RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 ICA1LQ8NDH6 482 aa12.02□□□□□ -0.49
NPC1L1-201ENST00000289547 MDM1Q8TC05 714 aa12.02□□□□□ -0.49
NPC1L1-201ENST00000289547 ERP27Q96DN0 273 aa12.02□□□□□ -0.49
NPC1L1-201ENST00000289547 PDCD2LQ9BRP1 358 aa12.02□□□□□ -0.49
NPC1L1-201ENST00000289547 CEP72Q9P209 647 aa12.02□□□□□ -0.49
NPC1L1-201ENST00000289547 PCDHB7Q9Y5E2 793 aa12.02□□□□□ -0.49
NPC1L1-201ENST00000289547 PVALEFA0A1B0GWK0 134 aa12.02□□□□□ -0.49
NPC1L1-201ENST00000289547 POTEFA5A3E0 1075 aa12.02□□□□□ -0.49
NPC1L1-201ENST00000289547 CLIC2O15247 247 aa12.02□□□□□ -0.49
NPC1L1-201ENST00000289547 SUPT3HO75486 399 aa12.02□□□□□ -0.49
NPC1L1-201ENST00000289547 PRKCBP05771 671 aa12.02□□□□□ -0.49
NPC1L1-201ENST00000289547 POTEIP0CG38 1075 aa12.02□□□□□ -0.49
NPC1L1-201ENST00000289547 PTGER2P43116 358 aa12.02□□□□□ -0.49
NPC1L1-201ENST00000289547 PTK2Q05397 1052 aa12.02□□□□□ -0.49
NPC1L1-201ENST00000289547 LRRC36Q1X8D7 754 aa12.02□□□□□ -0.49
NPC1L1-201ENST00000289547 POTEGQ6S5H5 508 aa12.02□□□□□ -0.49
NPC1L1-201ENST00000289547 POTEEQ6S8J3 1075 aa12.02□□□□□ -0.49
NPC1L1-201ENST00000289547 SDCCAG3Q96C92 435 aa12.02□□□□□ -0.49
NPC1L1-201ENST00000289547 SCYL1Q96KG9 808 aa12.02□□□□□ -0.49
NPC1L1-201ENST00000289547 TMEM39AQ9NV64 488 aa12.02□□□□□ -0.49
NPC1L1-201ENST00000289547 NFIBO00712 420 aa12.01□□□□□ -0.49
NPC1L1-201ENST00000289547 SLC16A4O15374 487 aa12.01□□□□□ -0.49
NPC1L1-201ENST00000289547 MED7O43513 233 aa12.01□□□□□ -0.49
NPC1L1-201ENST00000289547 AGTP01019 485 aa12.01□□□□□ -0.49
NPC1L1-201ENST00000289547 GYPCP04921 128 aa12.01□□□□□ -0.49
NPC1L1-201ENST00000289547 EMC2Q15006 297 aa12.01□□□□□ -0.49
NPC1L1-201ENST00000289547 HADHQ16836 314 aaKnown RBP12.01□□□□□ -0.49
NPC1L1-201ENST00000289547 MMGT1Q8N4V1 131 aa12.01□□□□□ -0.49
NPC1L1-201ENST00000289547 ENGASEQ8NFI3 743 aa12.01□□□□□ -0.49
NPC1L1-201ENST00000289547 PPME1Q9Y570 386 aa12.01□□□□□ -0.49
NPC1L1-201ENST00000289547 SALL3Q9BXA9 1300 aa12.01□□□□□ -0.49
NPC1L1-201ENST00000289547 HUS1O60921 280 aa12.01□□□□□ -0.49
NPC1L1-201ENST00000289547 MCF2P10911 925 aa12.01□□□□□ -0.49
NPC1L1-201ENST00000289547 SAT1P21673 171 aa12.01□□□□□ -0.49
NPC1L1-201ENST00000289547 SREBF1P36956 1147 aa12.01□□□□□ -0.49
NPC1L1-201ENST00000289547 TMED10P49755 219 aaKnown RBP12.01□□□□□ -0.49
NPC1L1-201ENST00000289547 GPC3P51654 580 aa12.01□□□□□ -0.49
NPC1L1-201ENST00000289547 GLB1LQ6UWU2 654 aa12.01□□□□□ -0.49
NPC1L1-201ENST00000289547 CRLF3Q8IUI8 442 aa12.01□□□□□ -0.49
NPC1L1-201ENST00000289547 PYROXD1Q8WU10 500 aa12.01□□□□□ -0.49
NPC1L1-201ENST00000289547 NRBF2Q96F24 287 aa12.01□□□□□ -0.49
NPC1L1-201ENST00000289547 PIDD1Q9HB75 910 aa12.01□□□□□ -0.49
NPC1L1-201ENST00000289547 TFR2Q9UP52 801 aa12.01□□□□□ -0.49
NPC1L1-201ENST00000289547 TULP2O00295 520 aa12.01□□□□□ -0.49
NPC1L1-201ENST00000289547 ART3Q13508 389 aa12.01□□□□□ -0.49
NPC1L1-201ENST00000289547 ATG16L1Q676U5 607 aa12.01□□□□□ -0.49
NPC1L1-201ENST00000289547 JADE1Q6IE81 842 aa12.01□□□□□ -0.49
NPC1L1-201ENST00000289547 EFCAB12Q6NXP0 572 aa12.01□□□□□ -0.49
NPC1L1-201ENST00000289547 FGFR4P22455 802 aa12.01□□□□□ -0.49
NPC1L1-201ENST00000289547 NR1H3Q13133 447 aa12.01□□□□□ -0.49
NPC1L1-201ENST00000289547 CYLC2Q14093 348 aaPredicted RBP12.01□□□□□ -0.49
NPC1L1-201ENST00000289547 TMEM259Q4ZIN3 620 aa12.01□□□□□ -0.49
NPC1L1-201ENST00000289547 DDX42Q86XP3 938 aaKnown RBP eCLIP12.01□□□□□ -0.49
NPC1L1-201ENST00000289547 TTC39CQ8N584 583 aa12.01□□□□□ -0.49
NPC1L1-201ENST00000289547 B4GALNT2Q8NHY0 566 aa12.01□□□□□ -0.49
NPC1L1-201ENST00000289547 ZNF560Q96MR9 790 aa12.01□□□□□ -0.49
NPC1L1-201ENST00000289547 MAF1Q9H063 256 aa12.01□□□□□ -0.49
NPC1L1-201ENST00000289547 EHD2Q9NZN4 543 aa12.01□□□□□ -0.49
NPC1L1-201ENST00000289547 DIS3Q9Y2L1 958 aaKnown RBP12.01□□□□□ -0.49
NPC1L1-201ENST00000289547 RGPD2P0DJD1 1756 aa12.01□□□□□ -0.49
NPC1L1-201ENST00000289547 SYNGAP1Q96PV0 1343 aa12.01□□□□□ -0.49
NPC1L1-201ENST00000289547 RGPD1P0DJD0 1748 aa12□□□□□ -0.49
NPC1L1-201ENST00000289547 H7C0C1 242 aa12□□□□□ -0.49
NPC1L1-201ENST00000289547 GRK4P32298 578 aa12□□□□□ -0.49
NPC1L1-201ENST00000289547 ATP5OP48047 213 aa12□□□□□ -0.49
NPC1L1-201ENST00000289547 AP3M2P53677 418 aa12□□□□□ -0.49
NPC1L1-201ENST00000289547 OCA2Q04671 838 aa12□□□□□ -0.49
NPC1L1-201ENST00000289547 SEMA3FQ13275 785 aa12□□□□□ -0.49
NPC1L1-201ENST00000289547 GFM2Q969S9 779 aaKnown RBP12□□□□□ -0.49
NPC1L1-201ENST00000289547 CCDC124Q96CT7 223 aaKnown RBP12□□□□□ -0.49
NPC1L1-201ENST00000289547 IL17RBQ9NRM6 502 aa12□□□□□ -0.49
NPC1L1-201ENST00000289547 TSC22D4Q9Y3Q8 395 aa12□□□□□ -0.49
NPC1L1-201ENST00000289547 PCDHB4Q9Y5E5 795 aa12□□□□□ -0.49
NPC1L1-201ENST00000289547 SCN11AQ9UI33 1791 aa12□□□□□ -0.49
NPC1L1-201ENST00000289547 FAM187AA6NFU0 413 aa12□□□□□ -0.49
NPC1L1-201ENST00000289547 PLA2G6O60733 806 aa12□□□□□ -0.49
NPC1L1-201ENST00000289547 KRT10P13645 584 aa12□□□□□ -0.49
NPC1L1-201ENST00000289547 CENPUQ71F23 418 aa12□□□□□ -0.49
NPC1L1-201ENST00000289547 WDR75Q8IWA0 830 aaKnown RBP12□□□□□ -0.49
NPC1L1-201ENST00000289547 CDKL2Q92772 493 aa12□□□□□ -0.49
NPC1L1-201ENST00000289547 PALMDQ9NP74 551 aa12□□□□□ -0.49
NPC1L1-201ENST00000289547 PRMT7Q9NVM4 692 aaPredicted RBP12□□□□□ -0.49
NPC1L1-201ENST00000289547 AFDNP55196 1824 aaKnown RBP12□□□□□ -0.49
NPC1L1-201ENST00000289547 SPDYE16A6NNV3 312 aaPredicted RBP12□□□□□ -0.49
NPC1L1-201ENST00000289547 MIF4GDA9UHW6 222 aaKnown RBP12□□□□□ -0.49
NPC1L1-201ENST00000289547 TTI1O43156 1089 aa12□□□□□ -0.49
NPC1L1-201ENST00000289547 NQO1P15559 274 aaKnown RBP12□□□□□ -0.49
NPC1L1-201ENST00000289547 ZFXP17010 805 aaPredicted RBP12□□□□□ -0.49
NPC1L1-201ENST00000289547 BASP1P80723 227 aaKnown RBP12□□□□□ -0.49
NPC1L1-201ENST00000289547 ZNF667Q5HYK9 610 aa12□□□□□ -0.49
NPC1L1-201ENST00000289547 SFR1Q86XK3 245 aa12□□□□□ -0.49
NPC1L1-201ENST00000289547 ACAP3Q96P50 834 aa12□□□□□ -0.49
NPC1L1-201ENST00000289547 AGPAT5Q9NUQ2 364 aa12□□□□□ -0.49
NPC1L1-201ENST00000289547 MROH7Q68CQ1 1323 aa12□□□□□ -0.49
NPC1L1-201ENST00000289547 AP1G2O75843 785 aa12□□□□□ -0.49
NPC1L1-201ENST00000289547 MUTP22033 750 aa12□□□□□ -0.49
NPC1L1-201ENST00000289547 MXI1P50539 228 aa12□□□□□ -0.49
NPC1L1-201ENST00000289547 PGM5Q15124 567 aa12□□□□□ -0.49
NPC1L1-201ENST00000289547 FSCN1Q16658 493 aaKnown RBP12□□□□□ -0.49
NPC1L1-201ENST00000289547 NUDCD3Q8IVD9 361 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms