RNA–Protein interactions for RNA: YHL002W

HSE1, Transcript of Subunit of the endosomal Vps27p-Hse1p complex, yeastyeast

Gene HSE1, Length 1,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSE1YHL002W MRPS17Q03246 237 aaPredicted RBP1.79□□□□□ -2.12
HSE1YHL002W YLR179CQ06252 201 aaKnown RBP1.79□□□□□ -2.12
HSE1YHL002W JLP1Q12358 412 aa1.79□□□□□ -2.12
HSE1YHL002W Q0255P03881 472 aa1.78□□□□□ -2.12
HSE1YHL002W FBA1P14540 359 aaKnown RBP1.78□□□□□ -2.12
HSE1YHL002W URA6P15700 204 aa1.78□□□□□ -2.12
HSE1YHL002W CBT1P36038 271 aaPredicted RBP1.78□□□□□ -2.12
HSE1YHL002W YNL194CP40169 301 aa1.78□□□□□ -2.12
HSE1YHL002W RAD17P48581 401 aa1.78□□□□□ -2.12
HSE1YHL002W NUP57P48837 541 aa1.78□□□□□ -2.12
HSE1YHL002W TOS8P53147 276 aa1.78□□□□□ -2.12
HSE1YHL002W GTR2P53290 341 aa1.78□□□□□ -2.12
HSE1YHL002W DID2P69771 204 aa1.78□□□□□ -2.12
HSE1YHL002W YMR226CQ05016 267 aaKnown RBP1.78□□□□□ -2.12
HSE1YHL002W INM2Q05533 292 aa1.78□□□□□ -2.12
HSE1YHL002W SSQ1Q05931 657 aaPredicted RBP1.78□□□□□ -2.12
HSE1YHL002W HEM25Q07534 307 aa1.78□□□□□ -2.12
HSE1YHL002W YLR030WQ07967 263 aa1.78□□□□□ -2.12
HSE1YHL002W ATO3Q12359 275 aa1.78□□□□□ -2.12
HSE1YHL002W LSO2Q3E772 92 aaKnown RBP1.78□□□□□ -2.12
HSE1YHL002W YPL229WQ99395 206 aa1.78□□□□□ -2.12
HSE1YHL002W HTL1Q9URQ5 78 aa1.78□□□□□ -2.12
HSE1YHL002W SIR4P11978 1358 aa1.78□□□□□ -2.12
HSE1YHL002W IPP1P00817 287 aaKnown RBP1.77□□□□□ -2.13
HSE1YHL002W RPL28P02406 149 aaKnown RBP1.77□□□□□ -2.13
HSE1YHL002W CDC36P06100 191 aaPredicted RBP1.77□□□□□ -2.13
HSE1YHL002W ERG24P32462 438 aaKnown RBP1.77□□□□□ -2.13
HSE1YHL002W YPT52P36018 234 aaKnown RBP1.77□□□□□ -2.13
HSE1YHL002W RFC4P40339 323 aaKnown RBP1.77□□□□□ -2.13
HSE1YHL002W ADO1P47143 340 aaKnown RBP1.77□□□□□ -2.13
HSE1YHL002W YGL159WP53110 370 aa1.77□□□□□ -2.13
HSE1YHL002W YGR026WP53217 278 aa1.77□□□□□ -2.13
HSE1YHL002W CUS2P53830 285 aaPredicted RBP1.77□□□□□ -2.13
HSE1YHL002W YMR279CQ03263 540 aa1.77□□□□□ -2.13
HSE1YHL002W GET4Q12125 312 aa1.77□□□□□ -2.13
HSE1YHL002W YOR020W-AQ3E824 90 aa1.77□□□□□ -2.13
HSE1YHL002W DRS2P39524 1355 aa1.76□□□□□ -2.13
HSE1YHL002W RAS2P01120 322 aaKnown RBP1.76□□□□□ -2.13
HSE1YHL002W CDC7P06243 507 aa1.76□□□□□ -2.13
HSE1YHL002W SCL1P21243 252 aaKnown RBP1.76□□□□□ -2.13
HSE1YHL002W TAF14P35189 244 aa1.76□□□□□ -2.13
HSE1YHL002W RPF1P38805 295 aaKnown RBP1.76□□□□□ -2.13
HSE1YHL002W YHR125WP38831 101 aa1.76□□□□□ -2.13
HSE1YHL002W CAT5P41735 233 aa1.76□□□□□ -2.13
HSE1YHL002W SMD3P43321 101 aaKnown RBP1.76□□□□□ -2.13
HSE1YHL002W RPA43P46669 326 aa1.76□□□□□ -2.13
HSE1YHL002W PRM8P53174 237 aa1.76□□□□□ -2.13
HSE1YHL002W ABF2Q02486 183 aa1.76□□□□□ -2.13
HSE1YHL002W MSA1Q08471 629 aa1.76□□□□□ -2.13
HSE1YHL002W YPL257WQ08974 193 aa1.76□□□□□ -2.13
HSE1YHL002W COX5AP00424 153 aa1.75□□□□□ -2.13
HSE1YHL002W DSF1P0CX08 502 aa1.75□□□□□ -2.13
HSE1YHL002W YNR073CP0CX09 502 aa1.75□□□□□ -2.13
HSE1YHL002W IDH1P28834 360 aaKnown RBP RIP-Chip data1.75□□□□□ -2.13not detected
HSE1YHL002W PEX4P29340 183 aa1.75□□□□□ -2.13
HSE1YHL002W APS1P35181 156 aa1.75□□□□□ -2.13
HSE1YHL002W SRY1P36007 326 aa1.75□□□□□ -2.13
HSE1YHL002W DOG1P38774 246 aa1.75□□□□□ -2.13
HSE1YHL002W IKI1P38874 309 aa1.75□□□□□ -2.13
HSE1YHL002W FIS1P40515 155 aa1.75□□□□□ -2.13
HSE1YHL002W IRC18P47056 224 aa1.75□□□□□ -2.13
HSE1YHL002W BXI1P48558 297 aa1.75□□□□□ -2.13
HSE1YHL002W ALG13P53178 202 aa1.75□□□□□ -2.13
HSE1YHL002W ERV29P53337 310 aa1.75□□□□□ -2.13
HSE1YHL002W MRPS8Q03799 155 aa1.75□□□□□ -2.13
HSE1YHL002W YML096WQ04489 525 aa1.75□□□□□ -2.13
HSE1YHL002W AKR2Q12013 749 aa1.75□□□□□ -2.13
HSE1YHL002W YDR157WA0A023PZE8 133 aa1.74□□□□□ -2.13
HSE1YHL002W CDC28P00546 298 aaKnown RBP1.74□□□□□ -2.13
HSE1YHL002W RFA3P26755 122 aaKnown RBP1.74□□□□□ -2.13
HSE1YHL002W MGM101P32787 269 aaKnown RBP1.74□□□□□ -2.13
HSE1YHL002W VMA11P32842 164 aa1.74□□□□□ -2.13
HSE1YHL002W MSA2P36157 363 aa1.74□□□□□ -2.13
HSE1YHL002W YAR068WP39564 161 aa1.74□□□□□ -2.13
HSE1YHL002W FAR7P43592 221 aa1.74□□□□□ -2.13
HSE1YHL002W YDR248CQ03786 193 aa1.74□□□□□ -2.13
HSE1YHL002W ABP140Q08641 628 aaKnown RBP1.74□□□□□ -2.13
HSE1YHL002W NIP7Q08962 181 aaKnown RBP1.74□□□□□ -2.13
HSE1YHL002W YHR139C-AO13536 103 aa1.73□□□□□ -2.13
HSE1YHL002W HTB1P02293 131 aaKnown RBP1.73□□□□□ -2.13
HSE1YHL002W HTB2P02294 131 aa1.73□□□□□ -2.13
HSE1YHL002W YPK2P18961 677 aa1.73□□□□□ -2.13
HSE1YHL002W GET1P53192 235 aa1.73□□□□□ -2.13
HSE1YHL002W YMD8Q03697 442 aa1.73□□□□□ -2.13
HSE1YHL002W YRA1Q12159 226 aaKnown RBP1.73□□□□□ -2.13
HSE1YHL002W CHD1P32657 1468 aa1.73□□□□□ -2.13
HSE1YHL002W SEC4P07560 215 aaKnown RBP1.72□□□□□ -2.13
HSE1YHL002W FCY2P17064 533 aa1.72□□□□□ -2.13
HSE1YHL002W DBF2P22204 572 aa1.72□□□□□ -2.13
HSE1YHL002W TCA17P32613 152 aa1.72□□□□□ -2.13
HSE1YHL002W YCR087C-AP37263 153 aa1.72□□□□□ -2.13
HSE1YHL002W ECM33P38248 429 aaKnown RBP1.72□□□□□ -2.13
HSE1YHL002W DOG2P38773 246 aa1.72□□□□□ -2.13
HSE1YHL002W CIS3P47001 227 aa1.72□□□□□ -2.13
HSE1YHL002W PDR17P53844 350 aa1.72□□□□□ -2.13
HSE1YHL002W GIM3P53900 129 aa1.72□□□□□ -2.13
HSE1YHL002W SAC3P46674 1301 aa1.72□□□□□ -2.13
HSE1YHL002W TUS1Q06412 1307 aa1.72□□□□□ -2.13
HSE1YHL002W YOL162WP0CF19 215 aa1.72□□□□□ -2.13
HSE1YHL002W MATALPHA2P0CY08 210 aa1.72□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms