RNA–Protein interactions for RNA: YDL113C

ATG20, Transcript of Sorting nexin family member, yeastyeast

Gene ATG20, Length 1,923 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG20YDL113C HHT1P61830 136 aa4.48□□□□□ -1.69
ATG20YDL113C SKO1Q02100 647 aa4.48□□□□□ -1.69
ATG20YDL113C NOC4Q06512 552 aaPredicted RBP4.48□□□□□ -1.69
ATG20YDL113C YOR186WQ08560 144 aa4.48□□□□□ -1.69
ATG20YDL113C AEP3Q12089 606 aa4.48□□□□□ -1.69
ATG20YDL113C YLR146W-AQ2V2P1 62 aa4.48□□□□□ -1.69
ATG20YDL113C RPL25P04456 142 aaKnown RBP4.48□□□□□ -1.69
ATG20YDL113C RPL40AP0CH08 128 aaKnown RBP4.48□□□□□ -1.69
ATG20YDL113C RPL40BP0CH09 128 aaKnown RBP4.48□□□□□ -1.69
ATG20YDL113C FUS3P16892 353 aaKnown RBP4.48□□□□□ -1.69
ATG20YDL113C GLC7P32598 312 aaKnown RBP4.48□□□□□ -1.69
ATG20YDL113C EMP24P32803 203 aaKnown RBP4.48□□□□□ -1.69
ATG20YDL113C MRPL39P36533 70 aa4.48□□□□□ -1.69
ATG20YDL113C NAT2P37293 288 aa4.48□□□□□ -1.69
ATG20YDL113C MOH1P38191 138 aa4.48□□□□□ -1.69
ATG20YDL113C LSM12P38828 187 aaKnown RBP4.48□□□□□ -1.69
ATG20YDL113C YER084WP40057 128 aa4.48□□□□□ -1.69
ATG20YDL113C SLX9P53251 210 aaPredicted RBP4.48□□□□□ -1.69
ATG20YDL113C RCE1Q03530 315 aa4.48□□□□□ -1.69
ATG20YDL113C DPB4Q04603 196 aaKnown RBP4.48□□□□□ -1.69
ATG20YDL113C RAF1Q06891 181 aa4.48□□□□□ -1.69
ATG20YDL113C MSL5Q12186 476 aaKnown RBP RIP-Chip data4.48□□□□□ -1.69not detected
ATG20YDL113C USB1Q12208 290 aaKnown RBP4.48□□□□□ -1.69
ATG20YDL113C VAM3Q12241 283 aa4.48□□□□□ -1.69
ATG20YDL113C ATG15P25641 520 aa4.47□□□□□ -1.69
ATG20YDL113C OCH1P31755 480 aa4.47□□□□□ -1.69
ATG20YDL113C MNS1P32906 549 aa4.47□□□□□ -1.69
ATG20YDL113C SWD2P36104 329 aaPredicted RBP4.47□□□□□ -1.69
ATG20YDL113C GCV3P39726 170 aaPredicted RBP4.47□□□□□ -1.69
ATG20YDL113C RFC2P40348 353 aa4.47□□□□□ -1.69
ATG20YDL113C OST1P41543 476 aaKnown RBP4.47□□□□□ -1.69
ATG20YDL113C GWT1P47026 490 aa4.47□□□□□ -1.69
ATG20YDL113C SSN8P47821 323 aa4.47□□□□□ -1.69
ATG20YDL113C UBC12P52491 188 aa4.47□□□□□ -1.69
ATG20YDL113C PNC1P53184 216 aaKnown RBP4.47□□□□□ -1.69
ATG20YDL113C SMX3P54999 86 aaPredicted RBP4.47□□□□□ -1.69
ATG20YDL113C VPS28Q02767 242 aa4.47□□□□□ -1.69
ATG20YDL113C THI74Q04083 370 aa4.47□□□□□ -1.69
ATG20YDL113C HRI1Q05905 244 aaKnown RBP4.47□□□□□ -1.69
ATG20YDL113C FIT3Q08907 204 aa4.47□□□□□ -1.69
ATG20YDL113C YLR108CQ12259 485 aa4.47□□□□□ -1.69
ATG20YDL113C MED4Q12343 284 aa4.47□□□□□ -1.69
ATG20YDL113C FOL3Q12676 427 aaPredicted RBP4.47□□□□□ -1.69
ATG20YDL113C YOR192C-CQ3E736 78 aa4.47□□□□□ -1.69
ATG20YDL113C TRA1P38811 3744 aa4.47□□□□□ -1.69
ATG20YDL113C IPP1P00817 287 aaKnown RBP4.46□□□□□ -1.69
ATG20YDL113C DFR1P07807 211 aaKnown RBP RIP-Chip data4.46□□□□□ -1.69not detected
ATG20YDL113C SAG1P20840 650 aa4.46□□□□□ -1.69
ATG20YDL113C MIR1P23641 311 aaKnown RBP4.46□□□□□ -1.69
ATG20YDL113C IFM1P25038 676 aa4.46□□□□□ -1.69
ATG20YDL113C FLO10P36170 1169 aa4.46□□□□□ -1.69
ATG20YDL113C SWD3P38123 315 aa4.46□□□□□ -1.69
ATG20YDL113C ARC40P38328 384 aaKnown RBP4.46□□□□□ -1.69
ATG20YDL113C AGX1P43567 385 aa4.46□□□□□ -1.69
ATG20YDL113C YGL260WP53056 76 aa4.46□□□□□ -1.69
ATG20YDL113C PKP2P53170 491 aa4.46□□□□□ -1.69
ATG20YDL113C EOS1P53938 366 aa4.46□□□□□ -1.69
ATG20YDL113C HOF1Q05080 669 aa4.46□□□□□ -1.69
ATG20YDL113C BER1Q06688 274 aaKnown RBP4.46□□□□□ -1.69
ATG20YDL113C YOL118CQ08259 102 aa4.46□□□□□ -1.69
ATG20YDL113C QCR2P07257 368 aa4.46□□□□□ -1.7
ATG20YDL113C SSA3P09435 649 aaKnown RBP4.46□□□□□ -1.7
ATG20YDL113C RPL35AP0CX84 120 aaKnown RBP4.46□□□□□ -1.7
ATG20YDL113C RPL35BP0CX85 120 aaKnown RBP4.46□□□□□ -1.7
ATG20YDL113C SEC62P21825 274 aa4.46□□□□□ -1.7
ATG20YDL113C ADH5P38113 351 aaKnown RBP4.46□□□□□ -1.7
ATG20YDL113C ASP1P38986 381 aaPredicted RBP4.46□□□□□ -1.7
ATG20YDL113C GLR1P41921 483 aaKnown RBP4.46□□□□□ -1.7
ATG20YDL113C SNN1P48232 102 aa4.46□□□□□ -1.7
ATG20YDL113C PHO23P50947 330 aa4.46□□□□□ -1.7
ATG20YDL113C EST3Q03096 181 aa4.46□□□□□ -1.7
ATG20YDL113C RSM10Q03201 203 aa4.46□□□□□ -1.7
ATG20YDL113C FCF2Q12035 217 aaPredicted RBP4.46□□□□□ -1.7
ATG20YDL113C TGS1Q12052 315 aa4.46□□□□□ -1.7
ATG20YDL113C PRS5Q12265 496 aaKnown RBP4.46□□□□□ -1.7
ATG20YDL113C ERG27Q12452 347 aaKnown RBP4.46□□□□□ -1.7
ATG20YDL113C YML003WP0CF16 290 aa4.45□□□□□ -1.7
ATG20YDL113C PEX4P29340 183 aa4.45□□□□□ -1.7
ATG20YDL113C RPB7P34087 171 aa4.45□□□□□ -1.7
ATG20YDL113C YBR096WP38256 230 aa4.45□□□□□ -1.7
ATG20YDL113C PAC2P39937 518 aa4.45□□□□□ -1.7
ATG20YDL113C SEC24P40482 926 aaKnown RBP4.45□□□□□ -1.7
ATG20YDL113C ACT1P60010 375 aaKnown RBP4.45□□□□□ -1.7
ATG20YDL113C YDR114CQ04597 100 aa4.45□□□□□ -1.7
ATG20YDL113C RFU1Q08003 200 aa4.45□□□□□ -1.7
ATG20YDL113C YCT1Q12235 531 aa4.45□□□□□ -1.7
ATG20YDL113C MPD1Q12404 318 aaKnown RBP4.45□□□□□ -1.7
ATG20YDL113C HUG1Q6Q5K6 68 aa4.45□□□□□ -1.7
ATG20YDL113C RPL7AP05737 244 aaKnown RBP4.44□□□□□ -1.7
ATG20YDL113C IMP1P28627 190 aa4.44□□□□□ -1.7
ATG20YDL113C YPC1P38298 316 aa4.44□□□□□ -1.7
ATG20YDL113C YIL077CP40508 320 aa4.44□□□□□ -1.7
ATG20YDL113C MCM22P47167 239 aa4.44□□□□□ -1.7
ATG20YDL113C BUL1P48524 976 aa4.44□□□□□ -1.7
ATG20YDL113C CWC25P53854 179 aaKnown RBP4.44□□□□□ -1.7
ATG20YDL113C PML1Q07930 204 aaPredicted RBP4.44□□□□□ -1.7
ATG20YDL113C SWT1Q12104 458 aa4.44□□□□□ -1.7
ATG20YDL113C FRE8Q12209 686 aa4.44□□□□□ -1.7
ATG20YDL113C RPL7BQ12213 244 aaKnown RBP4.44□□□□□ -1.7
ATG20YDL113C GCN1P33892 2672 aaKnown RBP4.44□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms