RNA–Protein interactions for RNA: YPL261C

YPL261C, Transcript of Dubious open reading frame, yeast

Gene YPL261C, Length 309 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPL261C	YPL261C	LDB7	P38210	180 aa		0.57	□□□□□ -2.32
YPL261C	YPL261C	TIR3	P40552	269 aa		0.57	□□□□□ -2.32
YPL261C	YPL261C	RPA43	P46669	326 aa		0.57	□□□□□ -2.32
YPL261C	YPL261C	HOC1	P47124	396 aa		0.57	□□□□□ -2.32
YPL261C	YPL261C	YMD8	Q03697	442 aa		0.57	□□□□□ -2.32
YPL261C	YPL261C	YLR173W	Q06247	608 aa		0.57	□□□□□ -2.32
YPL261C	YPL261C	CSM4	Q08955	156 aa		0.57	□□□□□ -2.32
YPL261C	YPL261C	USB1	Q12208	290 aa	Known RBP	0.57	□□□□□ -2.32
YPL261C	YPL261C	ATG31	Q12421	196 aa		0.57	□□□□□ -2.32
YPL261C	YPL261C	YGL010W	P25338	174 aa		0.56	□□□□□ -2.32
YPL261C	YPL261C	CUE1	P38428	203 aa		0.56	□□□□□ -2.32
YPL261C	YPL261C	YJR056C	P47115	236 aa		0.56	□□□□□ -2.32
YPL261C	YPL261C	HAM1	P47119	197 aa	Known RBP	0.56	□□□□□ -2.32
YPL261C	YPL261C	EAF6	P47128	113 aa		0.56	□□□□□ -2.32
YPL261C	YPL261C	NSA1	P53136	463 aa	Predicted RBP	0.56	□□□□□ -2.32
YPL261C	YPL261C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	0.56	□□□□□ -2.32	not detected
YPL261C	YPL261C	DRS2	P39524	1355 aa		0.56	□□□□□ -2.32
YPL261C	YPL261C	RPL2A	P0CX45	254 aa	Known RBP	0.55	□□□□□ -2.32
YPL261C	YPL261C	RPL2B	P0CX46	254 aa	Known RBP	0.55	□□□□□ -2.32
YPL261C	YPL261C	CDC10	P25342	322 aa	Known RBP	0.55	□□□□□ -2.32
YPL261C	YPL261C	YCR016W	P25617	290 aa	Known RBP	0.55	□□□□□ -2.32
YPL261C	YPL261C	SRB4	P32569	687 aa		0.55	□□□□□ -2.32
YPL261C	YPL261C	URA8	P38627	578 aa	Predicted RBP	0.55	□□□□□ -2.32
YPL261C	YPL261C	AVT2	P39981	480 aa		0.55	□□□□□ -2.32
YPL261C	YPL261C	YER135C	P40082	130 aa		0.55	□□□□□ -2.32
YPL261C	YPL261C	PGD1	P40356	397 aa		0.55	□□□□□ -2.32
YPL261C	YPL261C	AIF1	P52923	378 aa		0.55	□□□□□ -2.32
YPL261C	YPL261C	TOS8	P53147	276 aa		0.55	□□□□□ -2.32
YPL261C	YPL261C	SNZ1	Q03148	297 aa		0.55	□□□□□ -2.32
YPL261C	YPL261C	TRM12	Q04235	462 aa		0.55	□□□□□ -2.32
YPL261C	YPL261C	YLR162W	Q06235	118 aa		0.55	□□□□□ -2.32
YPL261C	YPL261C	CYR1	P08678	2026 aa	Known RBP	0.55	□□□□□ -2.32
YPL261C	YPL261C	MET5	P47169	1442 aa		0.55	□□□□□ -2.32
YPL261C	YPL261C	MATALPHA1	P0CY06	175 aa		0.54	□□□□□ -2.32
YPL261C	YPL261C	HMLALPHA1	P0CY07	175 aa		0.54	□□□□□ -2.32
YPL261C	YPL261C	MRPS28	P21771	286 aa		0.54	□□□□□ -2.32
YPL261C	YPL261C	MRPL25	P23369	157 aa		0.54	□□□□□ -2.32
YPL261C	YPL261C	ATG22	P25568	528 aa		0.54	□□□□□ -2.32
YPL261C	YPL261C	FZF1	P32805	299 aa		0.54	□□□□□ -2.32
YPL261C	YPL261C	YKL075C	P36083	450 aa		0.54	□□□□□ -2.32
YPL261C	YPL261C	YBR220C	P38318	560 aa		0.54	□□□□□ -2.32
YPL261C	YPL261C	YNL217W	P40152	326 aa		0.54	□□□□□ -2.32
YPL261C	YPL261C	PEX17	P40155	199 aa		0.54	□□□□□ -2.32
YPL261C	YPL261C	YRB2	P40517	327 aa		0.54	□□□□□ -2.32
YPL261C	YPL261C	YNR077C	P53758	84 aa		0.54	□□□□□ -2.32
YPL261C	YPL261C	ABF2	Q02486	183 aa		0.54	□□□□□ -2.32
YPL261C	YPL261C	GAS3	Q03655	524 aa		0.54	□□□□□ -2.32
YPL261C	YPL261C	TPO4	Q12256	659 aa		0.54	□□□□□ -2.32
YPL261C	YPL261C	MED4	Q12343	284 aa		0.54	□□□□□ -2.32
YPL261C	YPL261C	TUS1	Q06412	1307 aa		0.54	□□□□□ -2.32
YPL261C	YPL261C	RPL27B	P0C2H7	136 aa	Known RBP	0.53	□□□□□ -2.32
YPL261C	YPL261C	YLR156W	P0CE96	114 aa		0.53	□□□□□ -2.32
YPL261C	YPL261C	YLR159W	P0CE97	114 aa		0.53	□□□□□ -2.32
YPL261C	YPL261C	YLR161W	P0CE98	114 aa		0.53	□□□□□ -2.32
YPL261C	YPL261C	MSN4	P33749	630 aa		0.53	□□□□□ -2.32
YPL261C	YPL261C	DOG2	P38773	246 aa		0.53	□□□□□ -2.32
YPL261C	YPL261C	RPL13B	P40212	199 aa	Known RBP	0.53	□□□□□ -2.32
YPL261C	YPL261C	BOL2	P53082	120 aa		0.53	□□□□□ -2.32
YPL261C	YPL261C	PET117	Q02771	107 aa		0.53	□□□□□ -2.32
YPL261C	YPL261C	LPP1	Q04396	274 aa		0.53	□□□□□ -2.32
YPL261C	YPL261C	PSF1	Q12488	208 aa		0.53	□□□□□ -2.32
YPL261C	YPL261C	RPL13A	Q12690	199 aa	Predicted RBP	0.53	□□□□□ -2.32
YPL261C	YPL261C	TDA8	Q6B2U8	126 aa		0.53	□□□□□ -2.32
YPL261C	YPL261C	CDC28	P00546	298 aa	Known RBP	0.52	□□□□□ -2.33
YPL261C	YPL261C	GPA2	P10823	449 aa		0.52	□□□□□ -2.33
YPL261C	YPL261C	NTF2	P33331	125 aa	Known RBP	0.52	□□□□□ -2.33
YPL261C	YPL261C	YET1	P35723	206 aa		0.52	□□□□□ -2.33
YPL261C	YPL261C	MIC12	P38341	106 aa		0.52	□□□□□ -2.33
YPL261C	YPL261C	IRC22	P40006	225 aa		0.52	□□□□□ -2.33
YPL261C	YPL261C	ICE2	P40499	491 aa		0.52	□□□□□ -2.33
YPL261C	YPL261C	YJR149W	P47177	404 aa		0.52	□□□□□ -2.33
YPL261C	YPL261C	ALG13	P53178	202 aa		0.52	□□□□□ -2.33
YPL261C	YPL261C	SAY1	P53324	424 aa		0.52	□□□□□ -2.33
YPL261C	YPL261C	RRN5	Q02983	363 aa		0.52	□□□□□ -2.33
YPL261C	YPL261C	KRE28	Q04431	385 aa		0.52	□□□□□ -2.33
YPL261C	YPL261C	CPA1	P07258	411 aa	Known RBP	0.51	□□□□□ -2.33
YPL261C	YPL261C	URA6	P15700	204 aa		0.51	□□□□□ -2.33
YPL261C	YPL261C	DBF2	P22204	572 aa		0.51	□□□□□ -2.33
YPL261C	YPL261C	MEI4	P29467	408 aa		0.51	□□□□□ -2.33
YPL261C	YPL261C	SKG1	P36169	355 aa		0.51	□□□□□ -2.33
YPL261C	YPL261C	MRPL28	P36527	147 aa		0.51	□□□□□ -2.33
YPL261C	YPL261C	SVP26	P38869	228 aa		0.51	□□□□□ -2.33
YPL261C	YPL261C	GAA1	P39012	614 aa		0.51	□□□□□ -2.33
YPL261C	YPL261C	PRE6	P40303	254 aa	Known RBP	0.51	□□□□□ -2.33
YPL261C	YPL261C	FMC1	P40491	155 aa		0.51	□□□□□ -2.33
YPL261C	YPL261C	MCM22	P47167	239 aa		0.51	□□□□□ -2.33
YPL261C	YPL261C	INO80	P53115	1489 aa		0.51	□□□□□ -2.33
YPL261C	YPL261C	PDR18	P53756	1333 aa		0.51	□□□□□ -2.33
YPL261C	YPL261C	YNL010W	P53981	241 aa	Known RBP	0.51	□□□□□ -2.33
YPL261C	YPL261C	TIM9	O74700	87 aa		0.5	□□□□□ -2.33
YPL261C	YPL261C	RPL28	P02406	149 aa	Known RBP	0.5	□□□□□ -2.33
YPL261C	YPL261C	REP2	P03872	296 aa		0.5	□□□□□ -2.33
YPL261C	YPL261C	SIR2	P06700	562 aa		0.5	□□□□□ -2.33
YPL261C	YPL261C	RHO1	P06780	209 aa	Known RBP	0.5	□□□□□ -2.33
YPL261C	YPL261C	BCY1	P07278	416 aa	Known RBP	0.5	□□□□□ -2.33
YPL261C	YPL261C	SRY1	P36007	326 aa		0.5	□□□□□ -2.33
YPL261C	YPL261C	VPS21	P36017	210 aa	Known RBP	0.5	□□□□□ -2.33
YPL261C	YPL261C	LIA1	P47120	325 aa	Known RBP	0.5	□□□□□ -2.33
YPL261C	YPL261C	NUP84	P52891	726 aa		0.5	□□□□□ -2.33
YPL261C	YPL261C	FYV6	P53913	173 aa		0.5	□□□□□ -2.33

Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms