RNA–Protein interactions for RNA: YLR097C

HRT3, Transcript of Putative SCF-ubiquitin ligase F-box protein, yeast

Gene HRT3, Length 1,035 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HRT3	YLR097C	HEM25	Q07534	307 aa		2.64	□□□□□ -1.99
HRT3	YLR097C	SEY1	Q99287	776 aa		2.64	□□□□□ -1.99
HRT3	YLR097C	URA6	P15700	204 aa		2.63	□□□□□ -1.99
HRT3	YLR097C	PBN1	P25580	416 aa		2.63	□□□□□ -1.99
HRT3	YLR097C	ECM33	P38248	429 aa	Known RBP	2.63	□□□□□ -1.99
HRT3	YLR097C	URA8	P38627	578 aa	Predicted RBP	2.63	□□□□□ -1.99
HRT3	YLR097C	DOG1	P38774	246 aa		2.63	□□□□□ -1.99
HRT3	YLR097C	DAD3	P69850	94 aa		2.63	□□□□□ -1.99
HRT3	YLR097C	YMD8	Q03697	442 aa		2.63	□□□□□ -1.99
HRT3	YLR097C	ATO3	Q12359	275 aa		2.63	□□□□□ -1.99
HRT3	YLR097C	LSO2	Q3E772	92 aa	Known RBP	2.63	□□□□□ -1.99
HRT3	YLR097C	YHR139C-A	O13536	103 aa		2.62	□□□□□ -1.99
HRT3	YLR097C	YBR121C-A	P0C5L4	52 aa		2.62	□□□□□ -1.99
HRT3	YLR097C	YIL001W	P40560	513 aa		2.62	□□□□□ -1.99
HRT3	YLR097C	YRB1	P41920	201 aa	Known RBP	2.62	□□□□□ -1.99
HRT3	YLR097C	DID2	P69771	204 aa		2.62	□□□□□ -1.99
HRT3	YLR097C	TIM11	P81449	96 aa	Predicted RBP	2.62	□□□□□ -1.99
HRT3	YLR097C	MSW1	P04803	379 aa		2.61	□□□□□ -1.99
HRT3	YLR097C	RTC3	P38804	111 aa	Predicted RBP	2.61	□□□□□ -1.99
HRT3	YLR097C	YJL027C	P47063	138 aa	Predicted RBP	2.61	□□□□□ -1.99
HRT3	YLR097C	BRR6	P53062	197 aa		2.61	□□□□□ -1.99
HRT3	YLR097C	YGR219W	P53307	113 aa		2.61	□□□□□ -1.99
HRT3	YLR097C	DCN1	Q12395	269 aa		2.61	□□□□□ -1.99
HRT3	YLR097C	NCB2	Q92317	146 aa		2.61	□□□□□ -1.99
HRT3	YLR097C	DRS2	P39524	1355 aa		2.61	□□□□□ -1.99
HRT3	YLR097C	RPL28	P02406	149 aa	Known RBP	2.6	□□□□□ -1.99
HRT3	YLR097C	GRX2	P17695	143 aa	Known RBP	2.6	□□□□□ -1.99
HRT3	YLR097C	COQ1	P18900	473 aa		2.6	□□□□□ -1.99
HRT3	YLR097C	MDH3	P32419	343 aa	Known RBP RIP-Chip data	2.6	□□□□□ -1.99	not detected
HRT3	YLR097C	SRY1	P36007	326 aa		2.6	□□□□□ -1.99
HRT3	YLR097C	NUP57	P48837	541 aa		2.6	□□□□□ -1.99
HRT3	YLR097C	ALG13	P53178	202 aa		2.6	□□□□□ -1.99
HRT3	YLR097C	YKL183C-A	Q3E765	70 aa		2.6	□□□□□ -1.99
HRT3	YLR097C	STE18	P18852	110 aa		2.59	□□□□□ -1.99
HRT3	YLR097C	DOG2	P38773	246 aa		2.59	□□□□□ -1.99
HRT3	YLR097C	ERG28	P40030	148 aa		2.59	□□□□□ -1.99
HRT3	YLR097C	FCY21	P40039	528 aa		2.59	□□□□□ -1.99
HRT3	YLR097C	CIS3	P47001	227 aa		2.59	□□□□□ -1.99
HRT3	YLR097C	PGA2	P53903	129 aa		2.59	□□□□□ -1.99
HRT3	YLR097C	MRPS8	Q03799	155 aa		2.59	□□□□□ -1.99
HRT3	YLR097C	NEJ1	Q06148	342 aa		2.59	□□□□□ -1.99
HRT3	YLR097C	YHR086W-A	Q3E746	53 aa		2.59	□□□□□ -1.99
HRT3	YLR097C	CDC28	P00546	298 aa	Known RBP	2.58	□□□□□ -2
HRT3	YLR097C	YPR170W-B	P0C5R9	85 aa		2.58	□□□□□ -2
HRT3	YLR097C	FBA1	P14540	359 aa	Known RBP	2.58	□□□□□ -2
HRT3	YLR097C	PEX4	P29340	183 aa		2.58	□□□□□ -2
HRT3	YLR097C	YNL010W	P53981	241 aa	Known RBP	2.58	□□□□□ -2
HRT3	YLR097C	ARR2	Q06597	130 aa		2.58	□□□□□ -2
HRT3	YLR097C	CDC8	P00572	216 aa		2.57	□□□□□ -2
HRT3	YLR097C	NTG1	P31378	399 aa		2.57	□□□□□ -2
HRT3	YLR097C	CBT1	P36038	271 aa	Predicted RBP	2.57	□□□□□ -2
HRT3	YLR097C	BXI1	P48558	297 aa		2.57	□□□□□ -2
HRT3	YLR097C	RAD17	P48581	401 aa		2.57	□□□□□ -2
HRT3	YLR097C	PRM8	P53174	237 aa		2.57	□□□□□ -2
HRT3	YLR097C	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	2.57	□□□□□ -2	not detected
HRT3	YLR097C	JLP1	Q12358	412 aa		2.57	□□□□□ -2
HRT3	YLR097C	ARG80	P07249	177 aa		2.56	□□□□□ -2
HRT3	YLR097C	SCL1	P21243	252 aa	Known RBP	2.56	□□□□□ -2
HRT3	YLR097C	OAC1	P32332	324 aa		2.56	□□□□□ -2
HRT3	YLR097C	PRP18	P33411	251 aa	Predicted RBP	2.56	□□□□□ -2
HRT3	YLR097C	IRC22	P40006	225 aa		2.56	□□□□□ -2
HRT3	YLR097C	YNL194C	P40169	301 aa		2.56	□□□□□ -2
HRT3	YLR097C	FAR7	P43592	221 aa		2.56	□□□□□ -2
HRT3	YLR097C	MGA1	P53050	456 aa		2.56	□□□□□ -2
HRT3	YLR097C	YDR248C	Q03786	193 aa		2.56	□□□□□ -2
HRT3	YLR097C	LPP1	Q04396	274 aa		2.56	□□□□□ -2
HRT3	YLR097C	BOL1	Q3E793	110 aa		2.56	□□□□□ -2
HRT3	YLR097C	CDC33	P07260	213 aa	Known RBP	2.55	□□□□□ -2
HRT3	YLR097C	DBF2	P22204	572 aa		2.55	□□□□□ -2
HRT3	YLR097C	ATG22	P25568	528 aa		2.55	□□□□□ -2
HRT3	YLR097C	PHO88	P38264	188 aa	Predicted RBP	2.55	□□□□□ -2
HRT3	YLR097C	ERV15	P38312	142 aa		2.55	□□□□□ -2
HRT3	YLR097C	YHR180W	P38868	163 aa		2.55	□□□□□ -2
HRT3	YLR097C	ADO1	P47143	340 aa	Known RBP	2.55	□□□□□ -2
HRT3	YLR097C	BNA7	Q04066	261 aa		2.55	□□□□□ -2
HRT3	YLR097C	PSF1	Q12488	208 aa		2.55	□□□□□ -2
HRT3	YLR097C	RPB4	P20433	221 aa	Predicted RBP	2.54	□□□□□ -2
HRT3	YLR097C	APS1	P35181	156 aa		2.54	□□□□□ -2
HRT3	YLR097C	YKE4	P40544	346 aa		2.54	□□□□□ -2
HRT3	YLR097C	ERG25	P53045	309 aa		2.54	□□□□□ -2
HRT3	YLR097C	USB1	Q12208	290 aa	Known RBP	2.54	□□□□□ -2
HRT3	YLR097C	GIS3	Q12418	502 aa		2.54	□□□□□ -2
HRT3	YLR097C	PRX1	P34227	261 aa	Known RBP	2.53	□□□□□ -2
HRT3	YLR097C	POP4	P38336	279 aa		2.53	□□□□□ -2
HRT3	YLR097C	RAS2	P01120	322 aa	Known RBP	2.52	□□□□□ -2.01
HRT3	YLR097C	IRC18	P47056	224 aa		2.52	□□□□□ -2.01
HRT3	YLR097C	CWC23	P52868	283 aa	Predicted RBP	2.52	□□□□□ -2.01
HRT3	YLR097C	SNZ1	Q03148	297 aa		2.52	□□□□□ -2.01
HRT3	YLR097C	CWC21	Q03375	135 aa	Known RBP	2.52	□□□□□ -2.01
HRT3	YLR097C	TRM12	Q04235	462 aa		2.52	□□□□□ -2.01
HRT3	YLR097C	TDA8	Q6B2U8	126 aa		2.52	□□□□□ -2.01
HRT3	YLR097C	YDR157W	A0A023PZE8	133 aa		2.51	□□□□□ -2.01
HRT3	YLR097C	REP2	P03872	296 aa		2.51	□□□□□ -2.01
HRT3	YLR097C	YHR022C	P38763	256 aa		2.51	□□□□□ -2.01
HRT3	YLR097C	AYR1	P40471	297 aa		2.51	□□□□□ -2.01
HRT3	YLR097C	PRM10	P42946	383 aa		2.51	□□□□□ -2.01
HRT3	YLR097C	PDR17	P53844	350 aa		2.51	□□□□□ -2.01
HRT3	YLR097C	CYT2	Q00873	224 aa		2.51	□□□□□ -2.01
HRT3	YLR097C	YLR156W	P0CE96	114 aa		2.5	□□□□□ -2.01
HRT3	YLR097C	YLR159W	P0CE97	114 aa		2.5	□□□□□ -2.01

Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms