RNA–Protein interactions for RNA: YLR115W

CFT2, Transcript of Subunit of the mRNA cleavage and polyadenlylation factor (CPF), yeastyeast

Gene CFT2, Length 2,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT2YLR115W YCR100CP25606 316 aa1.64□□□□□ -2.15
CFT2YLR115W BUB3P26449 341 aa1.64□□□□□ -2.15
CFT2YLR115W RPL16AP26784 199 aaKnown RBP1.64□□□□□ -2.15
CFT2YLR115W PMT2P31382 759 aa1.64□□□□□ -2.15
CFT2YLR115W TIR2P33890 251 aa1.64□□□□□ -2.15
CFT2YLR115W FRE2P36033 711 aa1.64□□□□□ -2.15
CFT2YLR115W MRP21P38175 177 aa1.64□□□□□ -2.15
CFT2YLR115W OXA1P39952 402 aa1.64□□□□□ -2.15
CFT2YLR115W RGI1P40043 161 aaPredicted RBP1.64□□□□□ -2.15
CFT2YLR115W YER137CP40083 148 aaKnown RBP1.64□□□□□ -2.15
CFT2YLR115W TIS11P47977 285 aa1.64□□□□□ -2.15
CFT2YLR115W NBP35P52920 328 aa1.64□□□□□ -2.15
CFT2YLR115W CDH1P53197 566 aa1.64□□□□□ -2.15
CFT2YLR115W NRM1P53718 249 aa1.64□□□□□ -2.15
CFT2YLR115W PDR17P53844 350 aa1.64□□□□□ -2.15
CFT2YLR115W UBC7Q02159 165 aa1.64□□□□□ -2.15
CFT2YLR115W ARL3Q02804 198 aa1.64□□□□□ -2.15
CFT2YLR115W UTP15Q04305 513 aaKnown RBP1.64□□□□□ -2.15
CFT2YLR115W HNT1Q04344 158 aaKnown RBP1.64□□□□□ -2.15
CFT2YLR115W YML096WQ04489 525 aa1.64□□□□□ -2.15
CFT2YLR115W FRQ1Q06389 190 aa1.64□□□□□ -2.15
CFT2YLR115W PRP11Q07350 266 aaPredicted RBP1.64□□□□□ -2.15
CFT2YLR115W RRP40Q08285 240 aaKnown RBP1.64□□□□□ -2.15
CFT2YLR115W SRL2Q12020 392 aa1.64□□□□□ -2.15
CFT2YLR115W PCL9Q12477 304 aa1.64□□□□□ -2.15
CFT2YLR115W DET1Q99288 334 aaKnown RBP1.64□□□□□ -2.15
CFT2YLR115W LYS2P07702 1392 aa1.63□□□□□ -2.15
CFT2YLR115W CYC3P06182 269 aa1.63□□□□□ -2.15
CFT2YLR115W SPS100P13130 326 aa1.63□□□□□ -2.15
CFT2YLR115W FCY2P17064 533 aa1.63□□□□□ -2.15
CFT2YLR115W SAM2P19358 384 aaKnown RBP1.63□□□□□ -2.15
CFT2YLR115W DBF2P22204 572 aa1.63□□□□□ -2.15
CFT2YLR115W ATG22P25568 528 aa1.63□□□□□ -2.15
CFT2YLR115W PEX34P25584 144 aa1.63□□□□□ -2.15
CFT2YLR115W MRPL24P36525 258 aaPredicted RBP1.63□□□□□ -2.15
CFT2YLR115W ECM33P38248 429 aaKnown RBP1.63□□□□□ -2.15
CFT2YLR115W FMP32P43557 207 aa1.63□□□□□ -2.15
CFT2YLR115W WWM1P43582 211 aaKnown RBP1.63□□□□□ -2.15
CFT2YLR115W GWT1P47026 490 aa1.63□□□□□ -2.15
CFT2YLR115W YPS5P53057 165 aa1.63□□□□□ -2.15
CFT2YLR115W TRM44Q02648 567 aaKnown RBP1.63□□□□□ -2.15
CFT2YLR115W YMR253CQ04835 414 aa1.63□□□□□ -2.15
CFT2YLR115W TIM18Q08749 192 aa1.63□□□□□ -2.15
CFT2YLR115W IES3Q12345 250 aa1.63□□□□□ -2.15
CFT2YLR115W EAF3Q12432 401 aa1.63□□□□□ -2.15
CFT2YLR115W RDI1Q12434 202 aa1.63□□□□□ -2.15
CFT2YLR115W OAC1P32332 324 aa1.63□□□□□ -2.15
CFT2YLR115W ALK2P32789 676 aaPredicted RBP1.63□□□□□ -2.15
CFT2YLR115W NTF2P33331 125 aaKnown RBP1.63□□□□□ -2.15
CFT2YLR115W MRPL28P36527 147 aa1.63□□□□□ -2.15
CFT2YLR115W FMP23P38231 175 aa1.63□□□□□ -2.15
CFT2YLR115W YPC1P38298 316 aa1.63□□□□□ -2.15
CFT2YLR115W POP4P38336 279 aa1.63□□□□□ -2.15
CFT2YLR115W COX14P39103 70 aa1.63□□□□□ -2.15
CFT2YLR115W FCY21P40039 528 aa1.63□□□□□ -2.15
CFT2YLR115W LSM4P40070 187 aaKnown RBP1.63□□□□□ -2.15
CFT2YLR115W MOB2P43563 287 aa1.63□□□□□ -2.15
CFT2YLR115W PMT4P46971 762 aa1.63□□□□□ -2.15
CFT2YLR115W MPA43P53583 542 aaPredicted RBP1.63□□□□□ -2.15
CFT2YLR115W MRX11Q03079 207 aa1.63□□□□□ -2.15
CFT2YLR115W GMC1Q04399 608 aa1.63□□□□□ -2.15
CFT2YLR115W RDL2Q08742 149 aaKnown RBP1.63□□□□□ -2.15
CFT2YLR115W YPL225WQ08971 146 aaKnown RBP1.63□□□□□ -2.15
CFT2YLR115W GEP5Q12393 293 aa1.63□□□□□ -2.15
CFT2YLR115W MHT1Q12525 324 aa1.63□□□□□ -2.15
CFT2YLR115W FOL3Q12676 427 aaPredicted RBP1.63□□□□□ -2.15
CFT2YLR115W SPT15P13393 240 aaKnown RBP1.62□□□□□ -2.15
CFT2YLR115W CAP2P13517 287 aa1.62□□□□□ -2.15
CFT2YLR115W HEM15P16622 393 aa1.62□□□□□ -2.15
CFT2YLR115W FRM2P37261 193 aa1.62□□□□□ -2.15
CFT2YLR115W PRS3P38689 320 aaKnown RBP1.62□□□□□ -2.15
CFT2YLR115W HPM1P40481 377 aa1.62□□□□□ -2.15
CFT2YLR115W MAM33P40513 266 aa1.62□□□□□ -2.15
CFT2YLR115W RRT5P43607 289 aa1.62□□□□□ -2.15
CFT2YLR115W YJR015WP47090 510 aa1.62□□□□□ -2.15
CFT2YLR115W MCM22P47167 239 aa1.62□□□□□ -2.15
CFT2YLR115W TOS2P50078 622 aa1.62□□□□□ -2.15
CFT2YLR115W UBC13P52490 153 aa1.62□□□□□ -2.15
CFT2YLR115W YGL034CP53186 121 aa1.62□□□□□ -2.15
CFT2YLR115W YNR048WP53740 393 aa1.62□□□□□ -2.15
CFT2YLR115W CSN9Q03981 162 aa1.62□□□□□ -2.15
CFT2YLR115W YMR027WQ04371 470 aa1.62□□□□□ -2.15
CFT2YLR115W YMR315WQ04869 349 aaKnown RBP1.62□□□□□ -2.15
CFT2YLR115W GAS2Q06135 555 aa1.62□□□□□ -2.15
CFT2YLR115W GAT3Q07928 141 aa1.62□□□□□ -2.15
CFT2YLR115W YPL257WQ08974 193 aa1.62□□□□□ -2.15
CFT2YLR115W MRX4Q12467 430 aa1.62□□□□□ -2.15
CFT2YLR115W EFG1Q3E705 233 aaKnown RBP1.62□□□□□ -2.15
CFT2YLR115W RPL25P04456 142 aaKnown RBP1.62□□□□□ -2.15
CFT2YLR115W PIS1P06197 220 aaKnown RBP1.62□□□□□ -2.15
CFT2YLR115W YKR104WP0CE69 306 aa1.62□□□□□ -2.15
CFT2YLR115W YOL163WP0CF20 169 aa1.62□□□□□ -2.15
CFT2YLR115W SSC1P0CS90 654 aaKnown RBP1.62□□□□□ -2.15
CFT2YLR115W BUD23P25627 275 aaPredicted RBP1.62□□□□□ -2.15
CFT2YLR115W TIP1P27654 210 aaPredicted RBP1.62□□□□□ -2.15
CFT2YLR115W YEL045CP32616 141 aa1.62□□□□□ -2.15
CFT2YLR115W YKL187CP34231 750 aa1.62□□□□□ -2.15
CFT2YLR115W GPX2P38143 162 aa1.62□□□□□ -2.15
CFT2YLR115W TIF34P40217 347 aaKnown RBP1.62□□□□□ -2.15
CFT2YLR115W YCH1P42937 148 aa1.62□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 39.4 ms