RNA–Protein interactions for RNA: YIL148W

RPL40A, Transcript of Ubiquitin-ribosomal 60S subunit protein L40A fusion protein, yeastyeast

Gene RPL40A, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40AYIL148W DOG2P38773 246 aa1.47□□□□□ -2.17
RPL40AYIL148W DOG1P38774 246 aa1.47□□□□□ -2.17
RPL40AYIL148W RPF1P38805 295 aaKnown RBP1.47□□□□□ -2.17
RPL40AYIL148W ERG28P40030 148 aa1.47□□□□□ -2.17
RPL40AYIL148W MNN5P46982 586 aa1.47□□□□□ -2.17
RPL40AYIL148W YJR056CP47115 236 aa1.47□□□□□ -2.17
RPL40AYIL148W RAD17P48581 401 aa1.47□□□□□ -2.17
RPL40AYIL148W NUP57P48837 541 aa1.47□□□□□ -2.17
RPL40AYIL148W BRR6P53062 197 aa1.47□□□□□ -2.17
RPL40AYIL148W PRM8P53174 237 aa1.47□□□□□ -2.17
RPL40AYIL148W ERV29P53337 310 aa1.47□□□□□ -2.17
RPL40AYIL148W RSM10Q03201 203 aa1.47□□□□□ -2.17
RPL40AYIL148W AKR2Q12013 749 aa1.47□□□□□ -2.17
RPL40AYIL148W YOR283WQ12040 230 aaKnown RBP1.47□□□□□ -2.17
RPL40AYIL148W TPO4Q12256 659 aa1.47□□□□□ -2.17
RPL40AYIL148W ATO3Q12359 275 aa1.47□□□□□ -2.17
RPL40AYIL148W DCN1Q12395 269 aa1.47□□□□□ -2.17
RPL40AYIL148W GIS3Q12418 502 aa1.47□□□□□ -2.17
RPL40AYIL148W MSW1P04803 379 aa1.46□□□□□ -2.18
RPL40AYIL148W YPR170W-BP0C5R9 85 aa1.46□□□□□ -2.18
RPL40AYIL148W SCO1P23833 295 aa1.46□□□□□ -2.18
RPL40AYIL148W MGM101P32787 269 aaKnown RBP1.46□□□□□ -2.18
RPL40AYIL148W PEX17P40155 199 aa1.46□□□□□ -2.18
RPL40AYIL148W YNL194CP40169 301 aa1.46□□□□□ -2.18
RPL40AYIL148W CIS3P47001 227 aa1.46□□□□□ -2.18
RPL40AYIL148W ADO1P47143 340 aaKnown RBP1.46□□□□□ -2.18
RPL40AYIL148W YJR149WP47177 404 aa1.46□□□□□ -2.18
RPL40AYIL148W ALG13P53178 202 aa1.46□□□□□ -2.18
RPL40AYIL148W COS6P53344 381 aa1.46□□□□□ -2.18
RPL40AYIL148W YDR248CQ03786 193 aa1.46□□□□□ -2.18
RPL40AYIL148W MSA1Q08471 629 aa1.46□□□□□ -2.18
RPL40AYIL148W NIP7Q08962 181 aaKnown RBP1.46□□□□□ -2.18
RPL40AYIL148W VPS68Q12016 184 aa1.46□□□□□ -2.18
RPL40AYIL148W YRA1Q12159 226 aaKnown RBP1.46□□□□□ -2.18
RPL40AYIL148W CDC28P00546 298 aaKnown RBP1.45□□□□□ -2.18
RPL40AYIL148W ATG22P25568 528 aa1.45□□□□□ -2.18
RPL40AYIL148W SIP3P38717 1229 aa1.45□□□□□ -2.18
RPL40AYIL148W TRM5P38793 499 aa1.45□□□□□ -2.18
RPL40AYIL148W AST2P39945 430 aaKnown RBP1.45□□□□□ -2.18
RPL40AYIL148W RMD6P39975 231 aa1.45□□□□□ -2.18
RPL40AYIL148W RSM25P40496 264 aa1.45□□□□□ -2.18
RPL40AYIL148W IRC18P47056 224 aa1.45□□□□□ -2.18
RPL40AYIL148W YJR146WP47174 117 aa1.45□□□□□ -2.18
RPL40AYIL148W YGR219WP53307 113 aa1.45□□□□□ -2.18
RPL40AYIL148W YKL183C-AQ3E765 70 aa1.45□□□□□ -2.18
RPL40AYIL148W CDC36P06100 191 aaPredicted RBP1.44□□□□□ -2.18
RPL40AYIL148W CDC33P07260 213 aaKnown RBP1.44□□□□□ -2.18
RPL40AYIL148W GCN3P14741 305 aa1.44□□□□□ -2.18
RPL40AYIL148W DBF2P22204 572 aa1.44□□□□□ -2.18
RPL40AYIL148W APS1P35181 156 aa1.44□□□□□ -2.18
RPL40AYIL148W URA8P38627 578 aaPredicted RBP1.44□□□□□ -2.18
RPL40AYIL148W RTC3P38804 111 aaPredicted RBP1.44□□□□□ -2.18
RPL40AYIL148W RFC4P40339 323 aaKnown RBP1.44□□□□□ -2.18
RPL40AYIL148W FAR7P43592 221 aa1.44□□□□□ -2.18
RPL40AYIL148W DID2P69771 204 aa1.44□□□□□ -2.18
RPL40AYIL148W SNZ1Q03148 297 aa1.44□□□□□ -2.18
RPL40AYIL148W MRPS17Q03246 237 aaPredicted RBP1.44□□□□□ -2.18
RPL40AYIL148W MDM32Q12171 622 aa1.44□□□□□ -2.18
RPL40AYIL148W CDC8P00572 216 aa1.43□□□□□ -2.18
RPL40AYIL148W ARG80P07249 177 aa1.43□□□□□ -2.18
RPL40AYIL148W FBA1P14540 359 aaKnown RBP1.43□□□□□ -2.18
RPL40AYIL148W CBF1P17106 351 aa1.43□□□□□ -2.18
RPL40AYIL148W MRPS28P21771 286 aa1.43□□□□□ -2.18
RPL40AYIL148W YOR062CP36025 268 aa1.43□□□□□ -2.18
RPL40AYIL148W MRPL28P36527 147 aa1.43□□□□□ -2.18
RPL40AYIL148W ECM33P38248 429 aaKnown RBP1.43□□□□□ -2.18
RPL40AYIL148W ERG25P53045 309 aa1.43□□□□□ -2.18
RPL40AYIL148W CAB4P53332 305 aa1.43□□□□□ -2.18
RPL40AYIL148W CUS2P53830 285 aaPredicted RBP1.43□□□□□ -2.18
RPL40AYIL148W LPP1Q04396 274 aa1.43□□□□□ -2.18
RPL40AYIL148W HTB1P02293 131 aaKnown RBP1.42□□□□□ -2.18
RPL40AYIL148W HTB2P02294 131 aa1.42□□□□□ -2.18
RPL40AYIL148W RPL25P04456 142 aaKnown RBP1.42□□□□□ -2.18
RPL40AYIL148W MATALPHA2P0CY08 210 aa1.42□□□□□ -2.18
RPL40AYIL148W HMLALPHA2P0CY09 210 aa1.42□□□□□ -2.18
RPL40AYIL148W PEX4P29340 183 aa1.42□□□□□ -2.18
RPL40AYIL148W MDH3P32419 343 aaKnown RBP RIP-Chip data1.42□□□□□ -2.18not detected
RPL40AYIL148W ERV15P38312 142 aa1.42□□□□□ -2.18
RPL40AYIL148W GRE3P38715 327 aaKnown RBP RIP-Chip data1.42□□□□□ -2.18not detected
RPL40AYIL148W IKI1P38874 309 aa1.42□□□□□ -2.18
RPL40AYIL148W VTC1P40046 129 aaRIP-Chip data1.42□□□□□ -2.18not detected
RPL40AYIL148W RPA43P46669 326 aa1.42□□□□□ -2.18
RPL40AYIL148W CWC23P52868 283 aaPredicted RBP1.42□□□□□ -2.18
RPL40AYIL148W MGA1P53050 456 aa1.42□□□□□ -2.18
RPL40AYIL148W TOS8P53147 276 aa1.42□□□□□ -2.18
RPL40AYIL148W PDR17P53844 350 aa1.42□□□□□ -2.18
RPL40AYIL148W GET4Q12125 312 aa1.42□□□□□ -2.18
RPL40AYIL148W TDA8Q6B2U8 126 aa1.42□□□□□ -2.18
RPL40AYIL148W RPL27AP0C2H6 136 aaKnown RBP1.41□□□□□ -2.18
RPL40AYIL148W RPL27BP0C2H7 136 aaKnown RBP1.41□□□□□ -2.18
RPL40AYIL148W OAC1P32332 324 aa1.41□□□□□ -2.18
RPL40AYIL148W PTM1P32857 523 aa1.41□□□□□ -2.18
RPL40AYIL148W PRX1P34227 261 aaKnown RBP1.41□□□□□ -2.18
RPL40AYIL148W SRY1P36007 326 aa1.41□□□□□ -2.18
RPL40AYIL148W POP4P38336 279 aa1.41□□□□□ -2.18
RPL40AYIL148W AIF1P52923 378 aa1.41□□□□□ -2.18
RPL40AYIL148W DAD3P69850 94 aa1.41□□□□□ -2.18
RPL40AYIL148W GAS3Q03655 524 aa1.41□□□□□ -2.18
RPL40AYIL148W CGI121Q03705 181 aaKnown RBP1.41□□□□□ -2.18
RPL40AYIL148W NEJ1Q06148 342 aa1.41□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 169.4 ms