RNA–Protein interactions for RNA: YOR261C

RPN8, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN8, Length 1,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN8YOR261C PET9P18239 318 aaKnown RBP2□□□□□ -2.09
RPN8YOR261C MRPL25P23369 157 aa2□□□□□ -2.09
RPN8YOR261C LDB7P38210 180 aa2□□□□□ -2.09
RPN8YOR261C VTC1P40046 129 aaRIP-Chip data2□□□□□ -2.09not detected
RPN8YOR261C PEX17P40155 199 aa2□□□□□ -2.09
RPN8YOR261C NUP84P52891 726 aa2□□□□□ -2.09
RPN8YOR261C CDC8P00572 216 aa1.99□□□□□ -2.09
RPN8YOR261C YOL162WP0CF19 215 aa1.99□□□□□ -2.09
RPN8YOR261C NTF2P33331 125 aaKnown RBP1.99□□□□□ -2.09
RPN8YOR261C AVT2P39981 480 aa1.99□□□□□ -2.09
RPN8YOR261C AGE2P40529 298 aa1.99□□□□□ -2.09
RPN8YOR261C ERV29P53337 310 aa1.99□□□□□ -2.09
RPN8YOR261C BUD25P85052 153 aa1.99□□□□□ -2.09
RPN8YOR261C RRN5Q02983 363 aa1.99□□□□□ -2.09
RPN8YOR261C SSQ1Q05931 657 aaPredicted RBP1.99□□□□□ -2.09
RPN8YOR261C PSF1Q12488 208 aa1.99□□□□□ -2.09
RPN8YOR261C MEI4P29467 408 aa1.98□□□□□ -2.09
RPN8YOR261C SRB4P32569 687 aa1.98□□□□□ -2.09
RPN8YOR261C CUE1P38428 203 aa1.98□□□□□ -2.09
RPN8YOR261C TRM9P49957 279 aa1.98□□□□□ -2.09
RPN8YOR261C YNL010WP53981 241 aaKnown RBP1.98□□□□□ -2.09
RPN8YOR261C DID2P69771 204 aa1.98□□□□□ -2.09
RPN8YOR261C YLR283WQ05867 314 aa1.98□□□□□ -2.09
RPN8YOR261C BCY1P07278 416 aaKnown RBP1.97□□□□□ -2.09
RPN8YOR261C VPS21P36017 210 aaKnown RBP1.97□□□□□ -2.09
RPN8YOR261C YBR219CP38317 127 aa1.97□□□□□ -2.09
RPN8YOR261C TRM12Q04235 462 aa1.97□□□□□ -2.09
RPN8YOR261C YKR045CP36138 183 aa1.96□□□□□ -2.1
RPN8YOR261C IRC22P40006 225 aa1.96□□□□□ -2.1
RPN8YOR261C GLE2P40066 365 aa1.96□□□□□ -2.1
RPN8YOR261C PET117Q02771 107 aa1.96□□□□□ -2.1
RPN8YOR261C SML1Q04964 104 aa1.96□□□□□ -2.1
RPN8YOR261C SPT3P06844 337 aa1.95□□□□□ -2.1
RPN8YOR261C YGL010WP25338 174 aa1.95□□□□□ -2.1
RPN8YOR261C CDC10P25342 322 aaKnown RBP1.95□□□□□ -2.1
RPN8YOR261C ICE2P40499 491 aa1.95□□□□□ -2.1
RPN8YOR261C TIR3P40552 269 aa1.95□□□□□ -2.1
RPN8YOR261C RPL33BP41056 107 aaKnown RBP1.95□□□□□ -2.1
RPN8YOR261C RPC17P47076 161 aa1.95□□□□□ -2.1
RPN8YOR261C SPG3Q04398 127 aaPredicted RBP1.95□□□□□ -2.1
RPN8YOR261C CSI2Q08054 341 aa1.95□□□□□ -2.1
RPN8YOR261C MATALPHA1P0CY06 175 aa1.94□□□□□ -2.1
RPN8YOR261C HMLALPHA1P0CY07 175 aa1.94□□□□□ -2.1
RPN8YOR261C YCR016WP25617 290 aaKnown RBP1.94□□□□□ -2.1
RPN8YOR261C YBR220CP38318 560 aa1.94□□□□□ -2.1
RPN8YOR261C REP2P03872 296 aa1.93□□□□□ -2.1
RPN8YOR261C YPR170W-BP0C5R9 85 aa1.93□□□□□ -2.1
RPN8YOR261C URA8P38627 578 aaPredicted RBP1.93□□□□□ -2.1
RPN8YOR261C BOL2P53082 120 aa1.93□□□□□ -2.1
RPN8YOR261C YML108WQ03759 105 aa1.93□□□□□ -2.1
RPN8YOR261C YLR162WQ06235 118 aa1.93□□□□□ -2.1
RPN8YOR261C SRY1P36007 326 aa1.92□□□□□ -2.1
RPN8YOR261C PGD1P40356 397 aa1.92□□□□□ -2.1
RPN8YOR261C NSA1P53136 463 aaPredicted RBP1.92□□□□□ -2.1
RPN8YOR261C YMD8Q03697 442 aa1.92□□□□□ -2.1
RPN8YOR261C LSO2Q3E772 92 aaKnown RBP1.92□□□□□ -2.1
RPN8YOR261C CYR1P08678 2026 aaKnown RBP1.91□□□□□ -2.1
RPN8YOR261C RPL27BP0C2H7 136 aaKnown RBP1.91□□□□□ -2.1
RPN8YOR261C DOG2P38773 246 aa1.91□□□□□ -2.1
RPN8YOR261C YRB2P40517 327 aa1.91□□□□□ -2.1
RPN8YOR261C LIA1P47120 325 aaKnown RBP1.91□□□□□ -2.1
RPN8YOR261C NOP13P53883 403 aaKnown RBP RIP-Chip data1.91□□□□□ -2.1not detected
RPN8YOR261C NUP49Q02199 472 aa1.91□□□□□ -2.1
RPN8YOR261C LPP1Q04396 274 aa1.91□□□□□ -2.1
RPN8YOR261C CFT1Q06632 1357 aaKnown RBP1.9□□□□□ -2.11
RPN8YOR261C RPL2AP0CX45 254 aaKnown RBP1.9□□□□□ -2.11
RPN8YOR261C RPL2BP0CX46 254 aaKnown RBP1.9□□□□□ -2.11
RPN8YOR261C PRE6P40303 254 aaKnown RBP1.9□□□□□ -2.11
RPN8YOR261C AIF1P52923 378 aa1.9□□□□□ -2.11
RPN8YOR261C FLO9P39712 1322 aa1.9□□□□□ -2.11
RPN8YOR261C UBR2Q07963 1872 aa1.89□□□□□ -2.11
RPN8YOR261C URA6P15700 204 aa1.89□□□□□ -2.11
RPN8YOR261C MSN4P33749 630 aa1.89□□□□□ -2.11
RPN8YOR261C UPS2P35200 230 aa1.89□□□□□ -2.11
RPN8YOR261C MZM1Q03429 123 aaPredicted RBP1.89□□□□□ -2.11
RPN8YOR261C YER085CP40058 173 aa1.88□□□□□ -2.11
RPN8YOR261C YNL217WP40152 326 aa1.88□□□□□ -2.11
RPN8YOR261C DOC1P53068 250 aa1.88□□□□□ -2.11
RPN8YOR261C YLR156WP0CE96 114 aa1.87□□□□□ -2.11
RPN8YOR261C YLR159WP0CE97 114 aa1.87□□□□□ -2.11
RPN8YOR261C YLR161WP0CE98 114 aa1.87□□□□□ -2.11
RPN8YOR261C FPR1P20081 114 aaKnown RBP1.87□□□□□ -2.11
RPN8YOR261C ATG22P25568 528 aa1.87□□□□□ -2.11
RPN8YOR261C FZF1P32805 299 aa1.87□□□□□ -2.11
RPN8YOR261C POP4P38336 279 aa1.87□□□□□ -2.11
RPN8YOR261C RPL13BP40212 199 aaKnown RBP1.87□□□□□ -2.11
RPN8YOR261C MIC26P50087 233 aa1.87□□□□□ -2.11
RPN8YOR261C FYV6P53913 173 aa1.87□□□□□ -2.11
RPN8YOR261C RPL13AQ12690 199 aaPredicted RBP1.87□□□□□ -2.11
RPN8YOR261C CDC28P00546 298 aaKnown RBP1.86□□□□□ -2.11
RPN8YOR261C SNZ1Q03148 297 aa1.86□□□□□ -2.11
RPN8YOR261C CDC123Q05791 360 aa1.86□□□□□ -2.11
RPN8YOR261C MRPS28P21771 286 aa1.85□□□□□ -2.11
RPN8YOR261C BRR6P53062 197 aa1.85□□□□□ -2.11
RPN8YOR261C ALG13P53178 202 aa1.85□□□□□ -2.11
RPN8YOR261C DRS2P39524 1355 aa1.85□□□□□ -2.11
RPN8YOR261C RHO1P06780 209 aaKnown RBP1.84□□□□□ -2.11
RPN8YOR261C VMA6P32366 345 aaKnown RBP1.84□□□□□ -2.11
RPN8YOR261C SSO1P32867 290 aa1.84□□□□□ -2.11
RPN8YOR261C MRPL28P36527 147 aa1.84□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 110.3 ms