RNA–Protein interactions for RNA: ENST00000561630.1

CDR2-202, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-202ENST00000561630 SLC8B1Q6J4K2 584 aa25.87■■□□□ 1.73
CDR2-202ENST00000561630 CRELD2Q6UXH1 353 aaPredicted RBP25.87■■□□□ 1.73
CDR2-202ENST00000561630 OTOP3Q7RTS5 596 aa25.87■■□□□ 1.73
CDR2-202ENST00000561630 SYCP3Q8IZU3 236 aa25.87■■□□□ 1.73
CDR2-202ENST00000561630 PLCD3Q8N3E9 789 aa25.87■■□□□ 1.73
CDR2-202ENST00000561630 BEST2Q8NFU1 509 aa25.87■■□□□ 1.73
CDR2-202ENST00000561630 PYM1Q9BRP8 204 aaKnown RBP25.87■■□□□ 1.73
CDR2-202ENST00000561630 TMEM206Q9H813 350 aa25.87■■□□□ 1.73
CDR2-202ENST00000561630 KCNH3Q9ULD8 1083 aa25.87■■□□□ 1.73
CDR2-202ENST00000561630 C2CD2Q9Y426 696 aa25.87■■□□□ 1.73
CDR2-202ENST00000561630 PLXNA3P51805 1871 aa25.87■■□□□ 1.73
CDR2-202ENST00000561630 H7C4K7 107 aa25.86■■□□□ 1.73
CDR2-202ENST00000561630 PRPF6O94906 941 aaKnown RBP25.86■■□□□ 1.73
CDR2-202ENST00000561630 NFICP08651 508 aa25.86■■□□□ 1.73
CDR2-202ENST00000561630 HNRNPA1P09651 372 aaKnown RBP eCLIP25.86■■□□□ 1.73
CDR2-202ENST00000561630 AARSP49588 968 aaKnown RBP eCLIP25.86■■□□□ 1.73
CDR2-202ENST00000561630 ZXDAP98168 799 aa25.86■■□□□ 1.73
CDR2-202ENST00000561630 BECN1Q14457 450 aa25.86■■□□□ 1.73
CDR2-202ENST00000561630 TMEM132DQ14C87 1099 aa25.86■■□□□ 1.73
CDR2-202ENST00000561630 PTPN21Q16825 1174 aa25.86■■□□□ 1.73
CDR2-202ENST00000561630 STXBP4Q6ZWJ1 553 aa25.86■■□□□ 1.73
CDR2-202ENST00000561630 APPL2Q8NEU8 664 aa25.86■■□□□ 1.73
CDR2-202ENST00000561630 ATP6V1DQ9Y5K8 247 aa25.86■■□□□ 1.73
CDR2-202ENST00000561630 VWA8A3KMH1 1905 aa25.85■■□□□ 1.73
CDR2-202ENST00000561630 M0QZQ0 153 aa25.85■■□□□ 1.73
CDR2-202ENST00000561630 C8AP07357 584 aa25.85■■□□□ 1.73
CDR2-202ENST00000561630 GARTP22102 1010 aa25.85■■□□□ 1.73
CDR2-202ENST00000561630 UVSSAQ2YD98 709 aa25.85■■□□□ 1.73
CDR2-202ENST00000561630 GLIS3Q8NEA6 775 aa25.85■■□□□ 1.73
CDR2-202ENST00000561630 HPS3Q969F9 1004 aa25.85■■□□□ 1.73
CDR2-202ENST00000561630 ACSF2Q96CM8 615 aaPredicted RBP25.85■■□□□ 1.73
CDR2-202ENST00000561630 CHAMP1Q96JM3 812 aa25.85■■□□□ 1.73
CDR2-202ENST00000561630 SPATA32Q96LK8 384 aa25.85■■□□□ 1.73
CDR2-202ENST00000561630 PIDD1Q9HB75 910 aa25.85■■□□□ 1.73
CDR2-202ENST00000561630 PCDHB8Q9UN66 801 aa25.85■■□□□ 1.73
CDR2-202ENST00000561630 CLUHO75153 1309 aa25.85■■□□□ 1.73
CDR2-202ENST00000561630 COL9A1P20849 921 aa25.84■■□□□ 1.73
CDR2-202ENST00000561630 CMA1P23946 247 aa25.84■■□□□ 1.73
CDR2-202ENST00000561630 HOXA9P31269 272 aa25.84■■□□□ 1.73
CDR2-202ENST00000561630 PPM1LQ5SGD2 360 aa25.84■■□□□ 1.73
CDR2-202ENST00000561630 RTL10Q7L3V2 364 aa25.84■■□□□ 1.73
CDR2-202ENST00000561630 ZNF461Q8TAF7 563 aa25.84■■□□□ 1.73
CDR2-202ENST00000561630 FAM213AQ9BRX8 229 aa25.84■■□□□ 1.73
CDR2-202ENST00000561630 IL18RAPO95256 599 aa25.83■■□□□ 1.73
CDR2-202ENST00000561630 LDHAP00338 332 aaKnown RBP25.83■■□□□ 1.73
CDR2-202ENST00000561630 PAX3P23760 479 aa25.83■■□□□ 1.73
CDR2-202ENST00000561630 ROR1Q01973 937 aa25.83■■□□□ 1.73
CDR2-202ENST00000561630 EHHADHQ08426 723 aa25.83■■□□□ 1.73
CDR2-202ENST00000561630 C9orf57Q5W0N0 161 aa25.83■■□□□ 1.73
CDR2-202ENST00000561630 TRIM67Q6ZTA4 783 aa25.83■■□□□ 1.73
CDR2-202ENST00000561630 UNC13DQ70J99 1090 aa25.83■■□□□ 1.73
CDR2-202ENST00000561630 SLC7A14Q8TBB6 771 aa25.83■■□□□ 1.73
CDR2-202ENST00000561630 CBWD1Q9BRT8 395 aa25.83■■□□□ 1.73
CDR2-202ENST00000561630 LIMD1Q9UGP4 676 aa25.83■■□□□ 1.73
CDR2-202ENST00000561630 FBXL5Q9UKA1 691 aa25.83■■□□□ 1.73
CDR2-202ENST00000561630 ANO9A1A5B4 782 aa25.82■■□□□ 1.72
CDR2-202ENST00000561630 PIRO00625 290 aa25.82■■□□□ 1.72
CDR2-202ENST00000561630 PPEF2O14830 753 aa25.82■■□□□ 1.72
CDR2-202ENST00000561630 EIF3DO15371 548 aaKnown RBP eCLIP25.82■■□□□ 1.72
CDR2-202ENST00000561630 N4BP1O75113 896 aaKnown RBP25.82■■□□□ 1.72
CDR2-202ENST00000561630 ABLIM3O94929 683 aa25.82■■□□□ 1.72
CDR2-202ENST00000561630 POU2F2P09086 479 aa25.82■■□□□ 1.72
CDR2-202ENST00000561630 SLFN14P0C7P3 912 aa25.82■■□□□ 1.72
CDR2-202ENST00000561630 CASP1P29466 404 aa25.82■■□□□ 1.72
CDR2-202ENST00000561630 LILRA4P59901 499 aa25.82■■□□□ 1.72
CDR2-202ENST00000561630 CTXN3Q4LDR2 81 aa25.82■■□□□ 1.72
CDR2-202ENST00000561630 FAM26FQ5R3K3 315 aa25.82■■□□□ 1.72
CDR2-202ENST00000561630 ZNF280DQ6N043 979 aa25.82■■□□□ 1.72
CDR2-202ENST00000561630 EPM2AIP1Q7L775 607 aaPredicted RBP25.82■■□□□ 1.72
CDR2-202ENST00000561630 CEP57L1Q8IYX8 460 aa25.82■■□□□ 1.72
CDR2-202ENST00000561630 ZSWIM2Q8NEG5 633 aa25.82■■□□□ 1.72
CDR2-202ENST00000561630 SAAL1Q96ER3 474 aa25.82■■□□□ 1.72
CDR2-202ENST00000561630 BLZF1Q9H2G9 400 aa25.82■■□□□ 1.72
CDR2-202ENST00000561630 PDCD11Q14690 1871 aaKnown RBP25.81■■□□□ 1.72
CDR2-202ENST00000561630 PVALEFA0A1B0GWK0 134 aa25.81■■□□□ 1.72
CDR2-202ENST00000561630 WDR27A2RRH5 827 aa25.81■■□□□ 1.72
CDR2-202ENST00000561630 EXTL3O43909 919 aa25.81■■□□□ 1.72
CDR2-202ENST00000561630 OAZ2O95190 189 aa25.81■■□□□ 1.72
CDR2-202ENST00000561630 HOXD13P35453 343 aa25.81■■□□□ 1.72
CDR2-202ENST00000561630 AFMP43652 599 aa25.81■■□□□ 1.72
CDR2-202ENST00000561630 NT5DC4Q86YG4 428 aa25.81■■□□□ 1.72
CDR2-202ENST00000561630 BRSK2Q8IWQ3 736 aa25.81■■□□□ 1.72
CDR2-202ENST00000561630 SCAND2PQ9GZW5 306 aaPredicted RBP25.81■■□□□ 1.72
CDR2-202ENST00000561630 SERTAD1Q9UHV2 236 aa25.81■■□□□ 1.72
CDR2-202ENST00000561630 SORCS3Q9UPU3 1222 aa25.81■■□□□ 1.72
CDR2-202ENST00000561630 KIAA0391O15091 583 aaKnown RBP25.8■■□□□ 1.72
CDR2-202ENST00000561630 ACTN4O43707 911 aaKnown RBP25.8■■□□□ 1.72
CDR2-202ENST00000561630 XYLBO75191 536 aa25.8■■□□□ 1.72
CDR2-202ENST00000561630 ATF2P15336 505 aa25.8■■□□□ 1.72
CDR2-202ENST00000561630 PFKFB1P16118 471 aa25.8■■□□□ 1.72
CDR2-202ENST00000561630 CUL4BQ13620 913 aa25.8■■□□□ 1.72
CDR2-202ENST00000561630 TPGS2Q68CL5 300 aa25.8■■□□□ 1.72
CDR2-202ENST00000561630 DSTYKQ6XUX3 929 aa25.8■■□□□ 1.72
CDR2-202ENST00000561630 EFCAB13Q8IY85 973 aa25.8■■□□□ 1.72
CDR2-202ENST00000561630 ZNF507Q8TCN5 953 aa25.8■■□□□ 1.72
CDR2-202ENST00000561630 DPP3Q9NY33 737 aa25.8■■□□□ 1.72
CDR2-202ENST00000561630 HPSEQ9Y251 543 aa25.8■■□□□ 1.72
CDR2-202ENST00000561630 TIMM13Q9Y5L4 95 aaPredicted RBP25.8■■□□□ 1.72
CDR2-202ENST00000561630 DENND4AQ7Z401 1863 aa25.79■■□□□ 1.72
CDR2-202ENST00000561630 A0A1B0GVL5 298 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms