RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 CUL4BQ13620 913 aa14.91□□□□□ -0.02
LTBR-202ENST00000440421 RAB33AQ14088 237 aa14.91□□□□□ -0.02
LTBR-202ENST00000440421 FAM26FQ5R3K3 315 aa14.91□□□□□ -0.02
LTBR-202ENST00000440421 LIN9Q5TKA1 542 aa14.91□□□□□ -0.02
LTBR-202ENST00000440421 SPATA1Q5VX52 437 aa14.91□□□□□ -0.02
LTBR-202ENST00000440421 CNNM4Q6P4Q7 775 aa14.91□□□□□ -0.02
LTBR-202ENST00000440421 CCDC149Q6ZUS6 474 aa14.91□□□□□ -0.02
LTBR-202ENST00000440421 UNC13DQ70J99 1090 aa14.91□□□□□ -0.02
LTBR-202ENST00000440421 CMASQ8NFW8 434 aaPredicted RBP14.91□□□□□ -0.02
LTBR-202ENST00000440421 HDAC7Q8WUI4 952 aa14.91□□□□□ -0.02
LTBR-202ENST00000440421 SMG7Q92540 1137 aaKnown RBP14.91□□□□□ -0.02
LTBR-202ENST00000440421 SUSD3Q96L08 255 aa14.91□□□□□ -0.02
LTBR-202ENST00000440421 TSPAN18Q96SJ8 248 aa14.91□□□□□ -0.02
LTBR-202ENST00000440421 PYM1Q9BRP8 204 aaKnown RBP14.91□□□□□ -0.02
LTBR-202ENST00000440421 CBWD1Q9BRT8 395 aa14.91□□□□□ -0.02
LTBR-202ENST00000440421 PCIF1Q9H4Z3 704 aa14.91□□□□□ -0.02
LTBR-202ENST00000440421 ASB7Q9H672 318 aa14.91□□□□□ -0.02
LTBR-202ENST00000440421 PIDD1Q9HB75 910 aa14.91□□□□□ -0.02
LTBR-202ENST00000440421 GDPD2Q9HCC8 539 aa14.91□□□□□ -0.02
LTBR-202ENST00000440421 FBXW11Q9UKB1 542 aa14.91□□□□□ -0.02
LTBR-202ENST00000440421 BACE2Q9Y5Z0 518 aa14.91□□□□□ -0.02
LTBR-202ENST00000440421 ANK1P16157 1881 aa14.91□□□□□ -0.02
LTBR-202ENST00000440421 MUC3AQ02505 3323 aa14.91□□□□□ -0.02
LTBR-202ENST00000440421 MTCL1Q9Y4B5 1905 aaKnown RBP14.9□□□□□ -0.02
LTBR-202ENST00000440421 ACTN4O43707 911 aaKnown RBP14.9□□□□□ -0.02
LTBR-202ENST00000440421 ZMYND10O75800 440 aa14.9□□□□□ -0.02
LTBR-202ENST00000440421 C1RP00736 705 aa14.9□□□□□ -0.02
LTBR-202ENST00000440421 C8AP07357 584 aa14.9□□□□□ -0.02
LTBR-202ENST00000440421 TMEM31Q5JXX7 168 aa14.9□□□□□ -0.02
LTBR-202ENST00000440421 ARMCX5Q6P1M9 558 aa14.9□□□□□ -0.02
LTBR-202ENST00000440421 TDRD5Q8NAT2 981 aaKnown RBP14.9□□□□□ -0.02
LTBR-202ENST00000440421 ZNF707Q96C28 371 aaPredicted RBP14.9□□□□□ -0.02
LTBR-202ENST00000440421 SCAND2PQ9GZW5 306 aaPredicted RBP14.9□□□□□ -0.02
LTBR-202ENST00000440421 C11orf16Q9NQ32 467 aa14.9□□□□□ -0.02
LTBR-202ENST00000440421 ZDHHC7Q9NXF8 308 aa14.9□□□□□ -0.02
LTBR-202ENST00000440421 DERAQ9Y315 318 aa14.9□□□□□ -0.02
LTBR-202ENST00000440421 TIMM13Q9Y5L4 95 aaPredicted RBP14.9□□□□□ -0.02
LTBR-202ENST00000440421 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.9□□□□□ -0.02
LTBR-202ENST00000440421 DENND4AQ7Z401 1863 aa14.89□□□□□ -0.03
LTBR-202ENST00000440421 H7C4K7 107 aa14.89□□□□□ -0.03
LTBR-202ENST00000440421 SLFN14P0C7P3 912 aa14.89□□□□□ -0.03
LTBR-202ENST00000440421 GARTP22102 1010 aa14.89□□□□□ -0.03
LTBR-202ENST00000440421 HOXD13P35453 343 aa14.89□□□□□ -0.03
LTBR-202ENST00000440421 WNT7BP56706 349 aa14.89□□□□□ -0.03
LTBR-202ENST00000440421 CTXN3Q4LDR2 81 aa14.89□□□□□ -0.03
LTBR-202ENST00000440421 PPM1LQ5SGD2 360 aa14.89□□□□□ -0.03
LTBR-202ENST00000440421 C9orf57Q5W0N0 161 aa14.89□□□□□ -0.03
LTBR-202ENST00000440421 DSTYKQ6XUX3 929 aa14.89□□□□□ -0.03
LTBR-202ENST00000440421 NELFCDQ8IXH7 590 aa14.89□□□□□ -0.03
LTBR-202ENST00000440421 EFCAB13Q8IY85 973 aa14.89□□□□□ -0.03
LTBR-202ENST00000440421 APPL2Q8NEU8 664 aa14.89□□□□□ -0.03
LTBR-202ENST00000440421 SLC7A14Q8TBB6 771 aa14.89□□□□□ -0.03
LTBR-202ENST00000440421 PAGE5Q96GU1 130 aa14.89□□□□□ -0.03
LTBR-202ENST00000440421 LRFN3Q9BTN0 628 aa14.89□□□□□ -0.03
LTBR-202ENST00000440421 PRKD2Q9BZL6 878 aa14.89□□□□□ -0.03
LTBR-202ENST00000440421 SLC39A2Q9NP94 309 aa14.89□□□□□ -0.03
LTBR-202ENST00000440421 DPP3Q9NY33 737 aa14.89□□□□□ -0.03
LTBR-202ENST00000440421 RBAKQ9NYW8 714 aaPredicted RBP14.89□□□□□ -0.03
LTBR-202ENST00000440421 FBXL5Q9UKA1 691 aa14.89□□□□□ -0.03
LTBR-202ENST00000440421 PCDHB8Q9UN66 801 aa14.89□□□□□ -0.03
LTBR-202ENST00000440421 POLIQ9UNA4 740 aa14.89□□□□□ -0.03
LTBR-202ENST00000440421 HPSEQ9Y251 543 aa14.89□□□□□ -0.03
LTBR-202ENST00000440421 C2CD2Q9Y426 696 aa14.89□□□□□ -0.03
LTBR-202ENST00000440421 TCHHQ07283 1943 aa14.89□□□□□ -0.03
LTBR-202ENST00000440421 PVALEFA0A1B0GWK0 134 aa14.88□□□□□ -0.03
LTBR-202ENST00000440421 M0QZQ0 153 aa14.88□□□□□ -0.03
LTBR-202ENST00000440421 EIF3DO15371 548 aaKnown RBP eCLIP14.88□□□□□ -0.03
LTBR-202ENST00000440421 CCL16O15467 120 aa14.88□□□□□ -0.03
LTBR-202ENST00000440421 EXTL3O43909 919 aa14.88□□□□□ -0.03
LTBR-202ENST00000440421 IL18RAPO95256 599 aa14.88□□□□□ -0.03
LTBR-202ENST00000440421 LDHAP00338 332 aaKnown RBP14.88□□□□□ -0.03
LTBR-202ENST00000440421 NDUFA8P51970 172 aa14.88□□□□□ -0.03
LTBR-202ENST00000440421 ROR1Q01973 937 aa14.88□□□□□ -0.03
LTBR-202ENST00000440421 MRPL58Q14197 206 aaKnown RBP14.88□□□□□ -0.03
LTBR-202ENST00000440421 SLC8B1Q6J4K2 584 aa14.88□□□□□ -0.03
LTBR-202ENST00000440421 ZNF280DQ6N043 979 aa14.88□□□□□ -0.03
LTBR-202ENST00000440421 CYP26C1Q6V0L0 522 aa14.88□□□□□ -0.03
LTBR-202ENST00000440421 EPM2AIP1Q7L775 607 aaPredicted RBP14.88□□□□□ -0.03
LTBR-202ENST00000440421 BRSK2Q8IWQ3 736 aa14.88□□□□□ -0.03
LTBR-202ENST00000440421 FSIP1Q8NA03 581 aa14.88□□□□□ -0.03
LTBR-202ENST00000440421 ZNF507Q8TCN5 953 aa14.88□□□□□ -0.03
LTBR-202ENST00000440421 WDR6Q9NNW5 1121 aaKnown RBP14.88□□□□□ -0.03
LTBR-202ENST00000440421 LIMD1Q9UGP4 676 aa14.88□□□□□ -0.03
LTBR-202ENST00000440421 CLUHO75153 1309 aa14.88□□□□□ -0.03
LTBR-202ENST00000440421 WDR27A2RRH5 827 aa14.87□□□□□ -0.03
LTBR-202ENST00000440421 SPTLC1O15269 473 aa14.87□□□□□ -0.03
LTBR-202ENST00000440421 TBC1D4O60343 1298 aa14.87□□□□□ -0.03
LTBR-202ENST00000440421 GPR37L1O60883 481 aa14.87□□□□□ -0.03
LTBR-202ENST00000440421 ASGR2P07307 311 aa14.87□□□□□ -0.03
LTBR-202ENST00000440421 GBP2P32456 591 aaPredicted RBP14.87□□□□□ -0.03
LTBR-202ENST00000440421 SYKP43405 635 aa14.87□□□□□ -0.03
LTBR-202ENST00000440421 AARSP49588 968 aaKnown RBP eCLIP14.87□□□□□ -0.03
LTBR-202ENST00000440421 LILRA4P59901 499 aa14.87□□□□□ -0.03
LTBR-202ENST00000440421 NUCB2P80303 420 aa14.87□□□□□ -0.03
LTBR-202ENST00000440421 TFAMQ00059 246 aaKnown RBP14.87□□□□□ -0.03
LTBR-202ENST00000440421 POU5F1Q01860 360 aaKnown RBP14.87□□□□□ -0.03
LTBR-202ENST00000440421 YWHAHQ04917 246 aaPredicted RBP14.87□□□□□ -0.03
LTBR-202ENST00000440421 EHHADHQ08426 723 aa14.87□□□□□ -0.03
LTBR-202ENST00000440421 PTPN21Q16825 1174 aa14.87□□□□□ -0.03
LTBR-202ENST00000440421 OTOP3Q7RTS5 596 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms