□□□□ -1.58
RPT3	YDR394W	MEH1	Q02205	184 aa		5.2	□□□□□ -1.58
RPT3	YDR394W	VPS28	Q02767	242 aa		5.2	□□□□□ -1.58
RPT3	YDR394W	MRPS17	Q03246	237 aa	Predicted RBP	5.2	□□□□□ -1.58
RPT3	YDR394W	HRI1	Q05905	244 aa	Known RBP	5.2	□□□□□ -1.58
RPT3	YDR394W	YPD1	Q07688	167 aa		5.2	□□□□□ -1.58
RPT3	YDR394W	YDL180W	Q12301	547 aa		5.2	□□□□□ -1.58
RPT3	YDR394W	PCC1	Q3E833	88 aa		5.2	□□□□□ -1.58
RPT3	YDR394W	Q0144	Q9ZZW2	109 aa		5.2	□□□□□ -1.58
RPT3	YDR394W	STE4	P18851	423 aa		5.19	□□□□□ -1.58
RPT3	YDR394W	FIG1	P38224	298 aa		5.19	□□□□□ -1.58
RPT3	YDR394W	PRS2	P38620	318 aa	Known RBP	5.19	□□□□□ -1.58
RPT3	YDR394W	YEA4	P40004	342 aa		5.19	□□□□□ -1.58
RPT3	YDR394W	MRX5	P47007	382 aa		5.19	□□□□□ -1.58
RPT3	YDR394W	SLX9	P53251	210 aa	Predicted RBP	5.19	□□□□□ -1.58
RPT3	YDR394W	CAF40	P53829	373 aa		5.19	□□□□□ -1.58
RPT3	YDR394W	YIF1	P53845	314 aa	Known RBP	5.19	□□□□□ -1.58
RPT3	YDR394W	RSM10	Q03201	203 aa		5.19	□□□□□ -1.58
RPT3	YDR394W	YPR108W-A	Q3E7B3	70 aa		5.19	□□□□□ -1.58
RPT3	YDR394W	Q0142	Q9ZZW4	58 aa		5.19	□□□□□ -1.58
RPT3	YDR394W	HFA1	P32874	2273 aa		5.18	□□□□□ -1.58
RPT3	YDR394W	RPL25	P04456	142 aa	Known RBP	5.18	□□□□□ -1.58
RPT3	YDR394W	RPL7A	P05737	244 aa	Known RBP	5.18	□□□□□ -1.58
RPT3	YDR394W	YLL053C	P0CD98	152 aa		5.18	□□□□□ -1.58
RPT3	YDR394W	YML003W	P0CF16	290 aa		5.18	□□□□□ -1.58
RPT3	YDR394W	ARO3	P14843	370 aa	Known RBP	5.18	□□□□□ -1.58
RPT3	YDR394W	SAG1	P20840	650 aa		5.18	□□□□□ -1.58
RPT3	YDR394W	LDB16	P25587	256 aa		5.18	□□□□□ -1.58
RPT3	YDR394W	RPB7	P34087	171 aa		5.18	□□□□□ -1.58
RPT3	YDR394W	YUH1	P35127	236 aa		5.18	□□□□□ -1.58
RPT3	YDR394W	MCH2	P36032	473 aa		5.18	□□□□□ -1.58
RPT3	YDR394W	SWD2	P36104	329 aa	Predicted RBP	5.18	□□□□□ -1.58
RPT3	YDR394W	SLM6	P38343	150 aa		5.18	□□□□□ -1.58
RPT3	YDR394W	YBR292C	P38357	123 aa		5.18	□□□□□ -1.58
RPT3	YDR394W	YIL029C	P40538	142 aa		5.18	□□□□□ -1.58
RPT3	YDR394W	CAF16	P43569	289 aa		5.18	□□□□□ -1.58
RPT3	YDR394W	YJR012C	P47087	207 aa		5.18	□□□□□ -1.58
RPT3	YDR394W	MRP51	Q02950	344 aa		5.18	□□□□□ -1.58
RPT3	YDR394W	YMR254C	Q04838	102 aa		5.18	□□□□□ -1.58
RPT3	YDR394W	PIN3	Q06449	215 aa		5.18	□□□□□ -1.58
RPT3	YDR394W	ZEO1	Q08245	113 aa		5.18	□□□□□ -1.58
RPT3	YDR394W	RPL7B	Q12213	244 aa	Known RBP	5.18	□□□□□ -1.58
RPT3	YDR394W	COX19	Q3E731	98 aa		5.18	□□□□□ -1.58
RPT3	YDR394W	MET3	P08536	511 aa		5.17	□□□□□ -1.58
RPT3	YDR394W	SEC62	P21825	274 aa		5.17	□□□□□ -1.58
RPT3	YDR394W	ERG2	P32352	222 aa		5.17	□□□□□ -1.58
RPT3	YDR394W	MNS1	P32906	549 aa		5.17	□□□□□ -1.58
RPT3	YDR394W	PRS3	P38689	320 aa	Known RBP	5.17	□□□□□ -1.58
RPT3	YDR394W	PAC2	P39937	518 aa		5.17	□□□□□ -1.58
RPT3	YDR394W	YER079W	P40052	210 aa	Known RBP	5.17	□□□□□ -1.58
RPT3	YDR394W	PGD1	P40356	397 aa		5.17	□□□□□ -1.58
RPT3	YDR394W	YIL169C	P40442	995 aa		5.17	□□□□□ -1.58
RPT3	YDR394W	SEC24	P40482	926 aa	Known RBP	5.17	□□□□□ -1.58
RPT3	YDR394W	IKS1	P47042	667 aa		5.17	□□□□□ -1.58
RPT3	YDR394W	YNR066C	P53752	436 aa		5.17	□□□□□ -1.58
RPT3	YDR394W	YDR415C	Q04033	374 aa	Predicted RBP	5.17	□□□□□ -1.58
RPT3	YDR394W	FIT1	Q04433	528 aa		5.17	□□□□□ -1.58
RPT3	YDR394W	ASM4	Q05166	528 aa		5.17	□□□□□ -1.58
RPT3	YDR394W	YPR098C	Q06089	161 aa		5.17	□□□□□ -1.58
RPT3	YDR394W	YDR157W	A0A023PZE8	133 aa		5.16	□□□□□ -1.58
RPT3	YDR394W	IPP1	P00817	287 aa	Known RBP	5.16	□□□□□ -1.58
RPT3	YDR394W	SIP1	P32578	815 aa		5.16	□□□□□ -1.58
RPT3	YDR394W	NTC20	P38302	140 aa	Predicted RBP	5.16	□□□□□ -1.58
RPT3	YDR394W	OST1	P41543	476 aa	Known RBP	5.16	□□□□□ -1.58
RPT3	YDR394W	YJR056C	P47115	236 aa		5.16	□□□□□ -1.58
RPT3	YDR394W	ERG25	P53045	309 aa		5.16	□□□□□ -1.58
RPT3	YDR394W	TMA23	Q03525	211 aa		5.16	□□□□□ -1.58
RPT3	YDR394W	RCE1	Q03530	315 aa		5.16	□□□□□ -1.58
RPT3	YDR394W	YMR082C	Q04276	118 aa		5.16	□□□□□ -1.58
RPT3	YDR394W	YMR090W	Q04304	227 aa	Known RBP	5.16	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 89.6 ms