RNA–Protein interactions for RNA: YER164W

CHD1, Transcript of Chromatin remodeler that regulates various aspects of transcription, yeastyeast

Gene CHD1, Length 4,407 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CHD1YER164W PAR32Q12515 295 aaKnown RBP3.39□□□□□ -1.87
CHD1YER164W BLM10P43583 2143 aa3.39□□□□□ -1.87
CHD1YER164W RPS25BP0C0T4 108 aaKnown RBP3.39□□□□□ -1.87
CHD1YER164W RPL31AP0C2H8 113 aaKnown RBP3.39□□□□□ -1.87
CHD1YER164W RPL31BP0C2H9 113 aaKnown RBP3.39□□□□□ -1.87
CHD1YER164W YKR104WP0CE69 306 aa3.39□□□□□ -1.87
CHD1YER164W RPB5P20434 215 aa3.39□□□□□ -1.87
CHD1YER164W SCW4P53334 386 aaKnown RBP3.39□□□□□ -1.87
CHD1YER164W INN1P53901 409 aa3.39□□□□□ -1.87
CHD1YER164W MTQ2Q03920 221 aaPredicted RBP3.39□□□□□ -1.87
CHD1YER164W TVP18Q04767 167 aa3.39□□□□□ -1.87
CHD1YER164W RPS25AQ3E792 108 aaPredicted RBP3.39□□□□□ -1.87
CHD1YER164W FAS1P07149 2051 aaKnown RBP3.39□□□□□ -1.87
CHD1YER164W MDM35O60200 86 aa3.39□□□□□ -1.87
CHD1YER164W TPI1P00942 248 aaKnown RBP3.39□□□□□ -1.87
CHD1YER164W PAU1P0CE88 120 aa3.39□□□□□ -1.87
CHD1YER164W PAU14P0CE89 120 aa3.39□□□□□ -1.87
CHD1YER164W PAU6P0CE90 120 aa3.39□□□□□ -1.87
CHD1YER164W PAU18P0CE91 120 aa3.39□□□□□ -1.87
CHD1YER164W PAU8P0CE92 120 aa3.39□□□□□ -1.87
CHD1YER164W PAU11P0CE93 120 aa3.39□□□□□ -1.87
CHD1YER164W FCY2P17064 533 aa3.39□□□□□ -1.87
CHD1YER164W YCR100CP25606 316 aa3.39□□□□□ -1.87
CHD1YER164W GPX1P36014 167 aa3.39□□□□□ -1.87
CHD1YER164W PAU13P38725 120 aa3.39□□□□□ -1.87
CHD1YER164W GET2P40056 285 aa3.39□□□□□ -1.87
CHD1YER164W PAU5P43575 122 aa3.39□□□□□ -1.87
CHD1YER164W SKP1P52286 194 aa3.39□□□□□ -1.87
CHD1YER164W TYW3P53177 273 aa3.39□□□□□ -1.87
CHD1YER164W PAU10Q03050 120 aa3.39□□□□□ -1.87
CHD1YER164W CGI121Q03705 181 aaKnown RBP3.39□□□□□ -1.87
CHD1YER164W PAU20Q08322 120 aa3.39□□□□□ -1.87
CHD1YER164W REX3Q12090 404 aa3.39□□□□□ -1.87
CHD1YER164W PAU9Q3E770 120 aa3.39□□□□□ -1.87
CHD1YER164W CAR2P07991 424 aaKnown RBP3.39□□□□□ -1.87
CHD1YER164W COQ3P27680 312 aa3.39□□□□□ -1.87
CHD1YER164W FUN19P28003 413 aaPredicted RBP3.39□□□□□ -1.87
CHD1YER164W MRPL16P38064 232 aa3.39□□□□□ -1.87
CHD1YER164W TRM7P38238 310 aaKnown RBP3.39□□□□□ -1.87
CHD1YER164W YEA4P40004 342 aa3.39□□□□□ -1.87
CHD1YER164W CIS3P47001 227 aa3.39□□□□□ -1.87
CHD1YER164W GEP7P53171 287 aa3.39□□□□□ -1.87
CHD1YER164W YGR250CP53316 781 aaKnown RBP3.39□□□□□ -1.87
CHD1YER164W YLR152CP54072 576 aa3.39□□□□□ -1.87
CHD1YER164W MSS11Q03825 758 aa3.39□□□□□ -1.87
CHD1YER164W ROY1Q04847 553 aa3.39□□□□□ -1.87
CHD1YER164W PRP11Q07350 266 aaPredicted RBP3.39□□□□□ -1.87
CHD1YER164W VPS68Q12016 184 aa3.39□□□□□ -1.87
CHD1YER164W QCR2P07257 368 aa3.38□□□□□ -1.87
CHD1YER164W PAU19P0CE85 124 aa3.38□□□□□ -1.87
CHD1YER164W PAU21P0CE86 164 aa3.38□□□□□ -1.87
CHD1YER164W PAU22P0CE87 164 aa3.38□□□□□ -1.87
CHD1YER164W SEC22P22214 214 aa3.38□□□□□ -1.87
CHD1YER164W PAU3P25610 124 aa3.38□□□□□ -1.87
CHD1YER164W BUB3P26449 341 aa3.38□□□□□ -1.87
CHD1YER164W ARO2P28777 376 aaKnown RBP3.38□□□□□ -1.87
CHD1YER164W MKK2P32491 506 aa3.38□□□□□ -1.87
CHD1YER164W SDH4P37298 181 aa3.38□□□□□ -1.87
CHD1YER164W THI2P38141 450 aa3.38□□□□□ -1.87
CHD1YER164W PFS1P38872 237 aa3.38□□□□□ -1.87
CHD1YER164W LYS1P38998 373 aaRIP-Chip data3.38□□□□□ -1.87 RIP-Chip
CHD1YER164W YNL195CP40168 261 aa3.38□□□□□ -1.87
CHD1YER164W XPT1P47165 209 aa3.38□□□□□ -1.87
CHD1YER164W ERG25P53045 309 aa3.38□□□□□ -1.87
CHD1YER164W BRR6P53062 197 aa3.38□□□□□ -1.87
CHD1YER164W SKO1Q02100 647 aa3.38□□□□□ -1.87
CHD1YER164W RCE1Q03530 315 aa3.38□□□□□ -1.87
CHD1YER164W GTO3Q04806 366 aa3.38□□□□□ -1.87
CHD1YER164W TRI1Q05024 226 aa3.38□□□□□ -1.87
CHD1YER164W MSC3Q05812 728 aa3.38□□□□□ -1.87
CHD1YER164W MRPL35Q06678 367 aa3.38□□□□□ -1.87
CHD1YER164W OPI10Q08202 246 aa3.38□□□□□ -1.87
CHD1YER164W RTK1Q12100 620 aaPredicted RBP3.38□□□□□ -1.87
CHD1YER164W AIM45Q12480 344 aaKnown RBP3.38□□□□□ -1.87
CHD1YER164W YPR096CO13587 100 aa3.38□□□□□ -1.87
CHD1YER164W SCEIP03882 235 aa3.38□□□□□ -1.87
CHD1YER164W FPR1P20081 114 aaKnown RBP3.38□□□□□ -1.87
CHD1YER164W MAK32P23060 363 aa3.38□□□□□ -1.87
CHD1YER164W PET18P25362 215 aa3.38□□□□□ -1.87
CHD1YER164W HOG1P32485 435 aa3.38□□□□□ -1.87
CHD1YER164W RAD23P32628 398 aaKnown RBP3.38□□□□□ -1.87
CHD1YER164W YBR071WP38243 211 aa3.38□□□□□ -1.87
CHD1YER164W YGL185CP53100 379 aa3.38□□□□□ -1.87
CHD1YER164W YNR064CP53750 290 aa3.38□□□□□ -1.87
CHD1YER164W IGO1P53897 168 aa3.38□□□□□ -1.87
CHD1YER164W TSA2Q04120 196 aa3.38□□□□□ -1.87
CHD1YER164W KEI1Q06346 221 aa3.38□□□□□ -1.87
CHD1YER164W MET32Q12041 191 aa3.38□□□□□ -1.87
CHD1YER164W YNR034W-AQ3E841 98 aa3.38□□□□□ -1.87
CHD1YER164W HYP2P23301 157 aaKnown RBP3.38□□□□□ -1.87
CHD1YER164W ERG4P25340 473 aa3.38□□□□□ -1.87
CHD1YER164W PRE2P30656 287 aaKnown RBP3.38□□□□□ -1.87
CHD1YER164W SFC1P33303 322 aa3.38□□□□□ -1.87
CHD1YER164W GGC1P38988 300 aa3.38□□□□□ -1.87
CHD1YER164W SPC25P40014 221 aa3.38□□□□□ -1.87
CHD1YER164W PAU15P40585 124 aa3.38□□□□□ -1.87
CHD1YER164W SMD3P43321 101 aaKnown RBP3.38□□□□□ -1.87
CHD1YER164W SOL1P50278 321 aa3.38□□□□□ -1.87
CHD1YER164W TDA7P53882 636 aaPredicted RBP3.38□□□□□ -1.87
CHD1YER164W YPR127WQ06494 345 aa3.38□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 26.2 ms