RNA–Protein interactions for RNA: YDL042C

SIR2, Transcript of Conserved NAD+ dependent histone deacetylase of the Sirtuin family, yeast

Gene SIR2, Length 1,689 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIR2	YDL042C	HOC1	P47124	396 aa		3.78	□□□□□ -1.81
SIR2	YDL042C	MRH4	P53166	561 aa		3.78	□□□□□ -1.81
SIR2	YDL042C	YGL034C	P53186	121 aa		3.78	□□□□□ -1.81
SIR2	YDL042C	SPG4	Q04438	115 aa		3.78	□□□□□ -1.81
SIR2	YDL042C	YDR124W	Q04608	324 aa		3.78	□□□□□ -1.81
SIR2	YDL042C	GEP5	Q12393	293 aa		3.78	□□□□□ -1.81
SIR2	YDL042C	SEY1	Q99287	776 aa		3.78	□□□□□ -1.81
SIR2	YDL042C	RPL40A	P0CH08	128 aa	Known RBP	3.77	□□□□□ -1.81
SIR2	YDL042C	RPL40B	P0CH09	128 aa	Known RBP	3.77	□□□□□ -1.81
SIR2	YDL042C	SRX1	P36077	127 aa		3.77	□□□□□ -1.81
SIR2	YDL042C	LDB7	P38210	180 aa		3.77	□□□□□ -1.81
SIR2	YDL042C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	3.77	□□□□□ -1.81	not detected
SIR2	YDL042C	THO1	P40040	218 aa	Known RBP	3.77	□□□□□ -1.81
SIR2	YDL042C	YER188W	P40103	239 aa		3.77	□□□□□ -1.81
SIR2	YDL042C	YJR141W	P47172	347 aa	Predicted RBP	3.77	□□□□□ -1.81
SIR2	YDL042C	TIM13	P53299	105 aa		3.77	□□□□□ -1.81
SIR2	YDL042C	DIA1	P54005	336 aa		3.77	□□□□□ -1.81
SIR2	YDL042C	RPL22B	P56628	122 aa	Known RBP	3.77	□□□□□ -1.81
SIR2	YDL042C	YPR114W	Q06107	315 aa		3.77	□□□□□ -1.81
SIR2	YDL042C	YPR172W	Q06608	200 aa		3.77	□□□□□ -1.81
SIR2	YDL042C	CSF1	Q12150	2958 aa		3.76	□□□□□ -1.81
SIR2	YDL042C	MRPL39	P36533	70 aa		3.76	□□□□□ -1.81
SIR2	YDL042C	RPC17	P47076	161 aa		3.76	□□□□□ -1.81
SIR2	YDL042C	RHO3	Q00245	231 aa	Known RBP	3.76	□□□□□ -1.81
SIR2	YDL042C	GOT1	Q03554	138 aa		3.76	□□□□□ -1.81
SIR2	YDL042C	LDB18	Q07887	179 aa		3.76	□□□□□ -1.81
SIR2	YDL042C	RRP40	Q08285	240 aa	Known RBP	3.76	□□□□□ -1.81
SIR2	YDL042C	UBR1	P19812	1950 aa		3.76	□□□□□ -1.81
SIR2	YDL042C	CBF1	P17106	351 aa		3.75	□□□□□ -1.81
SIR2	YDL042C	MSN4	P33749	630 aa		3.75	□□□□□ -1.81
SIR2	YDL042C	YHB1	P39676	399 aa	Known RBP	3.75	□□□□□ -1.81
SIR2	YDL042C	SSU72	P53538	206 aa	Predicted RBP	3.75	□□□□□ -1.81
SIR2	YDL042C	YLR283W	Q05867	314 aa		3.75	□□□□□ -1.81
SIR2	YDL042C	SYC1	Q08553	188 aa	Predicted RBP	3.75	□□□□□ -1.81
SIR2	YDL042C	YOR268C	Q08734	132 aa		3.75	□□□□□ -1.81
SIR2	YDL042C	POP4	P38336	279 aa		3.74	□□□□□ -1.81
SIR2	YDL042C	TIF34	P40217	347 aa	Known RBP	3.74	□□□□□ -1.81
SIR2	YDL042C	GON7	P46984	123 aa		3.74	□□□□□ -1.81
SIR2	YDL042C	NUM1	Q00402	2748 aa		3.74	□□□□□ -1.81
SIR2	YDL042C	MGT1	P26188	188 aa		3.73	□□□□□ -1.81
SIR2	YDL042C	YER085C	P40058	173 aa		3.73	□□□□□ -1.81
SIR2	YDL042C	ATG10	Q07879	167 aa		3.73	□□□□□ -1.81
SIR2	YDL042C	RIO1	Q12196	484 aa	Known RBP	3.73	□□□□□ -1.81
SIR2	YDL042C	IRA1	P18963	3092 aa		3.73	□□□□□ -1.81
SIR2	YDL042C	ACC1	Q00955	2233 aa	Known RBP	3.73	□□□□□ -1.81
SIR2	YDL042C	SEC22	P22214	214 aa		3.72	□□□□□ -1.81
SIR2	YDL042C	GRH1	Q04410	372 aa	Known RBP	3.72	□□□□□ -1.81
SIR2	YDL042C	YLR179C	Q06252	201 aa	Known RBP	3.72	□□□□□ -1.81
SIR2	YDL042C	YOR186W	Q08560	144 aa		3.72	□□□□□ -1.81
SIR2	YDL042C	VPS68	Q12016	184 aa		3.72	□□□□□ -1.81
SIR2	YDL042C	MATALPHA1	P0CY06	175 aa		3.71	□□□□□ -1.81
SIR2	YDL042C	HMLALPHA1	P0CY07	175 aa		3.71	□□□□□ -1.81
SIR2	YDL042C	YHR127W	P38833	243 aa	Known RBP	3.71	□□□□□ -1.81
SIR2	YDL042C	POL2	P21951	2222 aa	Known RBP	3.71	□□□□□ -1.82
SIR2	YDL042C	DPM1	P14020	267 aa	Known RBP	3.71	□□□□□ -1.82
SIR2	YDL042C	UBC6	P33296	250 aa	Predicted RBP	3.71	□□□□□ -1.82
SIR2	YDL042C	MIX17	Q03667	156 aa		3.71	□□□□□ -1.82
SIR2	YDL042C	CMD1	P06787	147 aa	Known RBP	3.7	□□□□□ -1.82
SIR2	YDL042C	RPO26	P20435	155 aa		3.7	□□□□□ -1.82
SIR2	YDL042C	MRPL25	P23369	157 aa		3.7	□□□□□ -1.82
SIR2	YDL042C	UTR5	P32630	166 aa		3.7	□□□□□ -1.82
SIR2	YDL042C	YGP1	P38616	354 aa	Known RBP	3.7	□□□□□ -1.82
SIR2	YDL042C	CYC2	P38909	366 aa		3.7	□□□□□ -1.82
SIR2	YDL042C	CIS3	P47001	227 aa		3.7	□□□□□ -1.82
SIR2	YDL042C	CDC123	Q05791	360 aa		3.7	□□□□□ -1.82
SIR2	YDL042C	SCL1	P21243	252 aa	Known RBP	3.69	□□□□□ -1.82
SIR2	YDL042C	YCR099C	P25657	155 aa		3.69	□□□□□ -1.82
SIR2	YDL042C	YKL075C	P36083	450 aa		3.69	□□□□□ -1.82
SIR2	YDL042C	YML096W	Q04489	525 aa		3.69	□□□□□ -1.82
SIR2	YDL042C	CDC8	P00572	216 aa		3.68	□□□□□ -1.82
SIR2	YDL042C	GPA2	P10823	449 aa		3.68	□□□□□ -1.82
SIR2	YDL042C	RPS5	P26783	225 aa	Known RBP	3.68	□□□□□ -1.82
SIR2	YDL042C	YEL073C	P39974	107 aa		3.68	□□□□□ -1.82
SIR2	YDL042C	SMX2	P40204	77 aa	Known RBP	3.68	□□□□□ -1.82
SIR2	YDL042C	SEI1	Q06058	285 aa		3.68	□□□□□ -1.82
SIR2	YDL042C	GTT2	Q12390	233 aa		3.68	□□□□□ -1.82
SIR2	YDL042C	CPA1	P07258	411 aa	Known RBP	3.68	□□□□□ -1.82
SIR2	YDL042C	SGA1	P08019	549 aa		3.68	□□□□□ -1.82
SIR2	YDL042C	YCR102C	P25608	368 aa		3.68	□□□□□ -1.82
SIR2	YDL042C	PRP18	P33411	251 aa	Predicted RBP	3.68	□□□□□ -1.82
SIR2	YDL042C	TRM12	Q04235	462 aa		3.68	□□□□□ -1.82
SIR2	YDL042C	RDS3	Q06835	107 aa	Predicted RBP	3.68	□□□□□ -1.82
SIR2	YDL042C	YLR126C	Q12288	251 aa		3.68	□□□□□ -1.82
SIR2	YDL042C	YMR030W-A	Q3E760	96 aa		3.68	□□□□□ -1.82
SIR2	YDL042C	HFA1	P32874	2273 aa		3.67	□□□□□ -1.82
SIR2	YDL042C	NSP1	P14907	823 aa	Known RBP	3.67	□□□□□ -1.82
SIR2	YDL042C	MER1	P16523	270 aa		3.67	□□□□□ -1.82
SIR2	YDL042C	RCN1	P36054	211 aa		3.67	□□□□□ -1.82
SIR2	YDL042C	ETR1	P38071	380 aa		3.67	□□□□□ -1.82
SIR2	YDL042C	CUE1	P38428	203 aa		3.67	□□□□□ -1.82
SIR2	YDL042C	COG3	P40094	801 aa		3.67	□□□□□ -1.82
SIR2	YDL042C	YNL046W	P53956	172 aa		3.67	□□□□□ -1.82
SIR2	YDL042C	SPO77	Q06134	477 aa		3.67	□□□□□ -1.82
SIR2	YDL042C	YET3	Q07451	203 aa		3.67	□□□□□ -1.82
SIR2	YDL042C	RPL26A	P05743	127 aa	Known RBP	3.66	□□□□□ -1.82
SIR2	YDL042C	GCY1	P14065	312 aa	Known RBP RIP-Chip data	3.66	□□□□□ -1.82	not detected
SIR2	YDL042C	SEC14	P24280	304 aa	Known RBP	3.66	□□□□□ -1.82
SIR2	YDL042C	YPT52	P36018	234 aa	Known RBP	3.66	□□□□□ -1.82
SIR2	YDL042C	MAK5	P38112	773 aa	Predicted RBP	3.66	□□□□□ -1.82
SIR2	YDL042C	YJL016W	P47072	561 aa		3.66	□□□□□ -1.82

Retrieved 100 of 5,963 RNA–protein pairs in 7.9 ms