RNA–Protein interactions for RNA: YDL003W

MCD1, Transcript of Essential alpha-kleisin subunit of the cohesin complex, yeastyeast

Gene MCD1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MCD1YDL003W TAM41P53230 385 aa1.98□□□□□ -2.09
MCD1YDL003W YNL260CP53846 198 aa1.98□□□□□ -2.09
MCD1YDL003W PDR16P53860 351 aaKnown RBP1.98□□□□□ -2.09
MCD1YDL003W APJ1P53940 528 aa1.98□□□□□ -2.09
MCD1YDL003W ACT1P60010 375 aaKnown RBP1.98□□□□□ -2.09
MCD1YDL003W TMA23Q03525 211 aa1.98□□□□□ -2.09
MCD1YDL003W RCE1Q03530 315 aa1.98□□□□□ -2.09
MCD1YDL003W YDR248CQ03786 193 aa1.98□□□□□ -2.09
MCD1YDL003W YML096WQ04489 525 aa1.98□□□□□ -2.09
MCD1YDL003W NAT4Q04751 285 aa1.98□□□□□ -2.09
MCD1YDL003W GTO3Q04806 366 aa1.98□□□□□ -2.09
MCD1YDL003W YMR315WQ04869 349 aaKnown RBP1.98□□□□□ -2.09
MCD1YDL003W YLR456WQ06199 204 aa1.98□□□□□ -2.09
MCD1YDL003W ECM7Q06200 448 aa1.98□□□□□ -2.09
MCD1YDL003W CRD1Q07560 283 aa1.98□□□□□ -2.09
MCD1YDL003W PAU23Q07987 124 aa1.98□□□□□ -2.09
MCD1YDL003W PLB3Q08108 686 aa1.98□□□□□ -2.09
MCD1YDL003W NAT5Q08689 176 aa1.98□□□□□ -2.09
MCD1YDL003W FSF1Q12029 327 aaKnown RBP1.98□□□□□ -2.09
MCD1YDL003W PAU17Q12370 124 aa1.98□□□□□ -2.09
MCD1YDL003W ERP3Q12403 225 aa1.98□□□□□ -2.09
MCD1YDL003W YPL247CQ12523 523 aa1.98□□□□□ -2.09
MCD1YDL003W RPL13AQ12690 199 aaPredicted RBP1.98□□□□□ -2.09
MCD1YDL003W RPS25AQ3E792 108 aaPredicted RBP1.98□□□□□ -2.09
MCD1YDL003W QCR7P00128 127 aa1.97□□□□□ -2.09
MCD1YDL003W TDH2P00358 332 aaKnown RBP1.97□□□□□ -2.09
MCD1YDL003W ILV5P06168 395 aaKnown RBP1.97□□□□□ -2.09
MCD1YDL003W TY2A-FP0CX61 438 aa1.97□□□□□ -2.09
MCD1YDL003W TY2A-GR2P0CX62 438 aa1.97□□□□□ -2.09
MCD1YDL003W RPL35AP0CX84 120 aaKnown RBP1.97□□□□□ -2.09
MCD1YDL003W RPL35BP0CX85 120 aaKnown RBP1.97□□□□□ -2.09
MCD1YDL003W CDC42P19073 191 aa1.97□□□□□ -2.09
MCD1YDL003W PPH21P23594 369 aa1.97□□□□□ -2.09
MCD1YDL003W ELO2P25358 347 aa1.97□□□□□ -2.09
MCD1YDL003W GEX1P25596 615 aa1.97□□□□□ -2.09
MCD1YDL003W PPA2P28239 310 aa1.97□□□□□ -2.09
MCD1YDL003W YEF1P32622 495 aa1.97□□□□□ -2.09
MCD1YDL003W ALK2P32789 676 aaPredicted RBP1.97□□□□□ -2.09
MCD1YDL003W MNS1P32906 549 aa1.97□□□□□ -2.09
MCD1YDL003W UPS2P35200 230 aa1.97□□□□□ -2.09
MCD1YDL003W PAN3P36102 679 aaPredicted RBP1.97□□□□□ -2.09
MCD1YDL003W DAD2P36162 133 aa1.97□□□□□ -2.09
MCD1YDL003W ZTA1P38230 334 aaKnown RBP1.97□□□□□ -2.09
MCD1YDL003W DOG1P38774 246 aa1.97□□□□□ -2.09
MCD1YDL003W YHR210CP38893 341 aa1.97□□□□□ -2.09
MCD1YDL003W RPB11P38902 120 aa1.97□□□□□ -2.09
MCD1YDL003W HSP10P38910 106 aa1.97□□□□□ -2.09
MCD1YDL003W YEL028WP39989 153 aa1.97□□□□□ -2.09
MCD1YDL003W SPC25P40014 221 aa1.97□□□□□ -2.09
MCD1YDL003W NSA2P40078 261 aaKnown RBP1.97□□□□□ -2.09
MCD1YDL003W YIL067CP40514 678 aa1.97□□□□□ -2.09
MCD1YDL003W RRT5P43607 289 aa1.97□□□□□ -2.09
MCD1YDL003W GPI14P47088 403 aaKnown RBP1.97□□□□□ -2.09
MCD1YDL003W STE24P47154 453 aa1.97□□□□□ -2.09
MCD1YDL003W RIB4P50861 169 aaPredicted RBP1.97□□□□□ -2.09
MCD1YDL003W SHY1P53266 389 aa1.97□□□□□ -2.09
MCD1YDL003W RTT102P53330 157 aa1.97□□□□□ -2.09
MCD1YDL003W PDR17P53844 350 aa1.97□□□□□ -2.09
MCD1YDL003W DIA1P54005 336 aa1.97□□□□□ -2.09
MCD1YDL003W HHT1P61830 136 aa1.97□□□□□ -2.09
MCD1YDL003W CDC14Q00684 551 aa1.97□□□□□ -2.09
MCD1YDL003W YPL014WQ02606 381 aa1.97□□□□□ -2.09
MCD1YDL003W NUP100Q02629 959 aa1.97□□□□□ -2.09
MCD1YDL003W ELC1Q03071 99 aa1.97□□□□□ -2.09
MCD1YDL003W MET31Q03081 177 aa1.97□□□□□ -2.09
MCD1YDL003W YML079WQ03629 201 aa1.97□□□□□ -2.09
MCD1YDL003W GAS3Q03655 524 aa1.97□□□□□ -2.09
MCD1YDL003W YML018CQ03730 393 aa1.97□□□□□ -2.09
MCD1YDL003W MSS11Q03825 758 aa1.97□□□□□ -2.09
MCD1YDL003W UPS3Q04006 179 aa1.97□□□□□ -2.09
MCD1YDL003W THI74Q04083 370 aa1.97□□□□□ -2.09
MCD1YDL003W SDH7Q04401 133 aa1.97□□□□□ -2.09
MCD1YDL003W YMR253CQ04835 414 aa1.97□□□□□ -2.09
MCD1YDL003W ERP1Q05359 219 aaKnown RBP1.97□□□□□ -2.09
MCD1YDL003W MRX8Q05473 314 aa1.97□□□□□ -2.09
MCD1YDL003W BLS1Q06071 122 aa1.97□□□□□ -2.09
MCD1YDL003W YPR114WQ06107 315 aa1.97□□□□□ -2.09
MCD1YDL003W SUE1Q06524 206 aa1.97□□□□□ -2.09
MCD1YDL003W AAD4Q07747 329 aa1.97□□□□□ -2.09
MCD1YDL003W TMS1Q12116 473 aa1.97□□□□□ -2.09
MCD1YDL003W PDH1Q12428 516 aaKnown RBP1.97□□□□□ -2.09
MCD1YDL003W PAR32Q12515 295 aaKnown RBP1.97□□□□□ -2.09
MCD1YDL003W FOL3Q12676 427 aaPredicted RBP1.97□□□□□ -2.09
MCD1YDL003W YIL177CP40434 1758 aa1.97□□□□□ -2.09
MCD1YDL003W YJL225CP40889 1758 aa1.97□□□□□ -2.09
MCD1YDL003W MSW1P04803 379 aa1.97□□□□□ -2.09
MCD1YDL003W TY2A-LR1P0C2J4 438 aa1.97□□□□□ -2.09
MCD1YDL003W RPB5P20434 215 aa1.97□□□□□ -2.09
MCD1YDL003W YCR007CP25354 239 aa1.97□□□□□ -2.09
MCD1YDL003W TY2A-CP25383 438 aa1.97□□□□□ -2.09
MCD1YDL003W LRE1P25579 583 aaKnown RBP1.97□□□□□ -2.09
MCD1YDL003W TRR1P29509 319 aaKnown RBP1.97□□□□□ -2.09
MCD1YDL003W ERG3P32353 365 aa1.97□□□□□ -2.09
MCD1YDL003W MRP49P32388 137 aa1.97□□□□□ -2.09
MCD1YDL003W DRE2P36152 348 aa1.97□□□□□ -2.09
MCD1YDL003W PAU24P38155 120 aa1.97□□□□□ -2.09
MCD1YDL003W YBR096WP38256 230 aa1.97□□□□□ -2.09
MCD1YDL003W YPC1P38298 316 aa1.97□□□□□ -2.09
MCD1YDL003W YBR292CP38357 123 aa1.97□□□□□ -2.09
MCD1YDL003W TRR2P38816 342 aa1.97□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms