RNA–Protein interactions for RNA: YBR082C

UBC4, Transcript of Ubiquitin-conjugating enzyme (E2), yeast

Gene UBC4, Length 447 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC4	YBR082C	SWT1	Q12104	458 aa		4.58	□□□□□ -1.68
UBC4	YBR082C	WTM2	Q12206	467 aa		4.58	□□□□□ -1.68
UBC4	YBR082C	RPL13A	Q12690	199 aa	Predicted RBP	4.58	□□□□□ -1.68
UBC4	YBR082C	RPL39	P04650	51 aa		4.57	□□□□□ -1.68
UBC4	YBR082C	RPP1A	P05318	106 aa	Predicted RBP	4.57	□□□□□ -1.68
UBC4	YBR082C	SSA3	P09435	649 aa	Known RBP	4.57	□□□□□ -1.68
UBC4	YBR082C	SPS100	P13130	326 aa		4.57	□□□□□ -1.68
UBC4	YBR082C	VMA3	P25515	160 aa		4.57	□□□□□ -1.68
UBC4	YBR082C	SPC29	P33419	253 aa		4.57	□□□□□ -1.68
UBC4	YBR082C	YOX1	P34161	385 aa		4.57	□□□□□ -1.68
UBC4	YBR082C	ERV15	P38312	142 aa		4.57	□□□□□ -1.68
UBC4	YBR082C	SSO2	P39926	295 aa		4.57	□□□□□ -1.68
UBC4	YBR082C	YHC3	P47040	408 aa		4.57	□□□□□ -1.68
UBC4	YBR082C	SRB7	P47822	140 aa		4.57	□□□□□ -1.68
UBC4	YBR082C	GPI15	P53961	229 aa		4.57	□□□□□ -1.68
UBC4	YBR082C	HSK3	P69852	69 aa		4.57	□□□□□ -1.68
UBC4	YBR082C	CAC2	Q04199	468 aa		4.57	□□□□□ -1.68
UBC4	YBR082C	RIM9	Q04734	239 aa		4.57	□□□□□ -1.68
UBC4	YBR082C	PRP11	Q07350	266 aa	Predicted RBP	4.57	□□□□□ -1.68
UBC4	YBR082C	YFH1	Q07540	174 aa		4.57	□□□□□ -1.68
UBC4	YBR082C	YOL118C	Q08259	102 aa		4.57	□□□□□ -1.68
UBC4	YBR082C	YOR292C	Q08743	309 aa		4.57	□□□□□ -1.68
UBC4	YBR082C	AEP3	Q12089	606 aa		4.57	□□□□□ -1.68
UBC4	YBR082C	RFM1	Q12192	310 aa		4.57	□□□□□ -1.68
UBC4	YBR082C	YLR108C	Q12259	485 aa		4.57	□□□□□ -1.68
UBC4	YBR082C	HUG1	Q6Q5K6	68 aa		4.57	□□□□□ -1.68
UBC4	YBR082C	ISN1	Q99312	450 aa		4.57	□□□□□ -1.68
UBC4	YBR082C	YBR085C-A	O43137	85 aa		4.56	□□□□□ -1.68
UBC4	YBR082C	DBP2	P24783	546 aa	Known RBP	4.56	□□□□□ -1.68
UBC4	YBR082C	DAL80	P26343	269 aa		4.56	□□□□□ -1.68
UBC4	YBR082C	ERG2	P32352	222 aa		4.56	□□□□□ -1.68
UBC4	YBR082C	COQ2	P32378	372 aa		4.56	□□□□□ -1.68
UBC4	YBR082C	SHM2	P37291	469 aa	Known RBP	4.56	□□□□□ -1.68
UBC4	YBR082C	LSM12	P38828	187 aa	Known RBP	4.56	□□□□□ -1.68
UBC4	YBR082C	ECM14	P38836	430 aa		4.56	□□□□□ -1.68
UBC4	YBR082C	ASP1	P38986	381 aa	Predicted RBP	4.56	□□□□□ -1.68
UBC4	YBR082C	GCV3	P39726	170 aa	Predicted RBP	4.56	□□□□□ -1.68
UBC4	YBR082C	PCL7	P40186	285 aa		4.56	□□□□□ -1.68
UBC4	YBR082C	PRM5	P40476	318 aa		4.56	□□□□□ -1.68
UBC4	YBR082C	QRI1	P43123	477 aa	Known RBP	4.56	□□□□□ -1.68
UBC4	YBR082C	BNA2	P47125	453 aa		4.56	□□□□□ -1.68
UBC4	YBR082C	CWC25	P53854	179 aa	Known RBP	4.56	□□□□□ -1.68
UBC4	YBR082C	MRPL22	P53881	309 aa		4.56	□□□□□ -1.68
UBC4	YBR082C	YNL092W	P53934	400 aa		4.56	□□□□□ -1.68
UBC4	YBR082C	TIM44	Q01852	431 aa		4.56	□□□□□ -1.68
UBC4	YBR082C	GMC1	Q04399	608 aa		4.56	□□□□□ -1.68
UBC4	YBR082C	YTH1	Q06102	208 aa	Predicted RBP	4.56	□□□□□ -1.68
UBC4	YBR082C	YDL086W	Q07505	273 aa		4.56	□□□□□ -1.68
UBC4	YBR082C	DGK1	Q12382	290 aa		4.56	□□□□□ -1.68
UBC4	YBR082C	SRY1	P36007	326 aa		4.55	□□□□□ -1.68
UBC4	YBR082C	YEA6	P39953	335 aa		4.55	□□□□□ -1.68
UBC4	YBR082C	SLM1	P40485	686 aa		4.55	□□□□□ -1.68
UBC4	YBR082C	YJR012C	P47087	207 aa		4.55	□□□□□ -1.68
UBC4	YBR082C	XPT1	P47165	209 aa		4.55	□□□□□ -1.68
UBC4	YBR082C	UBC12	P52491	188 aa		4.55	□□□□□ -1.68
UBC4	YBR082C	YGL117W	P53133	265 aa		4.55	□□□□□ -1.68
UBC4	YBR082C	YNL046W	P53956	172 aa		4.55	□□□□□ -1.68
UBC4	YBR082C	YDR415C	Q04033	374 aa	Predicted RBP	4.55	□□□□□ -1.68
UBC4	YBR082C	ERP1	Q05359	219 aa	Known RBP	4.55	□□□□□ -1.68
UBC4	YBR082C	RRP15	Q06511	250 aa	Predicted RBP	4.55	□□□□□ -1.68
UBC4	YBR082C	BER1	Q06688	274 aa	Known RBP	4.55	□□□□□ -1.68
UBC4	YBR082C	PAM18	Q07914	168 aa		4.55	□□□□□ -1.68
UBC4	YBR082C	UBI4	P0CG63	381 aa	Known RBP	4.54	□□□□□ -1.68
UBC4	YBR082C	CUP1-1	P0CX80	61 aa		4.54	□□□□□ -1.68
UBC4	YBR082C	CUP1-2	P0CX81	61 aa		4.54	□□□□□ -1.68
UBC4	YBR082C	LSB5	P25369	354 aa		4.54	□□□□□ -1.68
UBC4	YBR082C	RPD3	P32561	433 aa		4.54	□□□□□ -1.68
UBC4	YBR082C	MTR2	P34232	184 aa	Known RBP	4.54	□□□□□ -1.68
UBC4	YBR082C	IKI1	P38874	309 aa		4.54	□□□□□ -1.68
UBC4	YBR082C	GLR1	P41921	483 aa	Known RBP	4.54	□□□□□ -1.68
UBC4	YBR082C	AGX1	P43567	385 aa		4.54	□□□□□ -1.68
UBC4	YBR082C	BUL1	P48524	976 aa		4.54	□□□□□ -1.68
UBC4	YBR082C	WSC2	P53832	503 aa		4.54	□□□□□ -1.68
UBC4	YBR082C	YIF1	P53845	314 aa	Known RBP	4.54	□□□□□ -1.68
UBC4	YBR082C	TIM10	P87108	93 aa		4.54	□□□□□ -1.68
UBC4	YBR082C	RPL21A	Q02753	160 aa	Known RBP	4.54	□□□□□ -1.68
UBC4	YBR082C	YMR090W	Q04304	227 aa	Known RBP	4.54	□□□□□ -1.68
UBC4	YBR082C	ECM18	Q04623	453 aa		4.54	□□□□□ -1.68
UBC4	YBR082C	ASM4	Q05166	528 aa		4.54	□□□□□ -1.68
UBC4	YBR082C	RPL21B	Q12672	160 aa	Known RBP	4.54	□□□□□ -1.68
UBC4	YBR082C	GDH1	P07262	454 aa	Known RBP	4.53	□□□□□ -1.68
UBC4	YBR082C	ISC10	P32645	267 aa		4.53	□□□□□ -1.68
UBC4	YBR082C	EMP24	P32803	203 aa	Known RBP	4.53	□□□□□ -1.68
UBC4	YBR082C	CPR5	P35176	225 aa		4.53	□□□□□ -1.68
UBC4	YBR082C	ECM31	P38122	312 aa		4.53	□□□□□ -1.68
UBC4	YBR082C	CTR2	P38865	189 aa		4.53	□□□□□ -1.68
UBC4	YBR082C	RFC2	P40348	353 aa		4.53	□□□□□ -1.68
UBC4	YBR082C	AIR1	P40507	360 aa	Known RBP	4.53	□□□□□ -1.68
UBC4	YBR082C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.53	□□□□□ -1.68	not detected
UBC4	YBR082C	PIR5	P46999	287 aa		4.53	□□□□□ -1.68
UBC4	YBR082C	TTI2	P47168	421 aa		4.53	□□□□□ -1.68
UBC4	YBR082C	YGL262W	P53054	175 aa		4.53	□□□□□ -1.68
UBC4	YBR082C	MSO1	P53604	210 aa	Known RBP	4.53	□□□□□ -1.68
UBC4	YBR082C	EST3	Q03096	181 aa		4.53	□□□□□ -1.68
UBC4	YBR082C	LPP1	Q04396	274 aa		4.53	□□□□□ -1.68
UBC4	YBR082C	PML1	Q07930	204 aa	Predicted RBP	4.53	□□□□□ -1.68
UBC4	YBR082C	HRD1	Q08109	551 aa		4.53	□□□□□ -1.68
UBC4	YBR082C	ATG5	Q12380	294 aa		4.53	□□□□□ -1.68
UBC4	YBR082C	AIM45	Q12480	344 aa	Known RBP	4.53	□□□□□ -1.68
UBC4	YBR082C	ATP10	P18496	279 aa		4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 21.6 ms