RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 GTF2H1P32780 548 aa18.99■□□□□ 0.63
MCF2L-221ENST00000469415 TCF7P36402 384 aaPredicted RBP18.99■□□□□ 0.63
MCF2L-221ENST00000469415 ITGA8P53708 1063 aa18.99■□□□□ 0.63
MCF2L-221ENST00000469415 MYL6P60660 151 aa18.99■□□□□ 0.63
MCF2L-221ENST00000469415 GJC2Q5T442 439 aaPredicted RBP18.99■□□□□ 0.63
MCF2L-221ENST00000469415 PRMT1Q99873 361 aaKnown RBP18.99■□□□□ 0.63
MCF2L-221ENST00000469415 TIPINQ9BVW5 301 aa18.99■□□□□ 0.63
MCF2L-221ENST00000469415 CDC42EP4Q9H3Q1 356 aaKnown RBP18.99■□□□□ 0.63
MCF2L-221ENST00000469415 DDX20Q9UHI6 824 aaKnown RBP18.99■□□□□ 0.63
MCF2L-221ENST00000469415 A0A087WUV0 522 aaPredicted RBP18.99■□□□□ 0.63
MCF2L-221ENST00000469415 GOLGA6L7A0A1B0GV03 622 aa18.99■□□□□ 0.63
MCF2L-221ENST00000469415 FAM107AO95990 144 aa18.99■□□□□ 0.63
MCF2L-221ENST00000469415 C4BPAP04003 597 aaKnown RBP18.99■□□□□ 0.63
MCF2L-221ENST00000469415 UNGP13051 313 aaPredicted RBP18.99■□□□□ 0.63
MCF2L-221ENST00000469415 STAT5BP51692 787 aa18.99■□□□□ 0.63
MCF2L-221ENST00000469415 CAPSQ13938 189 aa18.99■□□□□ 0.63
MCF2L-221ENST00000469415 RHPN2Q8IUC4 686 aa18.99■□□□□ 0.63
MCF2L-221ENST00000469415 EFCAB13Q8IY85 973 aa18.99■□□□□ 0.63
MCF2L-221ENST00000469415 C1orf131Q8NDD1 294 aaKnown RBP18.99■□□□□ 0.63
MCF2L-221ENST00000469415 DYDC1Q8WWB3 177 aa18.99■□□□□ 0.63
MCF2L-221ENST00000469415 HOXC10Q9NYD6 342 aa18.99■□□□□ 0.63
MCF2L-221ENST00000469415 INO80B-WBP1J3KQ70 363 aa18.98■□□□□ 0.63
MCF2L-221ENST00000469415 GARTP22102 1010 aa18.98■□□□□ 0.63
MCF2L-221ENST00000469415 SYCP2LQ5T4T6 812 aa18.98■□□□□ 0.63
MCF2L-221ENST00000469415 GDAP1Q8TB36 358 aa18.98■□□□□ 0.63
MCF2L-221ENST00000469415 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.98■□□□□ 0.63
MCF2L-221ENST00000469415 INO80BQ9C086 356 aaPredicted RBP18.98■□□□□ 0.63
MCF2L-221ENST00000469415 PDLIM7Q9NR12 457 aa18.98■□□□□ 0.63
MCF2L-221ENST00000469415 RBBP6Q7Z6E9 1792 aaKnown RBP18.98■□□□□ 0.63
MCF2L-221ENST00000469415 ADM5C9JUS6 153 aa18.98■□□□□ 0.63
MCF2L-221ENST00000469415 PODXLO00592 558 aa18.98■□□□□ 0.63
MCF2L-221ENST00000469415 RAP1GAPP47736 663 aa18.98■□□□□ 0.63
MCF2L-221ENST00000469415 VGLL4Q14135 290 aa18.98■□□□□ 0.63
MCF2L-221ENST00000469415 SMTNL2Q2TAL5 461 aa18.98■□□□□ 0.63
MCF2L-221ENST00000469415 HSDL1Q3SXM5 330 aa18.98■□□□□ 0.63
MCF2L-221ENST00000469415 TXNRD3NBQ6F5E7 133 aa18.98■□□□□ 0.63
MCF2L-221ENST00000469415 HOOK3Q86VS8 718 aa18.98■□□□□ 0.63
MCF2L-221ENST00000469415 GLIS1Q8NBF1 620 aa18.98■□□□□ 0.63
MCF2L-221ENST00000469415 ELP3Q9H9T3 547 aa18.98■□□□□ 0.63
MCF2L-221ENST00000469415 MAP3K20Q9NYL2 800 aaKnown RBP18.98■□□□□ 0.63
MCF2L-221ENST00000469415 TJP2Q9UDY2 1190 aa18.98■□□□□ 0.63
MCF2L-221ENST00000469415 PCYOX1Q9UHG3 505 aa18.98■□□□□ 0.63
MCF2L-221ENST00000469415 GOLGA8MH3BSY2 632 aa18.98■□□□□ 0.63
MCF2L-221ENST00000469415 RIPK2O43353 540 aa18.98■□□□□ 0.63
MCF2L-221ENST00000469415 GCNT1Q02742 428 aa18.98■□□□□ 0.63
MCF2L-221ENST00000469415 DCUN1D2Q6PH85 259 aa18.98■□□□□ 0.63
MCF2L-221ENST00000469415 THOC1Q96FV9 657 aaKnown RBP18.98■□□□□ 0.63
MCF2L-221ENST00000469415 RNF19AQ9NV58 838 aa18.98■□□□□ 0.63
MCF2L-221ENST00000469415 F8VP50 259 aa18.97■□□□□ 0.63
MCF2L-221ENST00000469415 MEFVO15553 781 aaPredicted RBP18.97■□□□□ 0.63
MCF2L-221ENST00000469415 B4GALT5O43286 388 aa18.97■□□□□ 0.63
MCF2L-221ENST00000469415 ZKSCAN8Q15776 578 aaPredicted RBP18.97■□□□□ 0.63
MCF2L-221ENST00000469415 KCNT1Q5JUK3 1230 aa18.97■□□□□ 0.63
MCF2L-221ENST00000469415 SLC17A8Q8NDX2 589 aa18.97■□□□□ 0.63
MCF2L-221ENST00000469415 CLMNQ96JQ2 1002 aa18.97■□□□□ 0.63
MCF2L-221ENST00000469415 MCEEQ96PE7 176 aa18.97■□□□□ 0.63
MCF2L-221ENST00000469415 PCYT2Q99447 389 aa18.97■□□□□ 0.63
MCF2L-221ENST00000469415 PAIP2Q9BPZ3 127 aaKnown RBP18.97■□□□□ 0.63
MCF2L-221ENST00000469415 PORCNQ9H237 461 aa18.97■□□□□ 0.63
MCF2L-221ENST00000469415 BHMG1C9JSJ3 638 aaPredicted RBP18.97■□□□□ 0.63
MCF2L-221ENST00000469415 DKC1O60832 514 aaKnown RBP eCLIP18.97■□□□□ 0.63
MCF2L-221ENST00000469415 DDNO94850 711 aaPredicted RBP18.97■□□□□ 0.63
MCF2L-221ENST00000469415 ZNF365Q70YC5 407 aa18.97■□□□□ 0.63
MCF2L-221ENST00000469415 CDHR1Q96JP9 859 aa18.97■□□□□ 0.63
MCF2L-221ENST00000469415 IMPG2Q9BZV3 1241 aa18.97■□□□□ 0.63
MCF2L-221ENST00000469415 INTS9Q9NV88 658 aaKnown RBP18.97■□□□□ 0.63
MCF2L-221ENST00000469415 NOP56O00567 594 aaKnown RBP18.96■□□□□ 0.63
MCF2L-221ENST00000469415 MAPK13O15264 365 aa18.96■□□□□ 0.63
MCF2L-221ENST00000469415 MAFGO15525 162 aa18.96■□□□□ 0.63
MCF2L-221ENST00000469415 TRAPPC3O43617 180 aa18.96■□□□□ 0.63
MCF2L-221ENST00000469415 CDH8P55286 799 aa18.96■□□□□ 0.63
MCF2L-221ENST00000469415 GHRHRQ02643 423 aa18.96■□□□□ 0.63
MCF2L-221ENST00000469415 PSMD6Q15008 389 aa18.96■□□□□ 0.63
MCF2L-221ENST00000469415 PPP2R5EQ16537 467 aa18.96■□□□□ 0.63
MCF2L-221ENST00000469415 EP400NLQ6ZTU2 488 aa18.96■□□□□ 0.63
MCF2L-221ENST00000469415 ELAC2Q9BQ52 826 aaKnown RBP18.96■□□□□ 0.63
MCF2L-221ENST00000469415 TXLNGYQ9BZA5 131 aa18.96■□□□□ 0.63
MCF2L-221ENST00000469415 ANAPC5Q9UJX4 755 aa18.96■□□□□ 0.63
MCF2L-221ENST00000469415 GINS2Q9Y248 185 aa18.96■□□□□ 0.63
MCF2L-221ENST00000469415 ARIH2O95376 493 aa18.96■□□□□ 0.63
MCF2L-221ENST00000469415 ATF2P15336 505 aa18.96■□□□□ 0.63
MCF2L-221ENST00000469415 HADHBP55084 474 aaKnown RBP18.96■□□□□ 0.63
MCF2L-221ENST00000469415 MAMLD1Q13495 774 aa18.96■□□□□ 0.63
MCF2L-221ENST00000469415 LIN9Q5TKA1 542 aa18.96■□□□□ 0.63
MCF2L-221ENST00000469415 TEX2Q8IWB9 1127 aa18.96■□□□□ 0.63
MCF2L-221ENST00000469415 ZNF606Q8WXB4 792 aa18.96■□□□□ 0.63
MCF2L-221ENST00000469415 VTI1AQ96AJ9 217 aa18.96■□□□□ 0.63
MCF2L-221ENST00000469415 SEC16BQ96JE7 1060 aa18.96■□□□□ 0.63
MCF2L-221ENST00000469415 XPO6Q96QU8 1125 aaKnown RBP18.96■□□□□ 0.63
MCF2L-221ENST00000469415 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.96■□□□□ 0.63
MCF2L-221ENST00000469415 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.96■□□□□ 0.63
MCF2L-221ENST00000469415 ALDH5A1P51649 535 aaPredicted RBP18.95■□□□□ 0.62
MCF2L-221ENST00000469415 TGFB2P61812 414 aa18.95■□□□□ 0.62
MCF2L-221ENST00000469415 AGBL2Q5U5Z8 902 aa18.95■□□□□ 0.62
MCF2L-221ENST00000469415 CCDC121Q6ZUS5 278 aa18.95■□□□□ 0.62
MCF2L-221ENST00000469415 EIF1ADQ8N9N8 165 aaKnown RBP18.95■□□□□ 0.62
MCF2L-221ENST00000469415 PLVAPQ9BX97 442 aa18.95■□□□□ 0.62
MCF2L-221ENST00000469415 ZWILCHQ9H900 591 aa18.95■□□□□ 0.62
MCF2L-221ENST00000469415 C17orf75Q9HAS0 396 aa18.95■□□□□ 0.62
MCF2L-221ENST00000469415 ZNF148Q9UQR1 794 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms