RNA–Protein interactions for RNA: YPR052C

NHP6A, Transcript of High-mobility group (HMG) protein, yeast

Gene NHP6A, Length 282 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NHP6A	YPR052C	YHC3	P47040	408 aa		4.17	□□□□□ -1.74
NHP6A	YPR052C	SKP1	P52286	194 aa		4.17	□□□□□ -1.74
NHP6A	YPR052C	UFD1	P53044	361 aa		4.17	□□□□□ -1.74
NHP6A	YPR052C	TNA1	P53322	534 aa		4.17	□□□□□ -1.74
NHP6A	YPR052C	YNR048W	P53740	393 aa		4.17	□□□□□ -1.74
NHP6A	YPR052C	MRPL19	P53875	158 aa		4.17	□□□□□ -1.74
NHP6A	YPR052C	RTT103	Q05543	409 aa		4.17	□□□□□ -1.74
NHP6A	YPR052C	MRX9	Q07349	420 aa	Known RBP	4.17	□□□□□ -1.74
NHP6A	YPR052C	GRC3	Q07845	632 aa		4.17	□□□□□ -1.74
NHP6A	YPR052C	TMC1	Q08422	150 aa	Predicted RBP	4.17	□□□□□ -1.74
NHP6A	YPR052C	THI72	Q08579	599 aa		4.17	□□□□□ -1.74
NHP6A	YPR052C	SCP1	Q08873	200 aa		4.17	□□□□□ -1.74
NHP6A	YPR052C	EAF3	Q12432	401 aa		4.17	□□□□□ -1.74
NHP6A	YPR052C	HUT1	Q12520	339 aa		4.17	□□□□□ -1.74
NHP6A	YPR052C	BLM10	P43583	2143 aa		4.16	□□□□□ -1.74
NHP6A	YPR052C	YLL053C	P0CD98	152 aa		4.16	□□□□□ -1.74
NHP6A	YPR052C	MIR1	P23641	311 aa	Known RBP	4.16	□□□□□ -1.74
NHP6A	YPR052C	YKL187C	P34231	750 aa		4.16	□□□□□ -1.74
NHP6A	YPR052C	YBR220C	P38318	560 aa		4.16	□□□□□ -1.74
NHP6A	YPR052C	COS8	P38723	381 aa		4.16	□□□□□ -1.74
NHP6A	YPR052C	YIR035C	P40579	254 aa		4.16	□□□□□ -1.74
NHP6A	YPR052C	MID1	P41821	548 aa		4.16	□□□□□ -1.74
NHP6A	YPR052C	GNA1	P43577	159 aa	Predicted RBP	4.16	□□□□□ -1.74
NHP6A	YPR052C	GWT1	P47026	490 aa		4.16	□□□□□ -1.74
NHP6A	YPR052C	YJR011C	P47086	261 aa	Predicted RBP	4.16	□□□□□ -1.74
NHP6A	YPR052C	ABM1	P47146	123 aa		4.16	□□□□□ -1.74
NHP6A	YPR052C	ALG9	P53868	555 aa	Known RBP	4.16	□□□□□ -1.74
NHP6A	YPR052C	TIM44	Q01852	431 aa		4.16	□□□□□ -1.74
NHP6A	YPR052C	YAP6	Q03935	383 aa		4.16	□□□□□ -1.74
NHP6A	YPR052C	CAB5	Q03941	241 aa		4.16	□□□□□ -1.74
NHP6A	YPR052C	IZH2	Q12442	317 aa		4.16	□□□□□ -1.74
NHP6A	YPR052C	UBA3	Q99344	299 aa		4.16	□□□□□ -1.74
NHP6A	YPR052C	QCR2	P07257	368 aa		4.15	□□□□□ -1.75
NHP6A	YPR052C	RPL35A	P0CX84	120 aa	Known RBP	4.15	□□□□□ -1.75
NHP6A	YPR052C	RPL35B	P0CX85	120 aa	Known RBP	4.15	□□□□□ -1.75
NHP6A	YPR052C	ARO3	P14843	370 aa	Known RBP	4.15	□□□□□ -1.75
NHP6A	YPR052C	FUS3	P16892	353 aa	Known RBP	4.15	□□□□□ -1.75
NHP6A	YPR052C	RPB9	P27999	122 aa		4.15	□□□□□ -1.75
NHP6A	YPR052C	PEX4	P29340	183 aa		4.15	□□□□□ -1.75
NHP6A	YPR052C	PDC2	P32896	925 aa		4.15	□□□□□ -1.75
NHP6A	YPR052C	FAT1	P38225	669 aa		4.15	□□□□□ -1.75
NHP6A	YPR052C	YBR197C	P38306	217 aa		4.15	□□□□□ -1.75
NHP6A	YPR052C	SOH1	P38633	127 aa		4.15	□□□□□ -1.75
NHP6A	YPR052C	GCV3	P39726	170 aa	Predicted RBP	4.15	□□□□□ -1.75
NHP6A	YPR052C	SSO2	P39926	295 aa		4.15	□□□□□ -1.75
NHP6A	YPR052C	YIL012W	P40551	113 aa		4.15	□□□□□ -1.75
NHP6A	YPR052C	GLR1	P41921	483 aa	Known RBP	4.15	□□□□□ -1.75
NHP6A	YPR052C	PNC1	P53184	216 aa	Known RBP	4.15	□□□□□ -1.75
NHP6A	YPR052C	ELA1	P53861	379 aa	Predicted RBP	4.15	□□□□□ -1.75
NHP6A	YPR052C	THI74	Q04083	370 aa		4.15	□□□□□ -1.75
NHP6A	YPR052C	API2	Q04413	109 aa		4.15	□□□□□ -1.75
NHP6A	YPR052C	NOC4	Q06512	552 aa	Predicted RBP	4.15	□□□□□ -1.75
NHP6A	YPR052C	RRT7	Q07829	113 aa		4.15	□□□□□ -1.75
NHP6A	YPR052C	USB1	Q12208	290 aa	Known RBP	4.15	□□□□□ -1.75
NHP6A	YPR052C	VAM3	Q12241	283 aa		4.15	□□□□□ -1.75
NHP6A	YPR052C	YLR108C	Q12259	485 aa		4.15	□□□□□ -1.75
NHP6A	YPR052C	REP2	P03872	296 aa		4.14	□□□□□ -1.75
NHP6A	YPR052C	GAL1	P04385	528 aa		4.14	□□□□□ -1.75
NHP6A	YPR052C	RPP1A	P05318	106 aa	Predicted RBP	4.14	□□□□□ -1.75
NHP6A	YPR052C	DEG1	P31115	442 aa	Known RBP	4.14	□□□□□ -1.75
NHP6A	YPR052C	OCH1	P31755	480 aa		4.14	□□□□□ -1.75
NHP6A	YPR052C	GLC7	P32598	312 aa	Known RBP	4.14	□□□□□ -1.75
NHP6A	YPR052C	REC114	P32841	428 aa		4.14	□□□□□ -1.75
NHP6A	YPR052C	SPC29	P33419	253 aa		4.14	□□□□□ -1.75
NHP6A	YPR052C	LSM12	P38828	187 aa	Known RBP	4.14	□□□□□ -1.75
NHP6A	YPR052C	ASP1	P38986	381 aa	Predicted RBP	4.14	□□□□□ -1.75
NHP6A	YPR052C	YFL051C	P43552	160 aa		4.14	□□□□□ -1.75
NHP6A	YPR052C	SSN8	P47821	323 aa		4.14	□□□□□ -1.75
NHP6A	YPR052C	SBH2	P52871	88 aa		4.14	□□□□□ -1.75
NHP6A	YPR052C	YGL117W	P53133	265 aa		4.14	□□□□□ -1.75
NHP6A	YPR052C	EST3	Q03096	181 aa		4.14	□□□□□ -1.75
NHP6A	YPR052C	HAS1	Q03532	505 aa	Known RBP	4.14	□□□□□ -1.75
NHP6A	YPR052C	YML108W	Q03759	105 aa		4.14	□□□□□ -1.75
NHP6A	YPR052C	YDL086W	Q07505	273 aa		4.14	□□□□□ -1.75
NHP6A	YPR052C	RFU1	Q08003	200 aa		4.14	□□□□□ -1.75
NHP6A	YPR052C	YOR186W	Q08560	144 aa		4.14	□□□□□ -1.75
NHP6A	YPR052C	YCT1	Q12235	531 aa		4.14	□□□□□ -1.75
NHP6A	YPR052C	MED4	Q12343	284 aa		4.14	□□□□□ -1.75
NHP6A	YPR052C	MSI1	P13712	422 aa		4.13	□□□□□ -1.75
NHP6A	YPR052C	SAG1	P20840	650 aa		4.13	□□□□□ -1.75
NHP6A	YPR052C	OLE1	P21147	510 aa	Known RBP	4.13	□□□□□ -1.75
NHP6A	YPR052C	RPD3	P32561	433 aa		4.13	□□□□□ -1.75
NHP6A	YPR052C	YKL102C	P34249	101 aa		4.13	□□□□□ -1.75
NHP6A	YPR052C	MCH2	P36032	473 aa		4.13	□□□□□ -1.75
NHP6A	YPR052C	SWD2	P36104	329 aa	Predicted RBP	4.13	□□□□□ -1.75
NHP6A	YPR052C	ARC40	P38328	384 aa	Known RBP	4.13	□□□□□ -1.75
NHP6A	YPR052C	YER079W	P40052	210 aa	Known RBP	4.13	□□□□□ -1.75
NHP6A	YPR052C	OST1	P41543	476 aa	Known RBP	4.13	□□□□□ -1.75
NHP6A	YPR052C	PHO23	P50947	330 aa		4.13	□□□□□ -1.75
NHP6A	YPR052C	ACT1	P60010	375 aa	Known RBP	4.13	□□□□□ -1.75
NHP6A	YPR052C	VPS28	Q02767	242 aa		4.13	□□□□□ -1.75
NHP6A	YPR052C	RCE1	Q03530	315 aa		4.13	□□□□□ -1.75
NHP6A	YPR052C	YDR391C	Q04170	232 aa		4.13	□□□□□ -1.75
NHP6A	YPR052C	BER1	Q06688	274 aa	Known RBP	4.13	□□□□□ -1.75
NHP6A	YPR052C	YLR146W-A	Q2V2P1	62 aa		4.13	□□□□□ -1.75
NHP6A	YPR052C	RPL25	P04456	142 aa	Known RBP	4.12	□□□□□ -1.75
NHP6A	YPR052C	CKA1	P15790	372 aa		4.12	□□□□□ -1.75
NHP6A	YPR052C	MRS4	P23500	304 aa		4.12	□□□□□ -1.75
NHP6A	YPR052C	VMA3	P25515	160 aa		4.12	□□□□□ -1.75
NHP6A	YPR052C	YCR101C	P25607	182 aa		4.12	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 25.2 ms