RNA–Protein interactions for RNA: YOR332W

VMA4, Transcript of Subunit E of the V1 domain of the vacuolar H+-ATPase (V-ATPase), yeast

Gene VMA4, Length 702 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA4	YOR332W	ASK10	P48361	1146 aa		5.22	□□□□□ -1.57
VMA4	YOR332W	OCA1	P50946	238 aa	Predicted RBP	5.22	□□□□□ -1.57
VMA4	YOR332W	PKP2	P53170	491 aa		5.22	□□□□□ -1.57
VMA4	YOR332W	RHO5	P53879	331 aa	Known RBP	5.22	□□□□□ -1.57
VMA4	YOR332W	SAM50	P53969	484 aa		5.22	□□□□□ -1.57
VMA4	YOR332W	YPL108W	Q02872	168 aa	Predicted RBP	5.22	□□□□□ -1.57
VMA4	YOR332W	MRPS17	Q03246	237 aa	Predicted RBP	5.22	□□□□□ -1.57
VMA4	YOR332W	TMA23	Q03525	211 aa		5.22	□□□□□ -1.57
VMA4	YOR332W	THI74	Q04083	370 aa		5.22	□□□□□ -1.57
VMA4	YOR332W	BNA5	Q05979	453 aa		5.22	□□□□□ -1.57
VMA4	YOR332W	SRL2	Q12020	392 aa		5.22	□□□□□ -1.57
VMA4	YOR332W	YLR118C	Q12354	227 aa		5.22	□□□□□ -1.57
VMA4	YOR332W	YDR034W-B	Q6Q5X2	51 aa		5.22	□□□□□ -1.57
VMA4	YOR332W	YBR182C-A	Q8TGU6	64 aa		5.22	□□□□□ -1.57
VMA4	YOR332W	MXR2	P25566	168 aa		5.21	□□□□□ -1.58
VMA4	YOR332W	FRM2	P37261	193 aa		5.21	□□□□□ -1.58
VMA4	YOR332W	YPT31	P38555	223 aa	Known RBP	5.21	□□□□□ -1.58
VMA4	YOR332W	WSC4	P38739	605 aa		5.21	□□□□□ -1.58
VMA4	YOR332W	PFS1	P38872	237 aa		5.21	□□□□□ -1.58
VMA4	YOR332W	YIL152W	P40455	235 aa		5.21	□□□□□ -1.58
VMA4	YOR332W	XBP1	P40489	647 aa		5.21	□□□□□ -1.58
VMA4	YOR332W	GPP1	P41277	250 aa	Known RBP	5.21	□□□□□ -1.58
VMA4	YOR332W	NIT2	P47016	307 aa		5.21	□□□□□ -1.58
VMA4	YOR332W	BRR6	P53062	197 aa		5.21	□□□□□ -1.58
VMA4	YOR332W	YIF1	P53845	314 aa	Known RBP	5.21	□□□□□ -1.58
VMA4	YOR332W	OCA2	P53949	197 aa		5.21	□□□□□ -1.58
VMA4	YOR332W	ADD37	Q03233	198 aa		5.21	□□□□□ -1.58
VMA4	YOR332W	YDR415C	Q04033	374 aa	Predicted RBP	5.21	□□□□□ -1.58
VMA4	YOR332W	PAL1	Q05518	499 aa	Known RBP	5.21	□□□□□ -1.58
VMA4	YOR332W	MCH4	Q08268	501 aa		5.21	□□□□□ -1.58
VMA4	YOR332W	SEC59	P20048	519 aa		5.2	□□□□□ -1.58
VMA4	YOR332W	MRS4	P23500	304 aa		5.2	□□□□□ -1.58
VMA4	YOR332W	RFA3	P26755	122 aa	Known RBP	5.2	□□□□□ -1.58
VMA4	YOR332W	RPS27A	P35997	82 aa	Known RBP	5.2	□□□□□ -1.58
VMA4	YOR332W	RIB5	P38145	238 aa		5.2	□□□□□ -1.58
VMA4	YOR332W	PRS2	P38620	318 aa	Known RBP	5.2	□□□□□ -1.58
VMA4	YOR332W	RPS27B	P38711	82 aa		5.2	□□□□□ -1.58
VMA4	YOR332W	GET2	P40056	285 aa		5.2	□□□□□ -1.58
VMA4	YOR332W	SLM1	P40485	686 aa		5.2	□□□□□ -1.58
VMA4	YOR332W	BNS1	P50084	137 aa		5.2	□□□□□ -1.58
VMA4	YOR332W	SEH1	P53011	349 aa	Known RBP	5.2	□□□□□ -1.58
VMA4	YOR332W	YGL185C	P53100	379 aa		5.2	□□□□□ -1.58
VMA4	YOR332W	ERV14	P53173	138 aa		5.2	□□□□□ -1.58
VMA4	YOR332W	PEF1	P53238	335 aa		5.2	□□□□□ -1.58
VMA4	YOR332W	RNH201	P53942	307 aa		5.2	□□□□□ -1.58
VMA4	YOR332W	ACS1	Q01574	713 aa		5.2	□□□□□ -1.58
VMA4	YOR332W	SKO1	Q02100	647 aa		5.2	□□□□□ -1.58
VMA4	YOR332W	YVH1	Q02256	364 aa	Known RBP	5.2	□□□□□ -1.58
VMA4	YOR332W	VPS28	Q02767	242 aa		5.2	□□□□□ -1.58
VMA4	YOR332W	RSM10	Q03201	203 aa		5.2	□□□□□ -1.58
VMA4	YOR332W	CTR3	Q06686	241 aa		5.2	□□□□□ -1.58
VMA4	YOR332W	PML1	Q07930	204 aa	Predicted RBP	5.2	□□□□□ -1.58
VMA4	YOR332W	MIM1	Q08176	113 aa		5.2	□□□□□ -1.58
VMA4	YOR332W	YOR352W	Q08816	343 aa		5.2	□□□□□ -1.58
VMA4	YOR332W	TGS1	Q12052	315 aa		5.2	□□□□□ -1.58
VMA4	YOR332W	DAP1	Q12091	152 aa		5.2	□□□□□ -1.58
VMA4	YOR332W	ERP4	Q12450	207 aa		5.2	□□□□□ -1.58
VMA4	YOR332W	UBA3	Q99344	299 aa		5.2	□□□□□ -1.58
VMA4	YOR332W	CCH1	P50077	2039 aa		5.19	□□□□□ -1.58
VMA4	YOR332W	YSF3	P0C074	85 aa	Predicted RBP	5.19	□□□□□ -1.58
VMA4	YOR332W	AIM17	P23180	465 aa	Known RBP	5.19	□□□□□ -1.58
VMA4	YOR332W	SCO1	P23833	295 aa		5.19	□□□□□ -1.58
VMA4	YOR332W	POP5	P28005	173 aa		5.19	□□□□□ -1.58
VMA4	YOR332W	LAC1	P28496	418 aa		5.19	□□□□□ -1.58
VMA4	YOR332W	SSS1	P35179	80 aa		5.19	□□□□□ -1.58
VMA4	YOR332W	YNK1	P36010	153 aa	Known RBP	5.19	□□□□□ -1.58
VMA4	YOR332W	FAT1	P38225	669 aa		5.19	□□□□□ -1.58
VMA4	YOR332W	ELO1	P39540	310 aa		5.19	□□□□□ -1.58
VMA4	YOR332W	IKS1	P47042	667 aa		5.19	□□□□□ -1.58
VMA4	YOR332W	PUS4	P48567	403 aa	Known RBP	5.19	□□□□□ -1.58
VMA4	YOR332W	AVT4	P50944	713 aa		5.19	□□□□□ -1.58
VMA4	YOR332W	MEH1	Q02205	184 aa		5.19	□□□□□ -1.58
VMA4	YOR332W	YMR082C	Q04276	118 aa		5.19	□□□□□ -1.58
VMA4	YOR332W	NNT1	Q05874	261 aa		5.19	□□□□□ -1.58
VMA4	YOR332W	YPR147C	Q06522	304 aa	Known RBP	5.19	□□□□□ -1.58
VMA4	YOR332W	SCEI	P03882	235 aa		5.18	□□□□□ -1.58
VMA4	YOR332W	SCM4	P32564	187 aa		5.18	□□□□□ -1.58
VMA4	YOR332W	EMP70	P32802	667 aa		5.18	□□□□□ -1.58
VMA4	YOR332W	YBR292C	P38357	123 aa		5.18	□□□□□ -1.58
VMA4	YOR332W	LSM4	P40070	187 aa	Known RBP	5.18	□□□□□ -1.58
VMA4	YOR332W	TIF34	P40217	347 aa	Known RBP	5.18	□□□□□ -1.58
VMA4	YOR332W	FLX1	P40464	311 aa		5.18	□□□□□ -1.58
VMA4	YOR332W	YIL077C	P40508	320 aa		5.18	□□□□□ -1.58
VMA4	YOR332W	PHS1	P40857	217 aa		5.18	□□□□□ -1.58
VMA4	YOR332W	GWT1	P47026	490 aa		5.18	□□□□□ -1.58
VMA4	YOR332W	YJR141W	P47172	347 aa	Predicted RBP	5.18	□□□□□ -1.58
VMA4	YOR332W	MGA1	P53050	456 aa		5.18	□□□□□ -1.58
VMA4	YOR332W	BSC5	P53755	489 aa		5.18	□□□□□ -1.58
VMA4	YOR332W	TEX1	P53851	422 aa	Known RBP	5.18	□□□□□ -1.58
VMA4	YOR332W	YLR460C	P54007	376 aa		5.18	□□□□□ -1.58
VMA4	YOR332W	GMC1	Q04399	608 aa		5.18	□□□□□ -1.58
VMA4	YOR332W	YLR456W	Q06199	204 aa		5.18	□□□□□ -1.58
VMA4	YOR332W	IRC19	Q07843	230 aa		5.18	□□□□□ -1.58
VMA4	YOR332W	YOR015W	Q12169	119 aa		5.18	□□□□□ -1.58
VMA4	YOR332W	MED4	Q12343	284 aa		5.18	□□□□□ -1.58
VMA4	YOR332W	DCN1	Q12395	269 aa		5.18	□□□□□ -1.58
VMA4	YOR332W	HMS1	Q12398	434 aa		5.18	□□□□□ -1.58
VMA4	YOR332W	OLE1	P21147	510 aa	Known RBP	5.17	□□□□□ -1.58
VMA4	YOR332W	KRR1	P25586	316 aa	Predicted RBP	5.17	□□□□□ -1.58
VMA4	YOR332W	FAA1	P30624	700 aa	Known RBP	5.17	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 26 ms