RNA–Protein interactions for RNA: YHR012W

VPS29, Transcript of Subunit of the membrane-associated retromer complex, yeastyeast

Gene VPS29, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS29YHR012W RPL21AQ02753 160 aaKnown RBP3.97□□□□□ -1.77
VPS29YHR012W YOR029WQ12243 111 aa3.97□□□□□ -1.77
VPS29YHR012W RPL21BQ12672 160 aaKnown RBP3.97□□□□□ -1.77
VPS29YHR012W YLR358CO13565 187 aa3.96□□□□□ -1.78
VPS29YHR012W QCR7P00128 127 aa3.96□□□□□ -1.78
VPS29YHR012W HEM13P11353 328 aaKnown RBP3.96□□□□□ -1.78
VPS29YHR012W MDH1P17505 334 aaKnown RBP RIP-Chip data3.96□□□□□ -1.78not detected
VPS29YHR012W RFA3P26755 122 aaKnown RBP3.96□□□□□ -1.78
VPS29YHR012W SFK1P35735 353 aa3.96□□□□□ -1.78
VPS29YHR012W UMP1P38293 148 aa3.96□□□□□ -1.78
VPS29YHR012W NVJ1P38881 321 aa3.96□□□□□ -1.78
VPS29YHR012W YMR166CQ03829 368 aa3.96□□□□□ -1.78
VPS29YHR012W SPG4Q04438 115 aa3.96□□□□□ -1.78
VPS29YHR012W YLR283WQ05867 314 aa3.96□□□□□ -1.78
VPS29YHR012W NEJ1Q06148 342 aa3.96□□□□□ -1.78
VPS29YHR012W VAM3Q12241 283 aa3.96□□□□□ -1.78
VPS29YHR012W MPD1Q12404 318 aaKnown RBP3.96□□□□□ -1.78
VPS29YHR012W PET122P10355 254 aa3.95□□□□□ -1.78
VPS29YHR012W CDC34P14682 295 aa3.95□□□□□ -1.78
VPS29YHR012W ATG22P25568 528 aa3.95□□□□□ -1.78
VPS29YHR012W MIG1P27705 504 aa3.95□□□□□ -1.78
VPS29YHR012W ARO7P32178 256 aa3.95□□□□□ -1.78
VPS29YHR012W PAU2P32612 120 aa3.95□□□□□ -1.78
VPS29YHR012W ZRT3P34240 503 aa3.95□□□□□ -1.78
VPS29YHR012W YKL075CP36083 450 aa3.95□□□□□ -1.78
VPS29YHR012W NTC20P38302 140 aaPredicted RBP3.95□□□□□ -1.78
VPS29YHR012W CUE1P38428 203 aa3.95□□□□□ -1.78
VPS29YHR012W AGE2P40529 298 aa3.95□□□□□ -1.78
VPS29YHR012W YJR056CP47115 236 aa3.95□□□□□ -1.78
VPS29YHR012W HSK3P69852 69 aa3.95□□□□□ -1.78
VPS29YHR012W GRX5Q02784 150 aa3.95□□□□□ -1.78
VPS29YHR012W NOC4Q06512 552 aaPredicted RBP3.95□□□□□ -1.78
VPS29YHR012W YGK3Q12222 375 aaPredicted RBP3.95□□□□□ -1.78
VPS29YHR012W ORT1Q12375 292 aa3.95□□□□□ -1.78
VPS29YHR012W HUT1Q12520 339 aa3.95□□□□□ -1.78
VPS29YHR012W REP2P03872 296 aa3.94□□□□□ -1.78
VPS29YHR012W PRE7P23724 241 aaKnown RBP3.94□□□□□ -1.78
VPS29YHR012W PEX4P29340 183 aa3.94□□□□□ -1.78
VPS29YHR012W RPD3P32561 433 aa3.94□□□□□ -1.78
VPS29YHR012W RAD23P32628 398 aaKnown RBP3.94□□□□□ -1.78
VPS29YHR012W SEC66P33754 206 aa3.94□□□□□ -1.78
VPS29YHR012W YKL063CP35725 167 aa3.94□□□□□ -1.78
VPS29YHR012W SRY1P36007 326 aa3.94□□□□□ -1.78
VPS29YHR012W MRPL36P36531 177 aa3.94□□□□□ -1.78
VPS29YHR012W SMB1P40018 196 aaKnown RBP3.94□□□□□ -1.78
VPS29YHR012W DDI1P40087 428 aa3.94□□□□□ -1.78
VPS29YHR012W AIM20P40451 204 aa3.94□□□□□ -1.78
VPS29YHR012W LYS20P48570 428 aaKnown RBP3.94□□□□□ -1.78
VPS29YHR012W HNT2P49775 206 aa3.94□□□□□ -1.78
VPS29YHR012W TMA10Q06177 86 aa3.94□□□□□ -1.78
VPS29YHR012W LYS21Q12122 440 aaKnown RBP3.94□□□□□ -1.78
VPS29YHR012W GCN4P03069 281 aa3.93□□□□□ -1.78
VPS29YHR012W ADE8P04161 214 aa3.93□□□□□ -1.78
VPS29YHR012W PET18P25362 215 aa3.93□□□□□ -1.78
VPS29YHR012W YBL010CP32788 280 aa3.93□□□□□ -1.78
VPS29YHR012W SHE2P36068 246 aaKnown RBP RIP-Chip data3.93□□□□□ -1.78not detected
VPS29YHR012W PMU1P36069 295 aa3.93□□□□□ -1.78
VPS29YHR012W PRS4P38063 326 aaPredicted RBP3.93□□□□□ -1.78
VPS29YHR012W FMP23P38231 175 aa3.93□□□□□ -1.78
VPS29YHR012W YBR137WP38276 179 aa3.93□□□□□ -1.78
VPS29YHR012W JLP2P40206 208 aa3.93□□□□□ -1.78
VPS29YHR012W BMT5P40493 336 aa3.93□□□□□ -1.78
VPS29YHR012W SYS1P41544 203 aa3.93□□□□□ -1.78
VPS29YHR012W CTF19Q02732 369 aa3.93□□□□□ -1.78
VPS29YHR012W STD1Q02794 444 aa3.93□□□□□ -1.78
VPS29YHR012W MIX17Q03667 156 aa3.93□□□□□ -1.78
VPS29YHR012W MGR3Q04472 501 aa3.93□□□□□ -1.78
VPS29YHR012W YMR252CQ04814 134 aa3.93□□□□□ -1.78
VPS29YHR012W DAL4Q04895 635 aa3.93□□□□□ -1.78
VPS29YHR012W GPN3Q06543 272 aa3.93□□□□□ -1.78
VPS29YHR012W MDM36Q06820 579 aa3.93□□□□□ -1.78
VPS29YHR012W RBD2Q12270 262 aa3.93□□□□□ -1.78
VPS29YHR012W DGK1Q12382 290 aa3.93□□□□□ -1.78
VPS29YHR012W YLR099W-AQ3E798 87 aa3.93□□□□□ -1.78
VPS29YHR012W RPN13O13563 156 aa3.92□□□□□ -1.78
VPS29YHR012W YCR061WP25639 631 aa3.92□□□□□ -1.78
VPS29YHR012W ERG2P32352 222 aa3.92□□□□□ -1.78
VPS29YHR012W MTC7P32633 139 aa3.92□□□□□ -1.78
VPS29YHR012W RIB7P33312 244 aa3.92□□□□□ -1.78
VPS29YHR012W BUD8P41698 603 aa3.92□□□□□ -1.78
VPS29YHR012W YJR120WP47157 116 aa3.92□□□□□ -1.78
VPS29YHR012W MAK3Q03503 176 aa3.92□□□□□ -1.78
VPS29YHR012W YMR130WQ04223 302 aa3.92□□□□□ -1.78
VPS29YHR012W HNT1Q04344 158 aaKnown RBP3.92□□□□□ -1.78
VPS29YHR012W HLR1Q04429 423 aa3.92□□□□□ -1.78
VPS29YHR012W FIT1Q04433 528 aa3.92□□□□□ -1.78
VPS29YHR012W NMA1Q06178 401 aaKnown RBP3.92□□□□□ -1.78
VPS29YHR012W FRE5Q08908 694 aa3.92□□□□□ -1.78
VPS29YHR012W MRPL23Q12487 163 aaPredicted RBP3.92□□□□□ -1.78
VPS29YHR012W DCP1Q12517 231 aaPredicted RBP3.92□□□□□ -1.78
VPS29YHR012W COX2P00410 251 aa3.91□□□□□ -1.78
VPS29YHR012W PET54P10834 293 aa3.91□□□□□ -1.78
VPS29YHR012W FUS3P16892 353 aaKnown RBP3.91□□□□□ -1.78
VPS29YHR012W RPL24BP24000 155 aaKnown RBP3.91□□□□□ -1.78
VPS29YHR012W IFM1P25038 676 aa3.91□□□□□ -1.78
VPS29YHR012W ERG24P32462 438 aaKnown RBP3.91□□□□□ -1.78
VPS29YHR012W PRM5P40476 318 aa3.91□□□□□ -1.78
VPS29YHR012W YJL213WP40896 331 aa3.91□□□□□ -1.78
VPS29YHR012W BNA6P43619 295 aa3.91□□□□□ -1.78
VPS29YHR012W YAE1P47118 141 aaPredicted RBP3.91□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms