RNA–Protein interactions for RNA: YCL054W

SPB1, Transcript of AdoMet-dependent methyltransferase, yeast

Gene SPB1, Length 2,526 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPB1	YCL054W	YNR066C	P53752	436 aa		2.19	□□□□□ -2.06
SPB1	YCL054W	BOR1	P53838	576 aa		2.19	□□□□□ -2.06
SPB1	YCL054W	YNL095C	P53932	642 aa		2.19	□□□□□ -2.06
SPB1	YCL054W	PEX12	Q04370	399 aa		2.19	□□□□□ -2.06
SPB1	YCL054W	YMR317W	Q04893	1140 aa		2.19	□□□□□ -2.06
SPB1	YCL054W	SML1	Q04964	104 aa		2.19	□□□□□ -2.06
SPB1	YCL054W	YPR147C	Q06522	304 aa	Known RBP	2.19	□□□□□ -2.06
SPB1	YCL054W	RPN8	Q08723	338 aa	Known RBP	2.19	□□□□□ -2.06
SPB1	YCL054W	SME1	Q12330	94 aa	Predicted RBP	2.19	□□□□□ -2.06
SPB1	YCL054W	YPR064W	Q12492	139 aa		2.19	□□□□□ -2.06
SPB1	YCL054W	QCR2	P07257	368 aa		2.19	□□□□□ -2.06
SPB1	YCL054W	GRX2	P17695	143 aa	Known RBP	2.19	□□□□□ -2.06
SPB1	YCL054W	ATG15	P25641	520 aa		2.19	□□□□□ -2.06
SPB1	YCL054W	AEP1	P32493	518 aa		2.19	□□□□□ -2.06
SPB1	YCL054W	YOX1	P34161	385 aa		2.19	□□□□□ -2.06
SPB1	YCL054W	UTH1	P36135	365 aa		2.19	□□□□□ -2.06
SPB1	YCL054W	SHE1	P38200	338 aa		2.19	□□□□□ -2.06
SPB1	YCL054W	SDS24	P38314	527 aa		2.19	□□□□□ -2.06
SPB1	YCL054W	YJR056C	P47115	236 aa		2.19	□□□□□ -2.06
SPB1	YCL054W	PGU1	P47180	361 aa		2.19	□□□□□ -2.06
SPB1	YCL054W	YPL113C	Q02961	396 aa		2.19	□□□□□ -2.06
SPB1	YCL054W	YNG1	Q08465	219 aa		2.19	□□□□□ -2.06
SPB1	YCL054W	YCT1	Q12235	531 aa		2.19	□□□□□ -2.06
SPB1	YCL054W	ERD1	P16151	362 aa		2.18	□□□□□ -2.06
SPB1	YCL054W	SRP102	P36057	244 aa	Predicted RBP	2.18	□□□□□ -2.06
SPB1	YCL054W	FZO1	P38297	855 aa		2.18	□□□□□ -2.06
SPB1	YCL054W	POP4	P38336	279 aa		2.18	□□□□□ -2.06
SPB1	YCL054W	TIM17	P39515	158 aa		2.18	□□□□□ -2.06
SPB1	YCL054W	COX15	P40086	486 aa		2.18	□□□□□ -2.06
SPB1	YCL054W	BUD13	P46947	266 aa	Predicted RBP	2.18	□□□□□ -2.06
SPB1	YCL054W	YPS5	P53057	165 aa		2.18	□□□□□ -2.06
SPB1	YCL054W	YGR015C	P53208	328 aa		2.18	□□□□□ -2.06
SPB1	YCL054W	CLD1	P53264	445 aa		2.18	□□□□□ -2.06
SPB1	YCL054W	SYF2	P53277	215 aa	Predicted RBP	2.18	□□□□□ -2.06
SPB1	YCL054W	GMC1	Q04399	608 aa		2.18	□□□□□ -2.06
SPB1	YCL054W	GAS2	Q06135	555 aa		2.18	□□□□□ -2.06
SPB1	YCL054W	MHR1	Q06630	226 aa		2.18	□□□□□ -2.06
SPB1	YCL054W	YOR292C	Q08743	309 aa		2.18	□□□□□ -2.06
SPB1	YCL054W	USB1	Q12208	290 aa	Known RBP	2.18	□□□□□ -2.06
SPB1	YCL054W	JLP1	Q12358	412 aa		2.18	□□□□□ -2.06
SPB1	YCL054W	FOL3	Q12676	427 aa	Predicted RBP	2.18	□□□□□ -2.06
SPB1	YCL054W	CMD1	P06787	147 aa	Known RBP	2.18	□□□□□ -2.06
SPB1	YCL054W	SPT3	P06844	337 aa		2.18	□□□□□ -2.06
SPB1	YCL054W	PUT1	P09368	476 aa		2.18	□□□□□ -2.06
SPB1	YCL054W	YKR104W	P0CE69	306 aa		2.18	□□□□□ -2.06
SPB1	YCL054W	CTA1	P15202	515 aa		2.18	□□□□□ -2.06
SPB1	YCL054W	CPT1	P17898	393 aa		2.18	□□□□□ -2.06
SPB1	YCL054W	MRPL20	P22354	195 aa	Predicted RBP	2.18	□□□□□ -2.06
SPB1	YCL054W	INO2	P26798	304 aa		2.18	□□□□□ -2.06
SPB1	YCL054W	YKR041W	P36134	250 aa		2.18	□□□□□ -2.06
SPB1	YCL054W	YCR087C-A	P37263	153 aa		2.18	□□□□□ -2.06
SPB1	YCL054W	YFL012W	P43580	148 aa		2.18	□□□□□ -2.06
SPB1	YCL054W	CIS3	P47001	227 aa		2.18	□□□□□ -2.06
SPB1	YCL054W	SDS23	P53172	527 aa		2.18	□□□□□ -2.06
SPB1	YCL054W	NQM1	P53228	333 aa	Predicted RBP	2.18	□□□□□ -2.06
SPB1	YCL054W	ADD37	Q03233	198 aa		2.18	□□□□□ -2.06
SPB1	YCL054W	SPC24	Q04477	213 aa		2.18	□□□□□ -2.06
SPB1	YCL054W	FSH2	Q05015	223 aa		2.18	□□□□□ -2.06
SPB1	YCL054W	DPP1	Q05521	289 aa		2.18	□□□□□ -2.06
SPB1	YCL054W	ARC18	Q05933	178 aa	Known RBP	2.18	□□□□□ -2.06
SPB1	YCL054W	YLR177W	Q06251	628 aa		2.18	□□□□□ -2.06
SPB1	YCL054W	JID1	Q12350	301 aa		2.18	□□□□□ -2.06
SPB1	YCL054W	HTZ1	Q12692	134 aa	Known RBP	2.18	□□□□□ -2.06
SPB1	YCL054W	PET20	Q99373	253 aa		2.18	□□□□□ -2.06
SPB1	YCL054W	YPL229W	Q99395	206 aa		2.18	□□□□□ -2.06
SPB1	YCL054W	CPA1	P07258	411 aa	Known RBP	2.17	□□□□□ -2.06
SPB1	YCL054W	MET2	P08465	486 aa		2.17	□□□□□ -2.06
SPB1	YCL054W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	2.17	□□□□□ -2.06	not detected
SPB1	YCL054W	NSP1	P14907	823 aa	Known RBP	2.17	□□□□□ -2.06
SPB1	YCL054W	EPT1	P22140	391 aa		2.17	□□□□□ -2.06
SPB1	YCL054W	CDC10	P25342	322 aa	Known RBP	2.17	□□□□□ -2.06
SPB1	YCL054W	TRR1	P29509	319 aa	Known RBP	2.17	□□□□□ -2.06
SPB1	YCL054W	CLG1	P35190	452 aa		2.17	□□□□□ -2.06
SPB1	YCL054W	SRY1	P36007	326 aa		2.17	□□□□□ -2.06
SPB1	YCL054W	SRP14	P38985	146 aa		2.17	□□□□□ -2.06
SPB1	YCL054W	IRC18	P47056	224 aa		2.17	□□□□□ -2.06
SPB1	YCL054W	BIR1	P47134	954 aa		2.17	□□□□□ -2.06
SPB1	YCL054W	OST3	P48439	350 aa		2.17	□□□□□ -2.06
SPB1	YCL054W	VMA10	P48836	114 aa	Known RBP	2.17	□□□□□ -2.06
SPB1	YCL054W	USE1	P53146	245 aa		2.17	□□□□□ -2.06
SPB1	YCL054W	TOS8	P53147	276 aa		2.17	□□□□□ -2.06
SPB1	YCL054W	NRK1	P53915	240 aa		2.17	□□□□□ -2.06
SPB1	YCL054W	OSH6	Q02201	448 aa		2.17	□□□□□ -2.06
SPB1	YCL054W	RMI1	Q02685	241 aa		2.17	□□□□□ -2.06
SPB1	YCL054W	SDC1	Q03323	175 aa		2.17	□□□□□ -2.06
SPB1	YCL054W	HRI1	Q05905	244 aa	Known RBP	2.17	□□□□□ -2.06
SPB1	YCL054W	PPT2	Q12036	173 aa		2.17	□□□□□ -2.06
SPB1	YCL054W	NOT5	Q12514	560 aa	Predicted RBP	2.17	□□□□□ -2.06
SPB1	YCL054W	TRA1	P38811	3744 aa		2.17	□□□□□ -2.06
SPB1	YCL054W	URA10	P30402	227 aa		2.17	□□□□□ -2.06
SPB1	YCL054W	MRP21	P38175	177 aa		2.17	□□□□□ -2.06
SPB1	YCL054W	GOS1	P38736	223 aa		2.17	□□□□□ -2.06
SPB1	YCL054W	TRM5	P38793	499 aa		2.17	□□□□□ -2.06
SPB1	YCL054W	TDA11	P38854	504 aa		2.17	□□□□□ -2.06
SPB1	YCL054W	PTH1	P38876	190 aa	Known RBP	2.17	□□□□□ -2.06
SPB1	YCL054W	CYC2	P38909	366 aa		2.17	□□□□□ -2.06
SPB1	YCL054W	CRZ1	P53968	678 aa		2.17	□□□□□ -2.06
SPB1	YCL054W	NUP49	Q02199	472 aa		2.17	□□□□□ -2.06
SPB1	YCL054W	EMI1	Q04406	187 aa		2.17	□□□□□ -2.06
SPB1	YCL054W	YML096W	Q04489	525 aa		2.17	□□□□□ -2.06

Retrieved 100 of 5,963 RNA–protein pairs in 90.5 ms