RNA–Protein interactions for RNA: YDR384C

ATO3, Transcript of Plasma membrane protein, putative ammonium transporter, yeast

Gene ATO3, Length 828 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATO3	YDR384C	RFA3	P26755	122 aa	Known RBP	4.88	□□□□□ -1.63
ATO3	YDR384C	TRR1	P29509	319 aa	Known RBP	4.88	□□□□□ -1.63
ATO3	YDR384C	MNS1	P32906	549 aa		4.88	□□□□□ -1.63
ATO3	YDR384C	SWD3	P38123	315 aa		4.88	□□□□□ -1.63
ATO3	YDR384C	ARC40	P38328	384 aa	Known RBP	4.88	□□□□□ -1.63
ATO3	YDR384C	YMR262W	P38430	313 aa		4.88	□□□□□ -1.63
ATO3	YDR384C	RFC2	P40348	353 aa		4.88	□□□□□ -1.63
ATO3	YDR384C	RPN14	P53196	417 aa		4.88	□□□□□ -1.63
ATO3	YDR384C	MRPL19	P53875	158 aa		4.88	□□□□□ -1.63
ATO3	YDR384C	API2	Q04413	109 aa		4.88	□□□□□ -1.63
ATO3	YDR384C	ANT1	Q06497	328 aa		4.88	□□□□□ -1.63
ATO3	YDR384C	RFU1	Q08003	200 aa		4.88	□□□□□ -1.63
ATO3	YDR384C	RRS1	Q08746	203 aa	Known RBP	4.88	□□□□□ -1.63
ATO3	YDR384C	SCP1	Q08873	200 aa		4.88	□□□□□ -1.63
ATO3	YDR384C	TGS1	Q12052	315 aa		4.88	□□□□□ -1.63
ATO3	YDR384C	FRE8	Q12209	686 aa		4.88	□□□□□ -1.63
ATO3	YDR384C	IPP1	P00817	287 aa	Known RBP	4.87	□□□□□ -1.63
ATO3	YDR384C	MAK32	P23060	363 aa		4.87	□□□□□ -1.63
ATO3	YDR384C	IMP1	P28627	190 aa		4.87	□□□□□ -1.63
ATO3	YDR384C	RPB7	P34087	171 aa		4.87	□□□□□ -1.63
ATO3	YDR384C	YBR096W	P38256	230 aa		4.87	□□□□□ -1.63
ATO3	YDR384C	BMT5	P40493	336 aa		4.87	□□□□□ -1.63
ATO3	YDR384C	AIR1	P40507	360 aa	Known RBP	4.87	□□□□□ -1.63
ATO3	YDR384C	GNA1	P43577	159 aa	Predicted RBP	4.87	□□□□□ -1.63
ATO3	YDR384C	SKP1	P52286	194 aa		4.87	□□□□□ -1.63
ATO3	YDR384C	YGL117W	P53133	265 aa		4.87	□□□□□ -1.63
ATO3	YDR384C	SMX3	P54999	86 aa	Predicted RBP	4.87	□□□□□ -1.63
ATO3	YDR384C	SKO1	Q02100	647 aa		4.87	□□□□□ -1.63
ATO3	YDR384C	SRP1	Q02821	542 aa	Known RBP	4.87	□□□□□ -1.63
ATO3	YDR384C	HED1	Q03937	162 aa		4.87	□□□□□ -1.63
ATO3	YDR384C	RAF1	Q06891	181 aa		4.87	□□□□□ -1.63
ATO3	YDR384C	YDL218W	Q07629	317 aa		4.87	□□□□□ -1.63
ATO3	YDR384C	AEP3	Q12089	606 aa		4.87	□□□□□ -1.63
ATO3	YDR384C	MED4	Q12343	284 aa		4.87	□□□□□ -1.63
ATO3	YDR384C	YBR085C-A	O43137	85 aa		4.86	□□□□□ -1.63
ATO3	YDR384C	RPL25	P04456	142 aa	Known RBP	4.86	□□□□□ -1.63
ATO3	YDR384C	DBP2	P24783	546 aa	Known RBP	4.86	□□□□□ -1.63
ATO3	YDR384C	ERG2	P32352	222 aa		4.86	□□□□□ -1.63
ATO3	YDR384C	PDC2	P32896	925 aa		4.86	□□□□□ -1.63
ATO3	YDR384C	CLB6	P32943	380 aa		4.86	□□□□□ -1.63
ATO3	YDR384C	SSO2	P39926	295 aa		4.86	□□□□□ -1.63
ATO3	YDR384C	PIG2	P40187	538 aa		4.86	□□□□□ -1.63
ATO3	YDR384C	YIL029C	P40538	142 aa		4.86	□□□□□ -1.63
ATO3	YDR384C	VPS28	Q02767	242 aa		4.86	□□□□□ -1.63
ATO3	YDR384C	YDR415C	Q04033	374 aa	Predicted RBP	4.86	□□□□□ -1.63
ATO3	YDR384C	YDL086W	Q07505	273 aa		4.86	□□□□□ -1.63
ATO3	YDR384C	YOL024W	Q08172	172 aa		4.86	□□□□□ -1.63
ATO3	YDR384C	ALG6	Q12001	544 aa	Known RBP	4.86	□□□□□ -1.63
ATO3	YDR384C	USB1	Q12208	290 aa	Known RBP	4.86	□□□□□ -1.63
ATO3	YDR384C	PRS5	Q12265	496 aa	Known RBP	4.86	□□□□□ -1.63
ATO3	YDR384C	HUG1	Q6Q5K6	68 aa		4.86	□□□□□ -1.63
ATO3	YDR384C	RPP2B	P02400	110 aa	Known RBP	4.85	□□□□□ -1.63
ATO3	YDR384C	GAL1	P04385	528 aa		4.85	□□□□□ -1.63
ATO3	YDR384C	QCR2	P07257	368 aa		4.85	□□□□□ -1.63
ATO3	YDR384C	OLE1	P21147	510 aa	Known RBP	4.85	□□□□□ -1.63
ATO3	YDR384C	VMA3	P25515	160 aa		4.85	□□□□□ -1.63
ATO3	YDR384C	YPC1	P38298	316 aa		4.85	□□□□□ -1.63
ATO3	YDR384C	SIP18	P50263	79 aa		4.85	□□□□□ -1.63
ATO3	YDR384C	UBC12	P52491	188 aa		4.85	□□□□□ -1.63
ATO3	YDR384C	YIP5	P53108	310 aa		4.85	□□□□□ -1.63
ATO3	YDR384C	ERV25	P54837	211 aa	Known RBP	4.85	□□□□□ -1.63
ATO3	YDR384C	ISU1	Q03020	165 aa		4.85	□□□□□ -1.63
ATO3	YDR384C	HAS1	Q03532	505 aa	Known RBP	4.85	□□□□□ -1.63
ATO3	YDR384C	YDR391C	Q04170	232 aa		4.85	□□□□□ -1.63
ATO3	YDR384C	YPR098C	Q06089	161 aa		4.85	□□□□□ -1.63
ATO3	YDR384C	BER1	Q06688	274 aa	Known RBP	4.85	□□□□□ -1.63
ATO3	YDR384C	GAT3	Q07928	141 aa		4.85	□□□□□ -1.63
ATO3	YDR384C	VAM3	Q12241	283 aa		4.85	□□□□□ -1.63
ATO3	YDR384C	PRM4	Q12498	284 aa		4.85	□□□□□ -1.63
ATO3	YDR384C	YPR108W-A	Q3E7B3	70 aa		4.85	□□□□□ -1.63
ATO3	YDR384C	YLR365W	Q7LIF2	110 aa		4.85	□□□□□ -1.63
ATO3	YDR384C	CKA1	P15790	372 aa		4.84	□□□□□ -1.63
ATO3	YDR384C	FUS3	P16892	353 aa	Known RBP	4.84	□□□□□ -1.63
ATO3	YDR384C	RPI1	P23250	407 aa	Known RBP	4.84	□□□□□ -1.63
ATO3	YDR384C	RPD3	P32561	433 aa		4.84	□□□□□ -1.63
ATO3	YDR384C	CUE1	P38428	203 aa		4.84	□□□□□ -1.63
ATO3	YDR384C	POP2	P39008	433 aa		4.84	□□□□□ -1.63
ATO3	YDR384C	SEN34	P39707	275 aa		4.84	□□□□□ -1.63
ATO3	YDR384C	GCV3	P39726	170 aa	Predicted RBP	4.84	□□□□□ -1.63
ATO3	YDR384C	YMR144W	P40214	342 aa	Known RBP	4.84	□□□□□ -1.63
ATO3	YDR384C	XBP1	P40489	647 aa		4.84	□□□□□ -1.63
ATO3	YDR384C	GLR1	P41921	483 aa	Known RBP	4.84	□□□□□ -1.63
ATO3	YDR384C	AGX1	P43567	385 aa		4.84	□□□□□ -1.63
ATO3	YDR384C	NUP42	P49686	430 aa	Known RBP	4.84	□□□□□ -1.63
ATO3	YDR384C	UBC13	P52490	153 aa		4.84	□□□□□ -1.63
ATO3	YDR384C	PNC1	P53184	216 aa	Known RBP	4.84	□□□□□ -1.63
ATO3	YDR384C	SLX9	P53251	210 aa	Predicted RBP	4.84	□□□□□ -1.63
ATO3	YDR384C	CWC25	P53854	179 aa	Known RBP	4.84	□□□□□ -1.63
ATO3	YDR384C	TIM44	Q01852	431 aa		4.84	□□□□□ -1.63
ATO3	YDR384C	CAC2	Q04199	468 aa		4.84	□□□□□ -1.63
ATO3	YDR384C	YDR286C	Q05530	114 aa		4.84	□□□□□ -1.63
ATO3	YDR384C	PIN3	Q06449	215 aa		4.84	□□□□□ -1.63
ATO3	YDR384C	NOC4	Q06512	552 aa	Predicted RBP	4.84	□□□□□ -1.63
ATO3	YDR384C	SWT1	Q12104	458 aa		4.84	□□□□□ -1.63
ATO3	YDR384C	YLR108C	Q12259	485 aa		4.84	□□□□□ -1.63
ATO3	YDR384C	YLR146W-A	Q2V2P1	62 aa		4.84	□□□□□ -1.63
ATO3	YDR384C	RPL35A	P0CX84	120 aa	Known RBP	4.83	□□□□□ -1.64
ATO3	YDR384C	RPL35B	P0CX85	120 aa	Known RBP	4.83	□□□□□ -1.64
ATO3	YDR384C	NAT2	P37293	288 aa		4.83	□□□□□ -1.64
ATO3	YDR384C	PAC2	P39937	518 aa		4.83	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms