RNA–Protein interactions for RNA: YFL047W

RGD2, Transcript of GTPase-activating protein (RhoGAP) for Cdc42p and Rho5p, yeastyeast

Gene RGD2, Length 2,145 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RGD2YFL047W HOL1P53389 586 aa5.84□□□□□ -1.47
RGD2YFL047W YIF1P53845 314 aaKnown RBP5.84□□□□□ -1.47
RGD2YFL047W HHT1P61830 136 aa5.84□□□□□ -1.47
RGD2YFL047W YMR279CQ03263 540 aa5.84□□□□□ -1.47
RGD2YFL047W TMA23Q03525 211 aa5.84□□□□□ -1.47
RGD2YFL047W MED4Q12343 284 aa5.84□□□□□ -1.47
RGD2YFL047W CDC28P00546 298 aaKnown RBP5.84□□□□□ -1.47
RGD2YFL047W NTF2P33331 125 aaKnown RBP5.84□□□□□ -1.47
RGD2YFL047W SHG1P38337 142 aa5.84□□□□□ -1.47
RGD2YFL047W SHO1P40073 367 aa5.84□□□□□ -1.47
RGD2YFL047W IKS1P47042 667 aa5.84□□□□□ -1.47
RGD2YFL047W MSY1P48527 492 aa5.84□□□□□ -1.47
RGD2YFL047W MRPS17Q03246 237 aaPredicted RBP5.84□□□□□ -1.47
RGD2YFL047W CRR1Q05790 422 aa5.84□□□□□ -1.47
RGD2YFL047W GRE1Q08969 168 aa5.84□□□□□ -1.47
RGD2YFL047W HUT1Q12520 339 aa5.84□□□□□ -1.47
RGD2YFL047W VMA3P25515 160 aa5.83□□□□□ -1.48
RGD2YFL047W GLC7P32598 312 aaKnown RBP5.83□□□□□ -1.48
RGD2YFL047W MNS1P32906 549 aa5.83□□□□□ -1.48
RGD2YFL047W YKR073CP36153 106 aa5.83□□□□□ -1.48
RGD2YFL047W SDH4P37298 181 aa5.83□□□□□ -1.48
RGD2YFL047W POP2P39008 433 aa5.83□□□□□ -1.48
RGD2YFL047W MID1P41821 548 aa5.83□□□□□ -1.48
RGD2YFL047W GNA1P43577 159 aaPredicted RBP5.83□□□□□ -1.48
RGD2YFL047W PGU1P47180 361 aa5.83□□□□□ -1.48
RGD2YFL047W TIM21P53220 239 aa5.83□□□□□ -1.48
RGD2YFL047W TEX1P53851 422 aaKnown RBP5.83□□□□□ -1.48
RGD2YFL047W YPL039WQ03080 316 aa5.83□□□□□ -1.48
RGD2YFL047W ASM4Q05166 528 aa5.83□□□□□ -1.48
RGD2YFL047W COA2Q3E823 68 aa5.83□□□□□ -1.48
RGD2YFL047W SPO7P18410 259 aa5.83□□□□□ -1.48
RGD2YFL047W OCH1P31755 480 aa5.83□□□□□ -1.48
RGD2YFL047W ERG2P32352 222 aa5.83□□□□□ -1.48
RGD2YFL047W SIP1P32578 815 aa5.83□□□□□ -1.48
RGD2YFL047W EDS1P38073 919 aa5.83□□□□□ -1.48
RGD2YFL047W RIB5P38145 238 aa5.83□□□□□ -1.48
RGD2YFL047W YBR013CP38215 129 aa5.83□□□□□ -1.48
RGD2YFL047W IRC24P40580 263 aa5.83□□□□□ -1.48
RGD2YFL047W YJL016WP47072 561 aa5.83□□□□□ -1.48
RGD2YFL047W ATG21Q02887 496 aa5.83□□□□□ -1.48
RGD2YFL047W YMR082CQ04276 118 aa5.83□□□□□ -1.48
RGD2YFL047W MRX9Q07349 420 aaKnown RBP5.83□□□□□ -1.48
RGD2YFL047W RAD28Q12021 506 aa5.83□□□□□ -1.48
RGD2YFL047W YOR015WQ12169 119 aa5.83□□□□□ -1.48
RGD2YFL047W COX1P00401 534 aa5.82□□□□□ -1.48
RGD2YFL047W RPL30P14120 105 aaKnown RBP5.82□□□□□ -1.48
RGD2YFL047W CKA1P15790 372 aa5.82□□□□□ -1.48
RGD2YFL047W POF1P25576 258 aa5.82□□□□□ -1.48
RGD2YFL047W PEX4P29340 183 aa5.82□□□□□ -1.48
RGD2YFL047W REC114P32841 428 aa5.82□□□□□ -1.48
RGD2YFL047W FLO5P38894 1075 aa5.82□□□□□ -1.48
RGD2YFL047W YJR012CP47087 207 aa5.82□□□□□ -1.48
RGD2YFL047W MAP1Q01662 387 aaKnown RBP RIP-Chip data5.82□□□□□ -1.48not detected
RGD2YFL047W CGI121Q03705 181 aaKnown RBP5.82□□□□□ -1.48
RGD2YFL047W MDM30Q05930 598 aa5.82□□□□□ -1.48
RGD2YFL047W TDA6Q06466 467 aa5.82□□□□□ -1.48
RGD2YFL047W LSO2Q3E772 92 aaKnown RBP5.82□□□□□ -1.48
RGD2YFL047W YLR365WQ7LIF2 110 aa5.82□□□□□ -1.48
RGD2YFL047W YMR084WA2P2R3 262 aa5.81□□□□□ -1.48
RGD2YFL047W ADH3P07246 375 aaKnown RBP5.81□□□□□ -1.48
RGD2YFL047W GDH1P07262 454 aaKnown RBP5.81□□□□□ -1.48
RGD2YFL047W MCM1P11746 286 aa5.81□□□□□ -1.48
RGD2YFL047W YCR025CP25352 136 aa5.81□□□□□ -1.48
RGD2YFL047W UTH1P36135 365 aa5.81□□□□□ -1.48
RGD2YFL047W TAX4P47030 604 aa5.81□□□□□ -1.48
RGD2YFL047W PCP1P53259 346 aa5.81□□□□□ -1.48
RGD2YFL047W YDR415CQ04033 374 aaPredicted RBP5.81□□□□□ -1.48
RGD2YFL047W GMC1Q04399 608 aa5.81□□□□□ -1.48
RGD2YFL047W SOF1P33750 489 aaKnown RBP5.81□□□□□ -1.48
RGD2YFL047W ERV15P38312 142 aa5.81□□□□□ -1.48
RGD2YFL047W YNR048WP53740 393 aa5.81□□□□□ -1.48
RGD2YFL047W RSM23Q01163 450 aa5.81□□□□□ -1.48
RGD2YFL047W YML053CQ04978 212 aa5.81□□□□□ -1.48
RGD2YFL047W AIM45Q12480 344 aaKnown RBP5.81□□□□□ -1.48
RGD2YFL047W CYR1P08678 2026 aaKnown RBP5.81□□□□□ -1.48
RGD2YFL047W YHR214C-DP0CX93 97 aa5.8□□□□□ -1.48
RGD2YFL047W MDH2P22133 377 aa5.8□□□□□ -1.48
RGD2YFL047W RPB7P34087 171 aa5.8□□□□□ -1.48
RGD2YFL047W SLM6P38343 150 aa5.8□□□□□ -1.48
RGD2YFL047W TOK1P40310 691 aa5.8□□□□□ -1.48
RGD2YFL047W REE1P40893 198 aa5.8□□□□□ -1.48
RGD2YFL047W CUP9P41817 306 aa5.8□□□□□ -1.48
RGD2YFL047W RPA34P47006 233 aaPredicted RBP5.8□□□□□ -1.48
RGD2YFL047W BNS1P50084 137 aa5.8□□□□□ -1.48
RGD2YFL047W SLX9P53251 210 aaPredicted RBP5.8□□□□□ -1.48
RGD2YFL047W YNR066CP53752 436 aa5.8□□□□□ -1.48
RGD2YFL047W DIG2Q03373 323 aaKnown RBP5.8□□□□□ -1.48
RGD2YFL047W HRI1Q05905 244 aaKnown RBP5.8□□□□□ -1.48
RGD2YFL047W DUG1P43616 481 aaKnown RBP5.8□□□□□ -1.48
RGD2YFL047W CGR1P53188 120 aa5.8□□□□□ -1.48
RGD2YFL047W YNL165WP53891 406 aa5.8□□□□□ -1.48
RGD2YFL047W HOF1Q05080 669 aa5.8□□□□□ -1.48
RGD2YFL047W YOR376WQ08900 122 aa5.8□□□□□ -1.48
RGD2YFL047W FLO9P39712 1322 aa5.79□□□□□ -1.48
RGD2YFL047W TDH3P00359 332 aaKnown RBP RIP-Chip data5.79□□□□□ -1.48not detected
RGD2YFL047W RPS16AP0CX51 143 aaKnown RBP5.79□□□□□ -1.48
RGD2YFL047W RPS16BP0CX52 143 aaKnown RBP5.79□□□□□ -1.48
RGD2YFL047W FRS1P15624 595 aaKnown RBP5.79□□□□□ -1.48
RGD2YFL047W YCR101CP25607 182 aa5.79□□□□□ -1.48
RGD2YFL047W LAC1P28496 418 aa5.79□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 27.2 ms