RNA–Protein interactions for RNA: YEL005C

VAB2, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene VAB2, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAB2YEL005C DID2P69771 204 aa1.87□□□□□ -2.11
VAB2YEL005C CDC123Q05791 360 aa1.87□□□□□ -2.11
VAB2YEL005C DCR2Q05924 578 aa1.87□□□□□ -2.11
VAB2YEL005C THP2O13539 261 aaKnown RBP1.86□□□□□ -2.11
VAB2YEL005C PEX4P29340 183 aa1.86□□□□□ -2.11
VAB2YEL005C NTF2P33331 125 aaKnown RBP1.86□□□□□ -2.11
VAB2YEL005C MSS2P40990 351 aa1.86□□□□□ -2.11
VAB2YEL005C ERV29P53337 310 aa1.86□□□□□ -2.11
VAB2YEL005C DAD3P69850 94 aa1.86□□□□□ -2.11
VAB2YEL005C SEY1Q99287 776 aa1.86□□□□□ -2.11
VAB2YEL005C YPR170W-BP0C5R9 85 aa1.85□□□□□ -2.11
VAB2YEL005C URA6P15700 204 aa1.85□□□□□ -2.11
VAB2YEL005C YMR31P19955 123 aa1.85□□□□□ -2.11
VAB2YEL005C NTG1P31378 399 aa1.85□□□□□ -2.11
VAB2YEL005C MDH3P32419 343 aaKnown RBP RIP-Chip data1.85□□□□□ -2.11not detected
VAB2YEL005C DOG2P38773 246 aa1.85□□□□□ -2.11
VAB2YEL005C DOG1P38774 246 aa1.85□□□□□ -2.11
VAB2YEL005C PEX17P40155 199 aa1.85□□□□□ -2.11
VAB2YEL005C YJL027CP47063 138 aaPredicted RBP1.85□□□□□ -2.11
VAB2YEL005C ERG25P53045 309 aa1.85□□□□□ -2.11
VAB2YEL005C PGA2P53903 129 aa1.85□□□□□ -2.11
VAB2YEL005C TIM11P81449 96 aaPredicted RBP1.85□□□□□ -2.11
VAB2YEL005C TPO4Q12256 659 aa1.85□□□□□ -2.11
VAB2YEL005C YBR121C-AP0C5L4 52 aa1.84□□□□□ -2.11
VAB2YEL005C PBN1P25580 416 aa1.84□□□□□ -2.11
VAB2YEL005C VTC1P40046 129 aaRIP-Chip data1.84□□□□□ -2.11not detected
VAB2YEL005C RPA43P46669 326 aa1.84□□□□□ -2.11
VAB2YEL005C BRR6P53062 197 aa1.84□□□□□ -2.11
VAB2YEL005C CWC21Q03375 135 aaKnown RBP1.84□□□□□ -2.11
VAB2YEL005C DCN1Q12395 269 aa1.84□□□□□ -2.11
VAB2YEL005C BOL1Q3E793 110 aa1.84□□□□□ -2.11
VAB2YEL005C STE18P18852 110 aa1.83□□□□□ -2.12
VAB2YEL005C COQ1P18900 473 aa1.83□□□□□ -2.12
VAB2YEL005C RPB4P20433 221 aaPredicted RBP1.83□□□□□ -2.12
VAB2YEL005C ECM33P38248 429 aaKnown RBP1.83□□□□□ -2.12
VAB2YEL005C ERV15P38312 142 aa1.83□□□□□ -2.12
VAB2YEL005C SMD3P43321 101 aaKnown RBP1.83□□□□□ -2.12
VAB2YEL005C BXI1P48558 297 aa1.83□□□□□ -2.12
VAB2YEL005C PRM8P53174 237 aa1.83□□□□□ -2.12
VAB2YEL005C MRPS8Q03799 155 aa1.83□□□□□ -2.12
VAB2YEL005C BNA7Q04066 261 aa1.83□□□□□ -2.12
VAB2YEL005C NEJ1Q06148 342 aa1.83□□□□□ -2.12
VAB2YEL005C MEU1Q07938 337 aaKnown RBP RIP-Chip data1.83□□□□□ -2.12not detected
VAB2YEL005C JLP1Q12358 412 aa1.83□□□□□ -2.12
VAB2YEL005C CDC8P00572 216 aa1.82□□□□□ -2.12
VAB2YEL005C GRX2P17695 143 aaKnown RBP1.82□□□□□ -2.12
VAB2YEL005C ATG22P25568 528 aa1.82□□□□□ -2.12
VAB2YEL005C OAC1P32332 324 aa1.82□□□□□ -2.12
VAB2YEL005C SKG1P36169 355 aa1.82□□□□□ -2.12
VAB2YEL005C PHO88P38264 188 aaPredicted RBP1.82□□□□□ -2.12
VAB2YEL005C URA8P38627 578 aaPredicted RBP1.82□□□□□ -2.12
VAB2YEL005C CTR2P38865 189 aa1.82□□□□□ -2.12
VAB2YEL005C NUP57P48837 541 aa1.82□□□□□ -2.12
VAB2YEL005C TOS8P53147 276 aa1.82□□□□□ -2.12
VAB2YEL005C ALG13P53178 202 aa1.82□□□□□ -2.12
VAB2YEL005C YDR248CQ03786 193 aa1.82□□□□□ -2.12
VAB2YEL005C YPL229WQ99395 206 aa1.82□□□□□ -2.12
VAB2YEL005C PRP18P33411 251 aaPredicted RBP1.81□□□□□ -2.12
VAB2YEL005C RTC3P38804 111 aaPredicted RBP1.81□□□□□ -2.12
VAB2YEL005C YKE4P40544 346 aa1.81□□□□□ -2.12
VAB2YEL005C PRM10P42946 383 aa1.81□□□□□ -2.12
VAB2YEL005C SNZ1Q03148 297 aa1.81□□□□□ -2.12
VAB2YEL005C LPP1Q04396 274 aa1.81□□□□□ -2.12
VAB2YEL005C USB1Q12208 290 aaKnown RBP1.81□□□□□ -2.12
VAB2YEL005C YKL183C-AQ3E765 70 aa1.81□□□□□ -2.12
VAB2YEL005C CDC28P00546 298 aaKnown RBP1.8□□□□□ -2.12
VAB2YEL005C SCL1P21243 252 aaKnown RBP1.8□□□□□ -2.12
VAB2YEL005C APS1P35181 156 aa1.8□□□□□ -2.12
VAB2YEL005C CBT1P36038 271 aaPredicted RBP1.8□□□□□ -2.12
VAB2YEL005C ERG28P40030 148 aa1.8□□□□□ -2.12
VAB2YEL005C FAR7P43592 221 aa1.8□□□□□ -2.12
VAB2YEL005C YFR054CP43622 192 aa1.8□□□□□ -2.12
VAB2YEL005C ADO1P47143 340 aaKnown RBP1.8□□□□□ -2.12
VAB2YEL005C BAT2P47176 376 aaKnown RBP1.8□□□□□ -2.12
VAB2YEL005C AIF1P52923 378 aa1.8□□□□□ -2.12
VAB2YEL005C YNL010WP53981 241 aaKnown RBP1.8□□□□□ -2.12
VAB2YEL005C MRPS28P21771 286 aa1.79□□□□□ -2.12
VAB2YEL005C DBF2P22204 572 aa1.79□□□□□ -2.12
VAB2YEL005C IDH1P28834 360 aaKnown RBP RIP-Chip data1.79□□□□□ -2.12not detected
VAB2YEL005C PRX1P34227 261 aaKnown RBP1.79□□□□□ -2.12
VAB2YEL005C RMD6P39975 231 aa1.79□□□□□ -2.12
VAB2YEL005C YNL194CP40169 301 aa1.79□□□□□ -2.12
VAB2YEL005C PEP8P40335 379 aa1.79□□□□□ -2.12
VAB2YEL005C BMT5P40493 336 aa1.79□□□□□ -2.12
VAB2YEL005C RPL33BP41056 107 aaKnown RBP1.79□□□□□ -2.12
VAB2YEL005C IRC18P47056 224 aa1.79□□□□□ -2.12
VAB2YEL005C RAD17P48581 401 aa1.79□□□□□ -2.12
VAB2YEL005C MGA1P53050 456 aa1.79□□□□□ -2.12
VAB2YEL005C CYT2Q00873 224 aa1.79□□□□□ -2.12
VAB2YEL005C ARR2Q06597 130 aa1.79□□□□□ -2.12
VAB2YEL005C CDC33P07260 213 aaKnown RBP1.78□□□□□ -2.12
VAB2YEL005C MGM101P32787 269 aaKnown RBP1.78□□□□□ -2.12
VAB2YEL005C SRY1P36007 326 aa1.78□□□□□ -2.12
VAB2YEL005C MRPL28P36527 147 aa1.78□□□□□ -2.12
VAB2YEL005C POP4P38336 279 aa1.78□□□□□ -2.12
VAB2YEL005C YHR022CP38763 256 aa1.78□□□□□ -2.12
VAB2YEL005C DSE2P38844 325 aa1.78□□□□□ -2.12
VAB2YEL005C AST2P39945 430 aaKnown RBP1.78□□□□□ -2.12
VAB2YEL005C FCY21P40039 528 aa1.78□□□□□ -2.12
VAB2YEL005C PGD1P40356 397 aa1.78□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 55.2 ms