RNA–Protein interactions for RNA: YFL038C

YPT1, Transcript of Rab family GTPase, yeastyeast

Gene YPT1, Length 621 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol .

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT1YFL038C IRC24P40580 263 aa5.67□□□□□ -1.5
YPT1YFL038C MID1P41821 548 aa5.67□□□□□ -1.5
YPT1YFL038C YJL016WP47072 561 aa5.67□□□□□ -1.5
YPT1YFL038C SOL1P50278 321 aa5.67□□□□□ -1.5
YPT1YFL038C OCA1P50946 238 aaPredicted RBP5.67□□□□□ -1.5
YPT1YFL038C YIF1P53845 314 aaKnown RBP5.67□□□□□ -1.5
YPT1YFL038C VPS28Q02767 242 aa5.67□□□□□ -1.5
YPT1YFL038C SDC1Q03323 175 aa5.67□□□□□ -1.5
YPT1YFL038C USB1Q12208 290 aaKnown RBP5.67□□□□□ -1.5
YPT1YFL038C YLR365WQ7LIF2 110 aa5.67□□□□□ -1.5
YPT1YFL038C YPT1P01123 206 aaKnown RBP5.66□□□□□ -1.5
YPT1YFL038C TY1A-LR4P0C2I8 440 aaKnown RBP5.66□□□□□ -1.5
YPT1YFL038C TY1A-DR6P0CX70 440 aa5.66□□□□□ -1.5
YPT1YFL038C TY1A-ER1P0CX71 440 aa5.66□□□□□ -1.5
YPT1YFL038C TY1A-LR2P0CX72 440 aa5.66□□□□□ -1.5
YPT1YFL038C TY1A-PLP0CX73 440 aa5.66□□□□□ -1.5
YPT1YFL038C TY1A-JR1P0CX74 440 aa5.66□□□□□ -1.5
YPT1YFL038C TY1A-LR3P0CX75 440 aa5.66□□□□□ -1.5
YPT1YFL038C TY1A-ML2P0CX76 440 aa5.66□□□□□ -1.5
YPT1YFL038C MCM1P11746 286 aa5.66□□□□□ -1.5
YPT1YFL038C CKA1P15790 372 aa5.66□□□□□ -1.5
YPT1YFL038C MDH2P22133 377 aa5.66□□□□□ -1.5
YPT1YFL038C VMA3P25515 160 aa5.66□□□□□ -1.5
YPT1YFL038C YCR101CP25607 182 aa5.66□□□□□ -1.5
YPT1YFL038C RPA34P47006 233 aaPredicted RBP5.66□□□□□ -1.5
YPT1YFL038C YJR056CP47115 236 aa5.66□□□□□ -1.5
YPT1YFL038C SNO1Q03144 224 aa5.66□□□□□ -1.5
YPT1YFL038C MRPS17Q03246 237 aaPredicted RBP5.66□□□□□ -1.5
YPT1YFL038C DXO1Q06349 442 aa5.66□□□□□ -1.5
YPT1YFL038C AKR2Q12013 749 aa5.66□□□□□ -1.5
YPT1YFL038C TY1A-GR1Q12085 440 aa5.66□□□□□ -1.5
YPT1YFL038C HUT1Q12520 339 aa5.66□□□□□ -1.5
YPT1YFL038C COX19Q3E731 98 aa5.66□□□□□ -1.5
YPT1YFL038C TY1A-PR3Q6Q5H1 440 aaKnown RBP5.66□□□□□ -1.5
YPT1YFL038C TY1A-OLQ92392 440 aaKnown RBP5.66□□□□□ -1.5
YPT1YFL038C RPS16AP0CX51 143 aaKnown RBP5.65□□□□□ -1.5
YPT1YFL038C RPS16BP0CX52 143 aaKnown RBP5.65□□□□□ -1.5
YPT1YFL038C SED4P25365 1065 aa5.65□□□□□ -1.5
YPT1YFL038C OCH1P31755 480 aa5.65□□□□□ -1.5
YPT1YFL038C GLC7P32598 312 aaKnown RBP5.65□□□□□ -1.5
YPT1YFL038C SWD2P36104 329 aaPredicted RBP5.65□□□□□ -1.5
YPT1YFL038C FIG1P38224 298 aa5.65□□□□□ -1.5
YPT1YFL038C GTT1P40582 234 aa5.65□□□□□ -1.5
YPT1YFL038C YGR026WP53217 278 aa5.65□□□□□ -1.5
YPT1YFL038C HOL1P53389 586 aa5.65□□□□□ -1.5
YPT1YFL038C MRPL22P53881 309 aa5.65□□□□□ -1.5
YPT1YFL038C TMA23Q03525 211 aa5.65□□□□□ -1.5
YPT1YFL038C TRS23Q03784 219 aa5.65□□□□□ -1.5
YPT1YFL038C FIT1Q04433 528 aa5.65□□□□□ -1.5
YPT1YFL038C ASM4Q05166 528 aa5.65□□□□□ -1.5
YPT1YFL038C DCS1Q06151 350 aa5.65□□□□□ -1.5
YPT1YFL038C SPS4P09937 338 aa5.64□□□□□ -1.51
YPT1YFL038C APA2P22108 325 aa5.64□□□□□ -1.51
YPT1YFL038C SIP1P32578 815 aa5.64□□□□□ -1.51
YPT1YFL038C SHM2P37291 469 aaKnown RBP5.64□□□□□ -1.51
YPT1YFL038C ATG8P38182 117 aaRIP-Chip data5.64□□□□□ -1.51not detected
YPT1YFL038C ERV15P38312 142 aa5.64□□□□□ -1.51
YPT1YFL038C SLM6P38343 150 aa5.64□□□□□ -1.51
YPT1YFL038C CCS1P40202 249 aaKnown RBP5.64□□□□□ -1.51
YPT1YFL038C ATF1P40353 525 aa5.64□□□□□ -1.51
YPT1YFL038C AIR1P40507 360 aaKnown RBP5.64□□□□□ -1.51
YPT1YFL038C YJR012CP47087 207 aa5.64□□□□□ -1.51
YPT1YFL038C MOG1P47123 218 aa5.64□□□□□ -1.51
YPT1YFL038C SSN8P47821 323 aa5.64□□□□□ -1.51
YPT1YFL038C SLX9P53251 210 aaPredicted RBP5.64□□□□□ -1.51
YPT1YFL038C MEH1Q02205 184 aa5.64□□□□□ -1.51
YPT1YFL038C YMR253CQ04835 414 aa5.64□□□□□ -1.51
YPT1YFL038C YDR286CQ05530 114 aa5.64□□□□□ -1.51
YPT1YFL038C YPR108W-AQ3E7B3 70 aa5.64□□□□□ -1.51
YPT1YFL038C FLO9P39712 1322 aa5.64□□□□□ -1.51
YPT1YFL038C BRR2P32639 2163 aaKnown RBP5.63□□□□□ -1.51
YPT1YFL038C YLL053CP0CD98 152 aa5.63□□□□□ -1.51
YPT1YFL038C ERG2P32352 222 aa5.63□□□□□ -1.51
YPT1YFL038C REC114P32841 428 aa5.63□□□□□ -1.51
YPT1YFL038C RPB7P34087 171 aa5.63□□□□□ -1.51
YPT1YFL038C SDH8P38345 138 aa5.63□□□□□ -1.51
YPT1YFL038C YBR292CP38357 123 aa5.63□□□□□ -1.51
YPT1YFL038C STS1P38637 319 aa5.63□□□□□ -1.51
YPT1YFL038C TOK1P40310 691 aa5.63□□□□□ -1.51
YPT1YFL038C PRM5P40476 318 aa5.63□□□□□ -1.51
YPT1YFL038C SLM1P40485 686 aa5.63□□□□□ -1.51
YPT1YFL038C HXT14P42833 540 aa5.63□□□□□ -1.51
YPT1YFL038C IKS1P47042 667 aa5.63□□□□□ -1.51
YPT1YFL038C TIM21P53220 239 aa5.63□□□□□ -1.51
YPT1YFL038C TNA1P53322 534 aa5.63□□□□□ -1.51
YPT1YFL038C YNR066CP53752 436 aa5.63□□□□□ -1.51
YPT1YFL038C MRPL19P53875 158 aa5.63□□□□□ -1.51
YPT1YFL038C ADD37Q03233 198 aa5.63□□□□□ -1.51
YPT1YFL038C YMR279CQ03263 540 aa5.63□□□□□ -1.51
YPT1YFL038C HED1Q03937 162 aa5.63□□□□□ -1.51
YPT1YFL038C YDR415CQ04033 374 aaPredicted RBP5.63□□□□□ -1.51
YPT1YFL038C LRS4Q04087 347 aaKnown RBP5.63□□□□□ -1.51
YPT1YFL038C YMR082CQ04276 118 aa5.63□□□□□ -1.51
YPT1YFL038C MIX14Q04341 121 aa5.63□□□□□ -1.51
YPT1YFL038C HRI1Q05905 244 aaKnown RBP5.63□□□□□ -1.51
YPT1YFL038C MDM30Q05930 598 aa5.63□□□□□ -1.51
YPT1YFL038C RFU1Q08003 200 aa5.63□□□□□ -1.51
YPT1YFL038C YOL029CQ08187 201 aa5.63□□□□□ -1.51
YPT1YFL038C YOR186WQ08560 144 aa5.63□□□□□ -1.51
YPT1YFL038C THI72Q08579 599 aa5.63□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms