RNA–Protein interactions for RNA: YCL020W

YCL020W, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YCL020W, Length 1,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCL020WYCL020W YER135CP40082 130 aa1.3□□□□□ -2.2
YCL020WYCL020W NUP49Q02199 472 aa1.3□□□□□ -2.2
YCL020WYCL020W YOR020W-AQ3E824 90 aa1.3□□□□□ -2.2
YCL020WYCL020W MATALPHA1P0CY06 175 aa1.29□□□□□ -2.2
YCL020WYCL020W HMLALPHA1P0CY07 175 aa1.29□□□□□ -2.2
YCL020WYCL020W PEX17P40155 199 aa1.29□□□□□ -2.2
YCL020WYCL020W YJR149WP47177 404 aa1.29□□□□□ -2.2
YCL020WYCL020W YML096WQ04489 525 aa1.29□□□□□ -2.2
YCL020WYCL020W SML1Q04964 104 aa1.29□□□□□ -2.2
YCL020WYCL020W CDC8P00572 216 aa1.28□□□□□ -2.2
YCL020WYCL020W HAM1P47119 197 aaKnown RBP1.28□□□□□ -2.2
YCL020WYCL020W NTF2P33331 125 aaKnown RBP1.27□□□□□ -2.21
YCL020WYCL020W RPL33BP41056 107 aaKnown RBP1.27□□□□□ -2.21
YCL020WYCL020W MRPL50P53724 139 aa1.27□□□□□ -2.21
YCL020WYCL020W YLR162WQ06235 118 aa1.27□□□□□ -2.21
YCL020WYCL020W USB1Q12208 290 aaKnown RBP1.27□□□□□ -2.21
YCL020WYCL020W CDC10P25342 322 aaKnown RBP1.26□□□□□ -2.21
YCL020WYCL020W AVT2P39981 480 aa1.26□□□□□ -2.21
YCL020WYCL020W SSQ1Q05931 657 aaPredicted RBP1.26□□□□□ -2.21
YCL020WYCL020W DRS2P39524 1355 aa1.26□□□□□ -2.21
YCL020WYCL020W RPL2AP0CX45 254 aaKnown RBP1.25□□□□□ -2.21
YCL020WYCL020W RPL2BP0CX46 254 aaKnown RBP1.25□□□□□ -2.21
YCL020WYCL020W RPO26P20435 155 aa1.25□□□□□ -2.21
YCL020WYCL020W MRPL25P23369 157 aa1.25□□□□□ -2.21
YCL020WYCL020W VPS21P36017 210 aaKnown RBP1.25□□□□□ -2.21
YCL020WYCL020W IRC22P40006 225 aa1.25□□□□□ -2.21
YCL020WYCL020W YRB2P40517 327 aa1.25□□□□□ -2.21
YCL020WYCL020W ILM1P47155 203 aa1.25□□□□□ -2.21
YCL020WYCL020W BOL2P53082 120 aa1.25□□□□□ -2.21
YCL020WYCL020W NSA1P53136 463 aaPredicted RBP1.25□□□□□ -2.21
YCL020WYCL020W YNR077CP53758 84 aa1.25□□□□□ -2.21
YCL020WYCL020W PET117Q02771 107 aa1.25□□□□□ -2.21
YCL020WYCL020W PSF1Q12488 208 aa1.25□□□□□ -2.21
YCL020WYCL020W YCR016WP25617 290 aaKnown RBP1.24□□□□□ -2.21
YCL020WYCL020W SRB4P32569 687 aa1.24□□□□□ -2.21
YCL020WYCL020W SRY1P36007 326 aa1.24□□□□□ -2.21
YCL020WYCL020W URA8P38627 578 aaPredicted RBP1.24□□□□□ -2.21
YCL020WYCL020W AIF1P52923 378 aa1.24□□□□□ -2.21
YCL020WYCL020W SRL4Q03085 281 aa1.24□□□□□ -2.21
YCL020WYCL020W TPO4Q12256 659 aa1.24□□□□□ -2.21
YCL020WYCL020W RPL27BP0C2H7 136 aaKnown RBP1.23□□□□□ -2.21
YCL020WYCL020W YGL010WP25338 174 aa1.23□□□□□ -2.21
YCL020WYCL020W MEI4P29467 408 aa1.23□□□□□ -2.21
YCL020WYCL020W MSN4P33749 630 aa1.23□□□□□ -2.21
YCL020WYCL020W YBR220CP38318 560 aa1.23□□□□□ -2.21
YCL020WYCL020W CUE1P38428 203 aa1.23□□□□□ -2.21
YCL020WYCL020W TIR3P40552 269 aa1.23□□□□□ -2.21
YCL020WYCL020W BUD25P85052 153 aa1.23□□□□□ -2.21
YCL020WYCL020W RRN5Q02983 363 aa1.23□□□□□ -2.21
YCL020WYCL020W KRE28Q04431 385 aa1.23□□□□□ -2.21
YCL020WYCL020W MED4Q12343 284 aa1.23□□□□□ -2.21
YCL020WYCL020W PDR18P53756 1333 aa1.22□□□□□ -2.21
YCL020WYCL020W PGD1P40356 397 aa1.22□□□□□ -2.21
YCL020WYCL020W MCM22P47167 239 aa1.22□□□□□ -2.21
YCL020WYCL020W ALG13P53178 202 aa1.22□□□□□ -2.21
YCL020WYCL020W LPP1Q04396 274 aa1.22□□□□□ -2.21
YCL020WYCL020W REP2P03872 296 aa1.21□□□□□ -2.22
YCL020WYCL020W RHO1P06780 209 aaKnown RBP1.21□□□□□ -2.22
YCL020WYCL020W BCY1P07278 416 aaKnown RBP1.21□□□□□ -2.22
YCL020WYCL020W YLR156WP0CE96 114 aa1.21□□□□□ -2.22
YCL020WYCL020W YLR159WP0CE97 114 aa1.21□□□□□ -2.22
YCL020WYCL020W YLR161WP0CE98 114 aa1.21□□□□□ -2.22
YCL020WYCL020W FPR1P20081 114 aaKnown RBP1.21□□□□□ -2.22
YCL020WYCL020W FZF1P32805 299 aa1.21□□□□□ -2.22
YCL020WYCL020W SVP26P38869 228 aa1.21□□□□□ -2.22
YCL020WYCL020W FMC1P40491 155 aa1.21□□□□□ -2.22
YCL020WYCL020W NOP13P53883 403 aaKnown RBP RIP-Chip data1.21□□□□□ -2.22not detected
YCL020WYCL020W ABF2Q02486 183 aa1.21□□□□□ -2.22
YCL020WYCL020W GAS3Q03655 524 aa1.21□□□□□ -2.22
YCL020WYCL020W YMD8Q03697 442 aa1.21□□□□□ -2.22
YCL020WYCL020W DOG2P38773 246 aa1.2□□□□□ -2.22
YCL020WYCL020W YNL010WP53981 241 aaKnown RBP1.2□□□□□ -2.22
YCL020WYCL020W CDC28P00546 298 aaKnown RBP1.19□□□□□ -2.22
YCL020WYCL020W DBF2P22204 572 aa1.19□□□□□ -2.22
YCL020WYCL020W MIC12P38341 106 aa1.19□□□□□ -2.22
YCL020WYCL020W YNL217WP40152 326 aa1.19□□□□□ -2.22
YCL020WYCL020W ICE2P40499 491 aa1.19□□□□□ -2.22
YCL020WYCL020W LIA1P47120 325 aaKnown RBP1.19□□□□□ -2.22
YCL020WYCL020W NUP84P52891 726 aa1.19□□□□□ -2.22
YCL020WYCL020W YIL177CP40434 1758 aa1.19□□□□□ -2.22
YCL020WYCL020W YJL225CP40889 1758 aa1.19□□□□□ -2.22
YCL020WYCL020W QCR8P08525 94 aa1.18□□□□□ -2.22
YCL020WYCL020W URA6P15700 204 aa1.18□□□□□ -2.22
YCL020WYCL020W ATG22P25568 528 aa1.18□□□□□ -2.22
YCL020WYCL020W RPL13BP40212 199 aaKnown RBP1.18□□□□□ -2.22
YCL020WYCL020W SNZ1Q03148 297 aa1.18□□□□□ -2.22
YCL020WYCL020W RPL13AQ12690 199 aaPredicted RBP1.18□□□□□ -2.22
YCL020WYCL020W TDA8Q6B2U8 126 aa1.18□□□□□ -2.22
YCL020WYCL020W UPS2P35200 230 aa1.17□□□□□ -2.22
YCL020WYCL020W GAA1P39012 614 aa1.17□□□□□ -2.22
YCL020WYCL020W RPC17P47076 161 aa1.17□□□□□ -2.22
YCL020WYCL020W EAF6P47128 113 aa1.17□□□□□ -2.22
YCL020WYCL020W CDC123Q05791 360 aa1.17□□□□□ -2.22
YCL020WYCL020W POP4P38336 279 aa1.16□□□□□ -2.22
YCL020WYCL020W DOC1P53068 250 aa1.16□□□□□ -2.22
YCL020WYCL020W TUS1Q06412 1307 aa1.16□□□□□ -2.22
YCL020WYCL020W SPT3P06844 337 aa1.15□□□□□ -2.22
YCL020WYCL020W UTP30P36144 274 aaKnown RBP1.15□□□□□ -2.22
YCL020WYCL020W MRPL17P36528 281 aa1.15□□□□□ -2.22
YCL020WYCL020W YLR283WQ05867 314 aa1.15□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 25.7 ms