RNA–Protein interactions for RNA: YDR022C

ATG31, Transcript of Autophagy-specific protein required for autophagosome formation, yeast

Gene ATG31, Length 591 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG31	YDR022C	LSO2	Q3E772	92 aa	Known RBP	0.37	□□□□□ -2.35
ATG31	YDR022C	TSC3	Q3E790	80 aa		0.37	□□□□□ -2.35
ATG31	YDR022C	AQY2	P0CD90	149 aa		0.36	□□□□□ -2.35
ATG31	YDR022C	MRPL25	P23369	157 aa		0.36	□□□□□ -2.35
ATG31	YDR022C	PBN1	P25580	416 aa		0.36	□□□□□ -2.35
ATG31	YDR022C	RIB7	P33312	244 aa		0.36	□□□□□ -2.35
ATG31	YDR022C	MRPL17	P36528	281 aa		0.36	□□□□□ -2.35
ATG31	YDR022C	PRE6	P40303	254 aa	Known RBP	0.36	□□□□□ -2.35
ATG31	YDR022C	MCM22	P47167	239 aa		0.36	□□□□□ -2.35
ATG31	YDR022C	CUS2	P53830	285 aa	Predicted RBP	0.36	□□□□□ -2.35
ATG31	YDR022C	POP3	P53833	195 aa	Predicted RBP	0.36	□□□□□ -2.35
ATG31	YDR022C	SWP1	Q02795	286 aa		0.36	□□□□□ -2.35
ATG31	YDR022C	AIM36	Q03798	255 aa		0.36	□□□□□ -2.35
ATG31	YDR022C	KRE28	Q04431	385 aa		0.36	□□□□□ -2.35
ATG31	YDR022C	TIM9	O74700	87 aa		0.35	□□□□□ -2.35
ATG31	YDR022C	SIR2	P06700	562 aa		0.35	□□□□□ -2.35
ATG31	YDR022C	CDC10	P25342	322 aa	Known RBP	0.35	□□□□□ -2.35
ATG31	YDR022C	YJR149W	P47177	404 aa		0.35	□□□□□ -2.35
ATG31	YDR022C	YNL134C	P53912	376 aa	Known RBP	0.35	□□□□□ -2.35
ATG31	YDR022C	RCE1	Q03530	315 aa		0.35	□□□□□ -2.35
ATG31	YDR022C	TDA8	Q6B2U8	126 aa		0.35	□□□□□ -2.35
ATG31	YDR022C	YHR212W-A	P0CX91	67 aa		0.34	□□□□□ -2.36
ATG31	YDR022C	YUH1	P35127	236 aa		0.34	□□□□□ -2.36
ATG31	YDR022C	SIP3	P38717	1229 aa		0.34	□□□□□ -2.36
ATG31	YDR022C	GVP36	P40531	326 aa	Known RBP	0.34	□□□□□ -2.36
ATG31	YDR022C	ARO8	P53090	500 aa	Known RBP	0.34	□□□□□ -2.36
ATG31	YDR022C	DID2	P69771	204 aa		0.34	□□□□□ -2.36
ATG31	YDR022C	YHR007C-A	Q07074	71 aa		0.34	□□□□□ -2.36
ATG31	YDR022C	GPM2	Q12008	311 aa		0.34	□□□□□ -2.36
ATG31	YDR022C	RAD28	Q12021	506 aa		0.34	□□□□□ -2.36
ATG31	YDR022C	FSF1	Q12029	327 aa	Known RBP	0.34	□□□□□ -2.36
ATG31	YDR022C	ATG31	Q12421	196 aa		0.34	□□□□□ -2.36
ATG31	YDR022C	ATG40	Q99325	256 aa		0.34	□□□□□ -2.36
ATG31	YDR022C	YLR236C	A0A023PZG4	107 aa		0.33	□□□□□ -2.36
ATG31	YDR022C	BCY1	P07278	416 aa	Known RBP	0.33	□□□□□ -2.36
ATG31	YDR022C	LDB7	P38210	180 aa		0.33	□□□□□ -2.36
ATG31	YDR022C	OPY1	P38271	328 aa		0.33	□□□□□ -2.36
ATG31	YDR022C	EDC3	P39998	551 aa	Known RBP	0.33	□□□□□ -2.36
ATG31	YDR022C	PRM8	P53174	237 aa		0.33	□□□□□ -2.36
ATG31	YDR022C	YLR173W	Q06247	608 aa		0.33	□□□□□ -2.36
ATG31	YDR022C	RRT8	Q08219	342 aa		0.33	□□□□□ -2.36
ATG31	YDR022C	URA6	P15700	204 aa		0.32	□□□□□ -2.36
ATG31	YDR022C	RPT5	P33297	434 aa	Known RBP	0.32	□□□□□ -2.36
ATG31	YDR022C	NTF2	P33331	125 aa	Known RBP	0.32	□□□□□ -2.36
ATG31	YDR022C	NUP84	P52891	726 aa		0.32	□□□□□ -2.36
ATG31	YDR022C	FYV6	P53913	173 aa		0.32	□□□□□ -2.36
ATG31	YDR022C	CUE4	Q04201	117 aa	Predicted RBP	0.32	□□□□□ -2.36
ATG31	YDR022C	MED4	Q12343	284 aa		0.32	□□□□□ -2.36
ATG31	YDR022C	CDC28	P00546	298 aa	Known RBP	0.31	□□□□□ -2.36
ATG31	YDR022C	SEC11	P15367	167 aa		0.31	□□□□□ -2.36
ATG31	YDR022C	DBF2	P22204	572 aa		0.31	□□□□□ -2.36
ATG31	YDR022C	YBR285W	P38354	144 aa		0.31	□□□□□ -2.36
ATG31	YDR022C	AST2	P39945	430 aa	Known RBP	0.31	□□□□□ -2.36
ATG31	YDR022C	FLX1	P40464	311 aa		0.31	□□□□□ -2.36
ATG31	YDR022C	YAE1	P47118	141 aa	Predicted RBP	0.31	□□□□□ -2.36
ATG31	YDR022C	YDR274C	P87283	123 aa		0.31	□□□□□ -2.36
ATG31	YDR022C	MCP1	Q12106	302 aa		0.31	□□□□□ -2.36
ATG31	YDR022C	SPT3	P06844	337 aa		0.3	□□□□□ -2.36
ATG31	YDR022C	STP22	P25604	385 aa		0.3	□□□□□ -2.36
ATG31	YDR022C	SHE2	P36068	246 aa	Known RBP RIP-Chip data	0.3	□□□□□ -2.36	not detected
ATG31	YDR022C	TVP23	P38962	199 aa		0.3	□□□□□ -2.36
ATG31	YDR022C	RMD6	P39975	231 aa		0.3	□□□□□ -2.36
ATG31	YDR022C	FMC1	P40491	155 aa		0.3	□□□□□ -2.36
ATG31	YDR022C	YFL065C	P43539	102 aa		0.3	□□□□□ -2.36
ATG31	YDR022C	LIA1	P47120	325 aa	Known RBP	0.3	□□□□□ -2.36
ATG31	YDR022C	BXI1	P48558	297 aa		0.3	□□□□□ -2.36
ATG31	YDR022C	CWC27	Q02770	301 aa		0.3	□□□□□ -2.36
ATG31	YDR022C	CDC123	Q05791	360 aa		0.3	□□□□□ -2.36
ATG31	YDR022C	RRP36	Q12481	300 aa	Predicted RBP	0.3	□□□□□ -2.36
ATG31	YDR022C	URA5	P13298	226 aa	Known RBP	0.29	□□□□□ -2.36
ATG31	YDR022C	BET1	P22804	142 aa		0.29	□□□□□ -2.36
ATG31	YDR022C	YCR016W	P25617	290 aa	Known RBP	0.29	□□□□□ -2.36
ATG31	YDR022C	SEC17	P32602	292 aa		0.29	□□□□□ -2.36
ATG31	YDR022C	PTM1	P32857	523 aa		0.29	□□□□□ -2.36
ATG31	YDR022C	SSO1	P32867	290 aa		0.29	□□□□□ -2.36
ATG31	YDR022C	APS1	P35181	156 aa		0.29	□□□□□ -2.36
ATG31	YDR022C	UTP30	P36144	274 aa	Known RBP	0.29	□□□□□ -2.36
ATG31	YDR022C	YHL042W	P38729	150 aa		0.29	□□□□□ -2.36
ATG31	YDR022C	COX15	P40086	486 aa		0.29	□□□□□ -2.36
ATG31	YDR022C	HYR1	P40581	163 aa	Known RBP	0.29	□□□□□ -2.36
ATG31	YDR022C	FAR7	P43592	221 aa		0.29	□□□□□ -2.36
ATG31	YDR022C	ALG13	P53178	202 aa		0.29	□□□□□ -2.36
ATG31	YDR022C	YPR174C	Q06616	221 aa	Predicted RBP	0.29	□□□□□ -2.36
ATG31	YDR022C	CFT1	Q06632	1357 aa	Known RBP	0.29	□□□□□ -2.36
ATG31	YDR022C	FAS1	P07149	2051 aa	Known RBP	0.28	□□□□□ -2.36
ATG31	YDR022C	MATALPHA1	P0CY06	175 aa		0.28	□□□□□ -2.36
ATG31	YDR022C	HMLALPHA1	P0CY07	175 aa		0.28	□□□□□ -2.36
ATG31	YDR022C	KSS1	P14681	368 aa		0.28	□□□□□ -2.36
ATG31	YDR022C	RPO26	P20435	155 aa		0.28	□□□□□ -2.36
ATG31	YDR022C	MSN4	P33749	630 aa		0.28	□□□□□ -2.36
ATG31	YDR022C	VMA22	P38784	181 aa		0.28	□□□□□ -2.36
ATG31	YDR022C	YPL073C	P40323	161 aa		0.28	□□□□□ -2.36
ATG31	YDR022C	BRR6	P53062	197 aa		0.28	□□□□□ -2.36
ATG31	YDR022C	YNL247W	P53852	767 aa	Known RBP	0.28	□□□□□ -2.36
ATG31	YDR022C	PET117	Q02771	107 aa		0.28	□□□□□ -2.36
ATG31	YDR022C	SRL4	Q03085	281 aa		0.28	□□□□□ -2.36
ATG31	YDR022C	MDM35	O60200	86 aa		0.27	□□□□□ -2.37
ATG31	YDR022C	RPL28	P02406	149 aa	Known RBP	0.27	□□□□□ -2.37
ATG31	YDR022C	CDC36	P06100	191 aa	Predicted RBP	0.27	□□□□□ -2.37
ATG31	YDR022C	YCL042W	P25572	119 aa		0.27	□□□□□ -2.37

Retrieved 100 of 5,963 RNA–protein pairs in 34 ms