RNA–Protein interactions for RNA: YER088C

DOT6, Transcript of Protein involved in rRNA and ribosome biogenesis, yeast

Gene DOT6, Length 2,013 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOT6	YER088C	TDA11	P38854	504 aa		1.35	□□□□□ -2.19
DOT6	YER088C	PET100	P38958	111 aa		1.35	□□□□□ -2.19
DOT6	YER088C	SYS1	P41544	203 aa		1.35	□□□□□ -2.19
DOT6	YER088C	GCD14	P46959	383 aa	Predicted RBP	1.35	□□□□□ -2.19
DOT6	YER088C	COX16	P47081	118 aa		1.35	□□□□□ -2.19
DOT6	YER088C	TPN1	P53099	579 aa		1.35	□□□□□ -2.19
DOT6	YER088C	YGL088W	P53151	121 aa		1.35	□□□□□ -2.19
DOT6	YER088C	ATC1	Q04005	294 aa		1.35	□□□□□ -2.19
DOT6	YER088C	PST1	Q12355	444 aa		1.35	□□□□□ -2.19
DOT6	YER088C	QCR6	P00127	147 aa		1.35	□□□□□ -2.19
DOT6	YER088C	RPL24A	P04449	155 aa	Known RBP	1.35	□□□□□ -2.19
DOT6	YER088C	YCR099C	P25657	155 aa		1.35	□□□□□ -2.19
DOT6	YER088C	SRB4	P32569	687 aa		1.35	□□□□□ -2.19
DOT6	YER088C	YKL070W	P36087	169 aa		1.35	□□□□□ -2.19
DOT6	YER088C	SEN34	P39707	275 aa		1.35	□□□□□ -2.19
DOT6	YER088C	YER034W	P40022	185 aa	Known RBP	1.35	□□□□□ -2.19
DOT6	YER088C	APQ12	P40532	138 aa		1.35	□□□□□ -2.19
DOT6	YER088C	YPR174C	Q06616	221 aa	Predicted RBP	1.35	□□□□□ -2.19
DOT6	YER088C	DAS2	Q12084	232 aa		1.35	□□□□□ -2.19
DOT6	YER088C	IES3	Q12345	250 aa		1.35	□□□□□ -2.19
DOT6	YER088C	ATG5	Q12380	294 aa		1.35	□□□□□ -2.19
DOT6	YER088C	Q0144	Q9ZZW2	109 aa		1.35	□□□□□ -2.19
DOT6	YER088C	CCW14	O13547	238 aa		1.34	□□□□□ -2.19
DOT6	YER088C	MET2	P08465	486 aa		1.34	□□□□□ -2.19
DOT6	YER088C	YAK1	P14680	807 aa		1.34	□□□□□ -2.19
DOT6	YER088C	PHO80	P20052	293 aa		1.34	□□□□□ -2.19
DOT6	YER088C	CSM1	P25651	190 aa		1.34	□□□□□ -2.19
DOT6	YER088C	MIG1	P27705	504 aa		1.34	□□□□□ -2.19
DOT6	YER088C	YKL102C	P34249	101 aa		1.34	□□□□□ -2.19
DOT6	YER088C	YBL081W	P38180	368 aa	Known RBP	1.34	□□□□□ -2.19
DOT6	YER088C	NPT1	P39683	429 aa	Known RBP	1.34	□□□□□ -2.19
DOT6	YER088C	AVT7	P40501	490 aa		1.34	□□□□□ -2.19
DOT6	YER088C	RPE1	P46969	238 aa		1.34	□□□□□ -2.19
DOT6	YER088C	LIA1	P47120	325 aa	Known RBP	1.34	□□□□□ -2.19
DOT6	YER088C	YGL185C	P53100	379 aa		1.34	□□□□□ -2.19
DOT6	YER088C	LSM3	P57743	89 aa	Known RBP	1.34	□□□□□ -2.19
DOT6	YER088C	YPL077C	Q02831	240 aa		1.34	□□□□□ -2.19
DOT6	YER088C	GAS3	Q03655	524 aa		1.34	□□□□□ -2.19
DOT6	YER088C	BOP2	Q06150	570 aa		1.34	□□□□□ -2.19
DOT6	YER088C	FEX1	Q08913	375 aa		1.34	□□□□□ -2.19
DOT6	YER088C	FEX2	Q08991	375 aa		1.34	□□□□□ -2.19
DOT6	YER088C	YPR064W	Q12492	139 aa		1.34	□□□□□ -2.19
DOT6	YER088C	FMP16	Q12497	93 aa		1.34	□□□□□ -2.19
DOT6	YER088C	YLR462W	O13556	202 aa		1.33	□□□□□ -2.2
DOT6	YER088C	TDH1	P00360	332 aa	Known RBP	1.33	□□□□□ -2.2
DOT6	YER088C	YFR010W-A	P0C5N0	62 aa		1.33	□□□□□ -2.2
DOT6	YER088C	TFS1	P14306	219 aa		1.33	□□□□□ -2.2
DOT6	YER088C	NSP1	P14907	823 aa	Known RBP	1.33	□□□□□ -2.2
DOT6	YER088C	KRE1	P17260	313 aa		1.33	□□□□□ -2.2
DOT6	YER088C	PHO13	P19881	312 aa		1.33	□□□□□ -2.2
DOT6	YER088C	GPI12	P23797	304 aa		1.33	□□□□□ -2.2
DOT6	YER088C	MEK1	P24719	497 aa	Predicted RBP	1.33	□□□□□ -2.2
DOT6	YER088C	YKL063C	P35725	167 aa		1.33	□□□□□ -2.2
DOT6	YER088C	SWD2	P36104	329 aa	Predicted RBP	1.33	□□□□□ -2.2
DOT6	YER088C	HSM3	P38348	480 aa		1.33	□□□□□ -2.2
DOT6	YER088C	PRS3	P38689	320 aa	Known RBP	1.33	□□□□□ -2.2
DOT6	YER088C	YHL049C	P38722	271 aa		1.33	□□□□□ -2.2
DOT6	YER088C	RCY1	P39531	840 aa		1.33	□□□□□ -2.2
DOT6	YER088C	SCC4	P40090	624 aa		1.33	□□□□□ -2.2
DOT6	YER088C	PRM10	P42946	383 aa		1.33	□□□□□ -2.2
DOT6	YER088C	AGP3	P43548	558 aa		1.33	□□□□□ -2.2
DOT6	YER088C	MRX5	P47007	382 aa		1.33	□□□□□ -2.2
DOT6	YER088C	ALB1	P47019	175 aa	Predicted RBP	1.33	□□□□□ -2.2
DOT6	YER088C	APS3	P47064	194 aa		1.33	□□□□□ -2.2
DOT6	YER088C	YDR278C	Q05612	105 aa		1.33	□□□□□ -2.2
DOT6	YER088C	RRP40	Q08285	240 aa	Known RBP	1.33	□□□□□ -2.2
DOT6	YER088C	PRR2	Q12310	699 aa		1.33	□□□□□ -2.2
DOT6	YER088C	MED4	Q12343	284 aa		1.33	□□□□□ -2.2
DOT6	YER088C	GEP5	Q12393	293 aa		1.33	□□□□□ -2.2
DOT6	YER088C	YPR096C	O13587	100 aa		1.33	□□□□□ -2.2
DOT6	YER088C	PET494	P07390	489 aa	Predicted RBP	1.33	□□□□□ -2.2
DOT6	YER088C	YSF3	P0C074	85 aa	Predicted RBP	1.33	□□□□□ -2.2
DOT6	YER088C	ZWF1	P11412	505 aa	Known RBP	1.33	□□□□□ -2.2
DOT6	YER088C	GRE3	P38715	327 aa	Known RBP RIP-Chip data	1.33	□□□□□ -2.2	not detected
DOT6	YER088C	YIL012W	P40551	113 aa		1.33	□□□□□ -2.2
DOT6	YER088C	RPL10	P41805	221 aa	Known RBP	1.33	□□□□□ -2.2
DOT6	YER088C	OST3	P48439	350 aa		1.33	□□□□□ -2.2
DOT6	YER088C	BOL2	P53082	120 aa		1.33	□□□□□ -2.2
DOT6	YER088C	DCR2	Q05924	578 aa		1.33	□□□□□ -2.2
DOT6	YER088C	ARC18	Q05933	178 aa	Known RBP	1.33	□□□□□ -2.2
DOT6	YER088C	GPN3	Q06543	272 aa		1.33	□□□□□ -2.2
DOT6	YER088C	YPR172W	Q06608	200 aa		1.33	□□□□□ -2.2
DOT6	YER088C	BER1	Q06688	274 aa	Known RBP	1.33	□□□□□ -2.2
DOT6	YER088C	ASR1	Q06834	288 aa		1.33	□□□□□ -2.2
DOT6	YER088C	RRT8	Q08219	342 aa		1.33	□□□□□ -2.2
DOT6	YER088C	YHR214C-D	P0CX93	97 aa		1.32	□□□□□ -2.2
DOT6	YER088C	PBN1	P25580	416 aa		1.32	□□□□□ -2.2
DOT6	YER088C	IMP1	P28627	190 aa		1.32	□□□□□ -2.2
DOT6	YER088C	SPT4	P32914	102 aa	Predicted RBP	1.32	□□□□□ -2.2
DOT6	YER088C	YHI9	P38765	294 aa		1.32	□□□□□ -2.2
DOT6	YER088C	AVT6	P40074	448 aa		1.32	□□□□□ -2.2
DOT6	YER088C	SOK1	P40317	901 aa		1.32	□□□□□ -2.2
DOT6	YER088C	YIA6	P40556	373 aa		1.32	□□□□□ -2.2
DOT6	YER088C	YLR460C	P54007	376 aa		1.32	□□□□□ -2.2
DOT6	YER088C	NHP10	Q03435	203 aa		1.32	□□□□□ -2.2
DOT6	YER088C	DPP1	Q05521	289 aa		1.32	□□□□□ -2.2
DOT6	YER088C	CDC123	Q05791	360 aa		1.32	□□□□□ -2.2
DOT6	YER088C	YLL007C	Q07799	665 aa		1.32	□□□□□ -2.2
DOT6	YER088C	YLR036C	Q07986	203 aa		1.32	□□□□□ -2.2
DOT6	YER088C	RUD3	Q12234	484 aa	Known RBP	1.32	□□□□□ -2.2

Retrieved 100 of 5,963 RNA–protein pairs in 76.4 ms