RNA–Protein interactions for RNA: YLR240W

VPS34, Transcript of Phosphatidylinositol (PI) 3-kinase that synthesizes PI-3-phosphate, yeastyeast

Gene VPS34, Length 2,628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS34YLR240W YPR174CQ06616 221 aaPredicted RBP1.65□□□□□ -2.15
VPS34YLR240W IRC19Q07843 230 aa1.65□□□□□ -2.15
VPS34YLR240W BSC6Q08280 497 aa1.65□□□□□ -2.15
VPS34YLR240W DCI1Q08558 271 aa1.65□□□□□ -2.15
VPS34YLR240W YOR385WQ08909 290 aa1.65□□□□□ -2.15
VPS34YLR240W NIP7Q08962 181 aaKnown RBP1.65□□□□□ -2.15
VPS34YLR240W YOR283WQ12040 230 aaKnown RBP1.65□□□□□ -2.15
VPS34YLR240W SPC3Q12133 184 aa1.65□□□□□ -2.15
VPS34YLR240W ERD1P16151 362 aa1.64□□□□□ -2.15
VPS34YLR240W IFM1P25038 676 aa1.64□□□□□ -2.15
VPS34YLR240W ATG22P25568 528 aa1.64□□□□□ -2.15
VPS34YLR240W POP5P28005 173 aa1.64□□□□□ -2.15
VPS34YLR240W FUN26P31381 517 aa1.64□□□□□ -2.15
VPS34YLR240W PPQ1P32945 549 aa1.64□□□□□ -2.15
VPS34YLR240W NSG1P38837 291 aa1.64□□□□□ -2.15
VPS34YLR240W SLM1P40485 686 aa1.64□□□□□ -2.15
VPS34YLR240W FMC1P40491 155 aa1.64□□□□□ -2.15
VPS34YLR240W YJR141WP47172 347 aaPredicted RBP1.64□□□□□ -2.15
VPS34YLR240W YDR541CQ03049 344 aa1.64□□□□□ -2.15
VPS34YLR240W HIS3P06633 220 aa1.64□□□□□ -2.15
VPS34YLR240W YSF3P0C074 85 aaPredicted RBP1.64□□□□□ -2.15
VPS34YLR240W ARO3P14843 370 aaKnown RBP1.64□□□□□ -2.15
VPS34YLR240W UTR1P21373 530 aa1.64□□□□□ -2.15
VPS34YLR240W YCR101CP25607 182 aa1.64□□□□□ -2.15
VPS34YLR240W YCR016WP25617 290 aaKnown RBP1.64□□□□□ -2.15
VPS34YLR240W RFA3P26755 122 aaKnown RBP1.64□□□□□ -2.15
VPS34YLR240W TRR1P29509 319 aaKnown RBP1.64□□□□□ -2.15
VPS34YLR240W ARC19P33204 171 aaKnown RBP1.64□□□□□ -2.15
VPS34YLR240W SPT10P35208 640 aa1.64□□□□□ -2.15
VPS34YLR240W SHG1P38337 142 aa1.64□□□□□ -2.15
VPS34YLR240W COS8P38723 381 aa1.64□□□□□ -2.15
VPS34YLR240W YMR144WP40214 342 aaKnown RBP1.64□□□□□ -2.15
VPS34YLR240W AVT7P40501 490 aa1.64□□□□□ -2.15
VPS34YLR240W AIM25P47140 327 aa1.64□□□□□ -2.15
VPS34YLR240W SAY1P53324 424 aa1.64□□□□□ -2.15
VPS34YLR240W YPL039WQ03080 316 aa1.64□□□□□ -2.15
VPS34YLR240W SNX41Q04053 625 aa1.64□□□□□ -2.15
VPS34YLR240W DCS1Q06151 350 aa1.64□□□□□ -2.15
VPS34YLR240W FEX1Q08913 375 aa1.64□□□□□ -2.15
VPS34YLR240W PDX1P16451 410 aa1.63□□□□□ -2.15
VPS34YLR240W SAR1P20606 190 aaKnown RBP1.63□□□□□ -2.15
VPS34YLR240W CWP1P28319 239 aa1.63□□□□□ -2.15
VPS34YLR240W YEF1P32622 495 aa1.63□□□□□ -2.15
VPS34YLR240W NRP1P32770 719 aaKnown RBP RIP-Chip data1.63□□□□□ -2.15not detected
VPS34YLR240W UTP30P36144 274 aaKnown RBP1.63□□□□□ -2.15
VPS34YLR240W RRF1P38771 230 aa1.63□□□□□ -2.15
VPS34YLR240W UTP25P40498 721 aaKnown RBP1.63□□□□□ -2.15
VPS34YLR240W YKE4P40544 346 aa1.63□□□□□ -2.15
VPS34YLR240W PHB2P50085 310 aa1.63□□□□□ -2.15
VPS34YLR240W UBC12P52491 188 aa1.63□□□□□ -2.15
VPS34YLR240W CDH1P53197 566 aa1.63□□□□□ -2.15
VPS34YLR240W MAL12P53341 584 aa1.63□□□□□ -2.15
VPS34YLR240W PDR16P53860 351 aaKnown RBP1.63□□□□□ -2.15
VPS34YLR240W OCA2P53949 197 aa1.63□□□□□ -2.15
VPS34YLR240W GRX5Q02784 150 aa1.63□□□□□ -2.15
VPS34YLR240W PEX25Q02969 394 aa1.63□□□□□ -2.15
VPS34YLR240W MRX8Q05473 314 aa1.63□□□□□ -2.15
VPS34YLR240W YPR147CQ06522 304 aaKnown RBP1.63□□□□□ -2.15
VPS34YLR240W YOL024WQ08172 172 aa1.63□□□□□ -2.15
VPS34YLR240W YNG1Q08465 219 aa1.63□□□□□ -2.15
VPS34YLR240W YLR099W-AQ3E798 87 aa1.63□□□□□ -2.15
VPS34YLR240W PRB1P09232 635 aa1.63□□□□□ -2.15
VPS34YLR240W PUT1P09368 476 aa1.63□□□□□ -2.15
VPS34YLR240W SEN2P16658 377 aa1.63□□□□□ -2.15
VPS34YLR240W YPK2P18961 677 aa1.63□□□□□ -2.15
VPS34YLR240W SCO1P23833 295 aa1.63□□□□□ -2.15
VPS34YLR240W CAM1P29547 415 aaKnown RBP1.63□□□□□ -2.15
VPS34YLR240W PEX32P38292 413 aa1.63□□□□□ -2.15
VPS34YLR240W PTI1P39927 425 aaPredicted RBP1.63□□□□□ -2.15
VPS34YLR240W HPA3P39979 161 aa1.63□□□□□ -2.15
VPS34YLR240W YNR062CP53748 327 aa1.63□□□□□ -2.15
VPS34YLR240W NRK1P53915 240 aa1.63□□□□□ -2.15
VPS34YLR240W CTF19Q02732 369 aa1.63□□□□□ -2.15
VPS34YLR240W BNA7Q04066 261 aa1.63□□□□□ -2.15
VPS34YLR240W HNT1Q04344 158 aaKnown RBP1.63□□□□□ -2.15
VPS34YLR240W COX20Q04935 205 aa1.63□□□□□ -2.15
VPS34YLR240W NNT1Q05874 261 aa1.63□□□□□ -2.15
VPS34YLR240W YLR456WQ06199 204 aa1.63□□□□□ -2.15
VPS34YLR240W TAZ1Q06510 381 aa1.63□□□□□ -2.15
VPS34YLR240W PRP11Q07350 266 aaPredicted RBP1.63□□□□□ -2.15
VPS34YLR240W IRC25Q07951 179 aa1.63□□□□□ -2.15
VPS34YLR240W YOL029CQ08187 201 aa1.63□□□□□ -2.15
VPS34YLR240W PEX27Q08580 376 aa1.63□□□□□ -2.15
VPS34YLR240W FEX2Q08991 375 aa1.63□□□□□ -2.15
VPS34YLR240W AEP3Q12089 606 aa1.63□□□□□ -2.15
VPS34YLR240W TPT1Q12272 230 aaKnown RBP1.63□□□□□ -2.15
VPS34YLR240W CYR1P08678 2026 aaKnown RBP1.63□□□□□ -2.15
VPS34YLR240W CDC36P06100 191 aaPredicted RBP1.62□□□□□ -2.15
VPS34YLR240W MET2P08465 486 aa1.62□□□□□ -2.15
VPS34YLR240W YHR214C-DP0CX93 97 aa1.62□□□□□ -2.15
VPS34YLR240W MRP17P28778 131 aa1.62□□□□□ -2.15
VPS34YLR240W ARO7P32178 256 aa1.62□□□□□ -2.15
VPS34YLR240W VMA8P32610 256 aaKnown RBP1.62□□□□□ -2.15
VPS34YLR240W MDL1P33310 695 aa1.62□□□□□ -2.15
VPS34YLR240W SNC2P33328 115 aa1.62□□□□□ -2.15
VPS34YLR240W RPS27AP35997 82 aaKnown RBP1.62□□□□□ -2.15
VPS34YLR240W MRPL27P36526 146 aaPredicted RBP1.62□□□□□ -2.15
VPS34YLR240W RPS27BP38711 82 aa1.62□□□□□ -2.15
VPS34YLR240W ECM34P38728 170 aa1.62□□□□□ -2.15
VPS34YLR240W RTC3P38804 111 aaPredicted RBP1.62□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 27.2 ms