RNA–Protein interactions for RNA: YHR065C

RRP3, Transcript of Protein involved in rRNA processing, yeast

Gene RRP3, Length 1,506 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRP3	YHR065C	PRM4	Q12498	284 aa		4.08	□□□□□ -1.76
RRP3	YHR065C	MEC1	P38111	2368 aa		4.08	□□□□□ -1.76
RRP3	YHR065C	YCR101C	P25607	182 aa		4.07	□□□□□ -1.76
RRP3	YHR065C	PEX4	P29340	183 aa		4.07	□□□□□ -1.76
RRP3	YHR065C	TRR1	P29509	319 aa	Known RBP	4.07	□□□□□ -1.76
RRP3	YHR065C	MTC7	P32633	139 aa		4.07	□□□□□ -1.76
RRP3	YHR065C	VAM7	P32912	316 aa		4.07	□□□□□ -1.76
RRP3	YHR065C	YKL063C	P35725	167 aa		4.07	□□□□□ -1.76
RRP3	YHR065C	PAN3	P36102	679 aa	Predicted RBP	4.07	□□□□□ -1.76
RRP3	YHR065C	SEN34	P39707	275 aa		4.07	□□□□□ -1.76
RRP3	YHR065C	PTI1	P39927	425 aa	Predicted RBP	4.07	□□□□□ -1.76
RRP3	YHR065C	YND1	P40009	630 aa		4.07	□□□□□ -1.76
RRP3	YHR065C	SWM2	P40342	146 aa		4.07	□□□□□ -1.76
RRP3	YHR065C	ATF1	P40353	525 aa		4.07	□□□□□ -1.76
RRP3	YHR065C	SSN8	P47821	323 aa		4.07	□□□□□ -1.76
RRP3	YHR065C	SIP18	P50263	79 aa		4.07	□□□□□ -1.76
RRP3	YHR065C	YIP5	P53108	310 aa		4.07	□□□□□ -1.76
RRP3	YHR065C	ORM1	P53224	222 aa		4.07	□□□□□ -1.76
RRP3	YHR065C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
RRP3	YHR065C	YML018C	Q03730	393 aa		4.07	□□□□□ -1.76
RRP3	YHR065C	PLP1	Q04004	230 aa		4.07	□□□□□ -1.76
RRP3	YHR065C	SYM1	Q06563	197 aa		4.07	□□□□□ -1.76
RRP3	YHR065C	FIT3	Q08907	204 aa		4.07	□□□□□ -1.76
RRP3	YHR065C	COX17	Q12287	69 aa		4.07	□□□□□ -1.76
RRP3	YHR065C	ERP4	Q12450	207 aa		4.07	□□□□□ -1.76
RRP3	YHR065C	ARO3	P14843	370 aa	Known RBP	4.06	□□□□□ -1.76
RRP3	YHR065C	SAG1	P20840	650 aa		4.06	□□□□□ -1.76
RRP3	YHR065C	ACB1	P31787	87 aa		4.06	□□□□□ -1.76
RRP3	YHR065C	ERG3	P32353	365 aa		4.06	□□□□□ -1.76
RRP3	YHR065C	CLB6	P32943	380 aa		4.06	□□□□□ -1.76
RRP3	YHR065C	MCH2	P36032	473 aa		4.06	□□□□□ -1.76
RRP3	YHR065C	YPC1	P38298	316 aa		4.06	□□□□□ -1.76
RRP3	YHR065C	YIL029C	P40538	142 aa		4.06	□□□□□ -1.76
RRP3	YHR065C	GWT1	P47026	490 aa		4.06	□□□□□ -1.76
RRP3	YHR065C	ECM27	P47144	725 aa		4.06	□□□□□ -1.76
RRP3	YHR065C	UFD1	P53044	361 aa		4.06	□□□□□ -1.76
RRP3	YHR065C	ACS1	Q01574	713 aa		4.06	□□□□□ -1.76
RRP3	YHR065C	YPR098C	Q06089	161 aa		4.06	□□□□□ -1.76
RRP3	YHR065C	PIN3	Q06449	215 aa		4.06	□□□□□ -1.76
RRP3	YHR065C	YNG1	Q08465	219 aa		4.06	□□□□□ -1.76
RRP3	YHR065C	RRS1	Q08746	203 aa	Known RBP	4.06	□□□□□ -1.76
RRP3	YHR065C	HUT1	Q12520	339 aa		4.06	□□□□□ -1.76
RRP3	YHR065C	FOL3	Q12676	427 aa	Predicted RBP	4.06	□□□□□ -1.76
RRP3	YHR065C	IPP1	P00817	287 aa	Known RBP	4.05	□□□□□ -1.76
RRP3	YHR065C	GAL1	P04385	528 aa		4.05	□□□□□ -1.76
RRP3	YHR065C	PET122	P10355	254 aa		4.05	□□□□□ -1.76
RRP3	YHR065C	CKS1	P20486	150 aa	Known RBP	4.05	□□□□□ -1.76
RRP3	YHR065C	ARO9	P38840	513 aa	Predicted RBP	4.05	□□□□□ -1.76
RRP3	YHR065C	GPI16	P38875	610 aa		4.05	□□□□□ -1.76
RRP3	YHR065C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	RIP-Chip
RRP3	YHR065C	OST1	P41543	476 aa	Known RBP	4.05	□□□□□ -1.76
RRP3	YHR065C	NIF3	P53081	288 aa		4.05	□□□□□ -1.76
RRP3	YHR065C	ALG9	P53868	555 aa	Known RBP	4.05	□□□□□ -1.76
RRP3	YHR065C	PRM15	Q03262	622 aa		4.05	□□□□□ -1.76
RRP3	YHR065C	YDR248C	Q03786	193 aa		4.05	□□□□□ -1.76
RRP3	YHR065C	CRR1	Q05790	422 aa		4.05	□□□□□ -1.76
RRP3	YHR065C	YOR186W	Q08560	144 aa		4.05	□□□□□ -1.76
RRP3	YHR065C	SCP1	Q08873	200 aa		4.05	□□□□□ -1.76
RRP3	YHR065C	RTR2	Q12378	196 aa		4.05	□□□□□ -1.76
RRP3	YHR065C	RPL25	P04456	142 aa	Known RBP	4.05	□□□□□ -1.76
RRP3	YHR065C	MSI1	P13712	422 aa		4.05	□□□□□ -1.76
RRP3	YHR065C	MAK32	P23060	363 aa		4.05	□□□□□ -1.76
RRP3	YHR065C	MIR1	P23641	311 aa	Known RBP	4.05	□□□□□ -1.76
RRP3	YHR065C	SUA5	P32579	426 aa		4.05	□□□□□ -1.76
RRP3	YHR065C	NAT2	P37293	288 aa		4.05	□□□□□ -1.76
RRP3	YHR065C	POP8	P38208	133 aa		4.05	□□□□□ -1.76
RRP3	YHR065C	FAT1	P38225	669 aa		4.05	□□□□□ -1.76
RRP3	YHR065C	PRS2	P38620	318 aa	Known RBP	4.05	□□□□□ -1.76
RRP3	YHR065C	LAG1	P38703	411 aa		4.05	□□□□□ -1.76
RRP3	YHR065C	YHL037C	P38733	133 aa		4.05	□□□□□ -1.76
RRP3	YHR065C	YER079W	P40052	210 aa	Known RBP	4.05	□□□□□ -1.76
RRP3	YHR065C	YER137C	P40083	148 aa	Known RBP	4.05	□□□□□ -1.76
RRP3	YHR065C	PIG2	P40187	538 aa		4.05	□□□□□ -1.76
RRP3	YHR065C	CCS1	P40202	249 aa	Known RBP	4.05	□□□□□ -1.76
RRP3	YHR065C	FLX1	P40464	311 aa		4.05	□□□□□ -1.76
RRP3	YHR065C	SYG1	P40528	902 aa		4.05	□□□□□ -1.76
RRP3	YHR065C	EGT2	P42835	1041 aa		4.05	□□□□□ -1.76
RRP3	YHR065C	YJR011C	P47086	261 aa	Predicted RBP	4.05	□□□□□ -1.76
RRP3	YHR065C	OKP1	P53298	406 aa		4.05	□□□□□ -1.76
RRP3	YHR065C	YDC1	Q02896	317 aa		4.05	□□□□□ -1.76
RRP3	YHR065C	API2	Q04413	109 aa		4.05	□□□□□ -1.76
RRP3	YHR065C	GRC3	Q07845	632 aa		4.05	□□□□□ -1.76
RRP3	YHR065C	TFB5	Q3E7C1	72 aa	Predicted RBP	4.05	□□□□□ -1.76
RRP3	YHR065C	UBA3	Q99344	299 aa		4.05	□□□□□ -1.76
RRP3	YHR065C	RPI1	P23250	407 aa	Known RBP	4.04	□□□□□ -1.76
RRP3	YHR065C	OCH1	P31755	480 aa		4.04	□□□□□ -1.76
RRP3	YHR065C	GLC7	P32598	312 aa	Known RBP	4.04	□□□□□ -1.76
RRP3	YHR065C	VMA8	P32610	256 aa	Known RBP	4.04	□□□□□ -1.76
RRP3	YHR065C	AGA2	P32781	87 aa		4.04	□□□□□ -1.76
RRP3	YHR065C	GEP4	P38812	185 aa		4.04	□□□□□ -1.76
RRP3	YHR065C	LNP1	P38878	278 aa		4.04	□□□□□ -1.76
RRP3	YHR065C	PHM8	P40025	321 aa		4.04	□□□□□ -1.76
RRP3	YHR065C	PRM5	P40476	318 aa		4.04	□□□□□ -1.76
RRP3	YHR065C	BMT5	P40493	336 aa		4.04	□□□□□ -1.76
RRP3	YHR065C	YGR210C	P42942	411 aa		4.04	□□□□□ -1.76
RRP3	YHR065C	MRX5	P47007	382 aa		4.04	□□□□□ -1.76
RRP3	YHR065C	SNX4	P47057	423 aa		4.04	□□□□□ -1.76
RRP3	YHR065C	CAB5	Q03941	241 aa		4.04	□□□□□ -1.76
RRP3	YHR065C	YMR254C	Q04838	102 aa		4.04	□□□□□ -1.76
RRP3	YHR065C	YDR286C	Q05530	114 aa		4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 26.1 ms