RNA–Protein interactions for RNA: YLR417W

VPS36, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS36, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS36YLR417W ATG5Q12380 294 aa3.73□□□□□ -1.81
VPS36YLR417W NOT5Q12514 560 aaPredicted RBP3.73□□□□□ -1.81
VPS36YLR417W UTP10P42945 1769 aaKnown RBP3.72□□□□□ -1.81
VPS36YLR417W RHO1P06780 209 aaKnown RBP3.72□□□□□ -1.81
VPS36YLR417W NHP6BP11633 99 aaKnown RBP3.72□□□□□ -1.81
VPS36YLR417W MER1P16523 270 aa3.72□□□□□ -1.81
VPS36YLR417W CBF1P17106 351 aa3.72□□□□□ -1.81
VPS36YLR417W PBN1P25580 416 aa3.72□□□□□ -1.81
VPS36YLR417W VMA6P32366 345 aaKnown RBP3.72□□□□□ -1.81
VPS36YLR417W VPS21P36017 210 aaKnown RBP3.72□□□□□ -1.81
VPS36YLR417W YER137CP40083 148 aaKnown RBP3.72□□□□□ -1.81
VPS36YLR417W RMR1P53060 241 aa3.72□□□□□ -1.81
VPS36YLR417W TVP15Q03860 143 aa3.72□□□□□ -1.81
VPS36YLR417W YPL264CQ08980 353 aa3.72□□□□□ -1.81
VPS36YLR417W YPR202WQ08993 238 aa3.72□□□□□ -1.81
VPS36YLR417W BBP1Q12365 385 aa3.72□□□□□ -1.81
VPS36YLR417W TY4B-HP0C2J7 1802 aa3.71□□□□□ -1.82
VPS36YLR417W TY4B-JP47024 1803 aa3.71□□□□□ -1.82
VPS36YLR417W COS2P0CX12 379 aa3.71□□□□□ -1.82
VPS36YLR417W COS3P0CX13 379 aa3.71□□□□□ -1.82
VPS36YLR417W CSG2P35206 410 aa3.71□□□□□ -1.82
VPS36YLR417W VMA22P38784 181 aa3.71□□□□□ -1.82
VPS36YLR417W COS4P43542 379 aa3.71□□□□□ -1.82
VPS36YLR417W FMP32P43557 207 aa3.71□□□□□ -1.82
VPS36YLR417W YMR166CQ03829 368 aa3.71□□□□□ -1.82
VPS36YLR417W SPC2Q04969 178 aa3.71□□□□□ -1.82
VPS36YLR417W SMD2Q06217 110 aaKnown RBP3.71□□□□□ -1.82
VPS36YLR417W YLR031WQ07978 186 aa3.71□□□□□ -1.82
VPS36YLR417W YLR053CQ12026 108 aa3.71□□□□□ -1.82
VPS36YLR417W LSO2Q3E772 92 aaKnown RBP3.71□□□□□ -1.82
VPS36YLR417W THP2O13539 261 aaKnown RBP3.7□□□□□ -1.82
VPS36YLR417W ATP7P30902 174 aa3.7□□□□□ -1.82
VPS36YLR417W SLX1P38324 304 aa3.7□□□□□ -1.82
VPS36YLR417W CUE1P38428 203 aa3.7□□□□□ -1.82
VPS36YLR417W ALB1P47019 175 aaPredicted RBP3.7□□□□□ -1.82
VPS36YLR417W HST4P53688 370 aa3.7□□□□□ -1.82
VPS36YLR417W YDR476CQ03362 224 aa3.7□□□□□ -1.82
VPS36YLR417W DML1Q03652 475 aa3.7□□□□□ -1.82
VPS36YLR417W GPI17Q04080 534 aa3.7□□□□□ -1.82
VPS36YLR417W GAL83Q04739 417 aa3.7□□□□□ -1.82
VPS36YLR417W DCR2Q05924 578 aa3.7□□□□□ -1.82
VPS36YLR417W GIS3Q12418 502 aa3.7□□□□□ -1.82
VPS36YLR417W CDC33P07260 213 aaKnown RBP3.7□□□□□ -1.82
VPS36YLR417W YKR104WP0CE69 306 aa3.7□□□□□ -1.82
VPS36YLR417W SEN2P16658 377 aa3.7□□□□□ -1.82
VPS36YLR417W PRE7P23724 241 aaKnown RBP3.7□□□□□ -1.82
VPS36YLR417W YCR102CP25608 368 aa3.7□□□□□ -1.82
VPS36YLR417W SGE1P33335 543 aa3.7□□□□□ -1.82
VPS36YLR417W YKL075CP36083 450 aa3.7□□□□□ -1.82
VPS36YLR417W SNZ3P43545 298 aa3.7□□□□□ -1.82
VPS36YLR417W CGR1P53188 120 aa3.7□□□□□ -1.82
VPS36YLR417W RSM27P53305 110 aa3.7□□□□□ -1.82
VPS36YLR417W INM2Q05533 292 aa3.7□□□□□ -1.82
VPS36YLR417W YPR147CQ06522 304 aaKnown RBP3.7□□□□□ -1.82
VPS36YLR417W STF2P16965 84 aa3.69□□□□□ -1.82
VPS36YLR417W YBL081WP38180 368 aaKnown RBP3.69□□□□□ -1.82
VPS36YLR417W ARN2P38724 620 aa3.69□□□□□ -1.82
VPS36YLR417W AST2P39945 430 aaKnown RBP3.69□□□□□ -1.82
VPS36YLR417W RAD17P48581 401 aa3.69□□□□□ -1.82
VPS36YLR417W ZRG17P53735 605 aa3.69□□□□□ -1.82
VPS36YLR417W SPG4Q04438 115 aa3.69□□□□□ -1.82
VPS36YLR417W FKS3Q04952 1785 aa3.68□□□□□ -1.82
VPS36YLR417W FBA1P14540 359 aaKnown RBP3.68□□□□□ -1.82
VPS36YLR417W MGT1P26188 188 aa3.68□□□□□ -1.82
VPS36YLR417W FMP23P38231 175 aa3.68□□□□□ -1.82
VPS36YLR417W TRM7P38238 310 aaKnown RBP3.68□□□□□ -1.82
VPS36YLR417W MTW1P39731 289 aa3.68□□□□□ -1.82
VPS36YLR417W COX15P40086 486 aa3.68□□□□□ -1.82
VPS36YLR417W YRB2P40517 327 aa3.68□□□□□ -1.82
VPS36YLR417W SNZ2P53824 298 aa3.68□□□□□ -1.82
VPS36YLR417W RHO3Q00245 231 aaKnown RBP3.68□□□□□ -1.82
VPS36YLR417W GPA2P10823 449 aa3.67□□□□□ -1.82
VPS36YLR417W MIC12P38341 106 aa3.67□□□□□ -1.82
VPS36YLR417W PHB1P40961 287 aa3.67□□□□□ -1.82
VPS36YLR417W YFH7P43591 353 aa3.67□□□□□ -1.82
VPS36YLR417W MRH4P53166 561 aa3.67□□□□□ -1.82
VPS36YLR417W GIM3P53900 129 aa3.67□□□□□ -1.82
VPS36YLR417W RRP17Q04031 235 aaPredicted RBP3.67□□□□□ -1.82
VPS36YLR417W CLP1Q08685 445 aaPredicted RBP3.67□□□□□ -1.82
VPS36YLR417W YPS3Q12303 508 aa3.67□□□□□ -1.82
VPS36YLR417W CDC36P06100 191 aaPredicted RBP3.67□□□□□ -1.82
VPS36YLR417W SNF4P12904 322 aa3.67□□□□□ -1.82
VPS36YLR417W RME1P32338 300 aaKnown RBP3.67□□□□□ -1.82
VPS36YLR417W DRE2P36152 348 aa3.67□□□□□ -1.82
VPS36YLR417W MRPL39P36533 70 aa3.67□□□□□ -1.82
VPS36YLR417W PDX3P38075 228 aaKnown RBP3.67□□□□□ -1.82
VPS36YLR417W YBR285WP38354 144 aa3.67□□□□□ -1.82
VPS36YLR417W YHR127WP38833 243 aaKnown RBP3.67□□□□□ -1.82
VPS36YLR417W SUR2P38992 349 aa3.67□□□□□ -1.82
VPS36YLR417W PRE6P40303 254 aaKnown RBP3.67□□□□□ -1.82
VPS36YLR417W YFR045WP43617 309 aa3.67□□□□□ -1.82
VPS36YLR417W SNX4P47057 423 aa3.67□□□□□ -1.82
VPS36YLR417W CPR7P47103 393 aa3.67□□□□□ -1.82
VPS36YLR417W GET1P53192 235 aa3.67□□□□□ -1.82
VPS36YLR417W YPL039WQ03080 316 aa3.67□□□□□ -1.82
VPS36YLR417W BNA7Q04066 261 aa3.67□□□□□ -1.82
VPS36YLR417W YET3Q07451 203 aa3.67□□□□□ -1.82
VPS36YLR417W NSL1Q12143 216 aa3.67□□□□□ -1.82
VPS36YLR417W RTR2Q12378 196 aa3.67□□□□□ -1.82
VPS36YLR417W MED11Q99278 115 aa3.67□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 137.8 ms