RNA–Protein interactions for RNA: YBR236C

ABD1, Transcript of Methyltransferase, yeast

Gene ABD1, Length 1,311 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ABD1	YBR236C	YPR147C	Q06522	304 aa	Known RBP	3.02	□□□□□ -1.93
ABD1	YBR236C	MSH5	Q12175	901 aa		3.02	□□□□□ -1.93
ABD1	YBR236C	YBL008W-A	Q3E821	79 aa		3.02	□□□□□ -1.93
ABD1	YBR236C	FKS1	P38631	1876 aa	Known RBP	3.02	□□□□□ -1.93
ABD1	YBR236C	RAD10	P06838	210 aa		3.01	□□□□□ -1.93
ABD1	YBR236C	TCP1	P12612	559 aa	Known RBP	3.01	□□□□□ -1.93
ABD1	YBR236C	HOM6	P31116	359 aa	Known RBP	3.01	□□□□□ -1.93
ABD1	YBR236C	BMH2	P34730	273 aa	Known RBP	3.01	□□□□□ -1.93
ABD1	YBR236C	GLG2	P47011	380 aa		3.01	□□□□□ -1.93
ABD1	YBR236C	SSU72	P53538	206 aa	Predicted RBP	3.01	□□□□□ -1.93
ABD1	YBR236C	MRPL50	P53724	139 aa		3.01	□□□□□ -1.93
ABD1	YBR236C	MIX17	Q03667	156 aa		3.01	□□□□□ -1.93
ABD1	YBR236C	NUM1	Q00402	2748 aa		3	□□□□□ -1.93
ABD1	YBR236C	UTR5	P32630	166 aa		3	□□□□□ -1.93
ABD1	YBR236C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	3	□□□□□ -1.93	not detected
ABD1	YBR236C	CSM4	Q08955	156 aa		3	□□□□□ -1.93
ABD1	YBR236C	RUD3	Q12234	484 aa	Known RBP	3	□□□□□ -1.93
ABD1	YBR236C	YPR011C	Q12251	326 aa		3	□□□□□ -1.93
ABD1	YBR236C	NOT5	Q12514	560 aa	Predicted RBP	3	□□□□□ -1.93
ABD1	YBR236C	YKR104W	P0CE69	306 aa		2.99	□□□□□ -1.93
ABD1	YBR236C	GDH2	P33327	1092 aa	Known RBP	2.99	□□□□□ -1.93
ABD1	YBR236C	SGE1	P33335	543 aa		2.99	□□□□□ -1.93
ABD1	YBR236C	ECM13	P38195	257 aa		2.99	□□□□□ -1.93
ABD1	YBR236C	OPY1	P38271	328 aa		2.99	□□□□□ -1.93
ABD1	YBR236C	FZO1	P38297	855 aa		2.99	□□□□□ -1.93
ABD1	YBR236C	SSH1	P38353	490 aa	Known RBP	2.99	□□□□□ -1.93
ABD1	YBR236C	MDM34	P53083	459 aa		2.99	□□□□□ -1.93
ABD1	YBR236C	PAM18	Q07914	168 aa		2.99	□□□□□ -1.93
ABD1	YBR236C	COQ10	Q08058	207 aa		2.99	□□□□□ -1.93
ABD1	YBR236C	RRS1	Q08746	203 aa	Known RBP	2.99	□□□□□ -1.93
ABD1	YBR236C	ATG31	Q12421	196 aa		2.99	□□□□□ -1.93
ABD1	YBR236C	MSB2	P32334	1306 aa		2.99	□□□□□ -1.93
ABD1	YBR236C	PPH21	P23594	369 aa		2.98	□□□□□ -1.93
ABD1	YBR236C	NTG1	P31378	399 aa		2.98	□□□□□ -1.93
ABD1	YBR236C	SIP3	P38717	1229 aa		2.98	□□□□□ -1.93
ABD1	YBR236C	SNZ3	P43545	298 aa		2.98	□□□□□ -1.93
ABD1	YBR236C	LIA1	P47120	325 aa	Known RBP	2.98	□□□□□ -1.93
ABD1	YBR236C	RTC4	P53850	401 aa		2.98	□□□□□ -1.93
ABD1	YBR236C	CTF19	Q02732	369 aa		2.98	□□□□□ -1.93
ABD1	YBR236C	PET117	Q02771	107 aa		2.98	□□□□□ -1.93
ABD1	YBR236C	GOT1	Q03554	138 aa		2.98	□□□□□ -1.93
ABD1	YBR236C	YMR114C	Q04471	368 aa	Known RBP	2.98	□□□□□ -1.93
ABD1	YBR236C	YDR124W	Q04608	324 aa		2.98	□□□□□ -1.93
ABD1	YBR236C	RRP40	Q08285	240 aa	Known RBP	2.98	□□□□□ -1.93
ABD1	YBR236C	SNU23	Q12368	194 aa	Predicted RBP	2.98	□□□□□ -1.93
ABD1	YBR236C	GEP5	Q12393	293 aa		2.98	□□□□□ -1.93
ABD1	YBR236C	RIF1	P29539	1916 aa		2.98	□□□□□ -1.93
ABD1	YBR236C	EHD3	P28817	500 aa		2.97	□□□□□ -1.93
ABD1	YBR236C	MRPL39	P36533	70 aa		2.97	□□□□□ -1.93
ABD1	YBR236C	FMC1	P40491	155 aa		2.97	□□□□□ -1.93
ABD1	YBR236C	GON7	P46984	123 aa		2.97	□□□□□ -1.93
ABD1	YBR236C	RHO3	Q00245	231 aa	Known RBP	2.97	□□□□□ -1.93
ABD1	YBR236C	SRL4	Q03085	281 aa		2.97	□□□□□ -1.93
ABD1	YBR236C	GRH1	Q04410	372 aa	Known RBP	2.97	□□□□□ -1.93
ABD1	YBR236C	SPG4	Q04438	115 aa		2.97	□□□□□ -1.93
ABD1	YBR236C	YOR268C	Q08734	132 aa		2.97	□□□□□ -1.93
ABD1	YBR236C	YCT1	Q12235	531 aa		2.97	□□□□□ -1.93
ABD1	YBR236C	SEN1	Q00416	2231 aa	Known RBP	2.97	□□□□□ -1.93
ABD1	YBR236C	YBR096W	P38256	230 aa		2.96	□□□□□ -1.93
ABD1	YBR236C	GOS1	P38736	223 aa		2.96	□□□□□ -1.93
ABD1	YBR236C	MRH4	P53166	561 aa		2.96	□□□□□ -1.93
ABD1	YBR236C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	2.96	□□□□□ -1.93	not detected
ABD1	YBR236C	CDD1	Q06549	142 aa		2.96	□□□□□ -1.93
ABD1	YBR236C	MATALPHA2	P0CY08	210 aa		2.95	□□□□□ -1.94
ABD1	YBR236C	HMLALPHA2	P0CY09	210 aa		2.95	□□□□□ -1.94
ABD1	YBR236C	YHB1	P39676	399 aa	Known RBP	2.95	□□□□□ -1.94
ABD1	YBR236C	YGL034C	P53186	121 aa		2.95	□□□□□ -1.94
ABD1	YBR236C	SNZ2	P53824	298 aa		2.95	□□□□□ -1.94
ABD1	YBR236C	YLR179C	Q06252	201 aa	Known RBP	2.95	□□□□□ -1.94
ABD1	YBR236C	SYC1	Q08553	188 aa	Predicted RBP	2.95	□□□□□ -1.94
ABD1	YBR236C	DPM1	P14020	267 aa	Known RBP	2.94	□□□□□ -1.94
ABD1	YBR236C	SEC22	P22214	214 aa		2.94	□□□□□ -1.94
ABD1	YBR236C	RSM25	P40496	264 aa		2.94	□□□□□ -1.94
ABD1	YBR236C	JHD2	P47156	728 aa	Predicted RBP	2.94	□□□□□ -1.94
ABD1	YBR236C	KRE28	Q04431	385 aa		2.94	□□□□□ -1.94
ABD1	YBR236C	FUS2	Q05670	677 aa		2.94	□□□□□ -1.94
ABD1	YBR236C	YLR422W	Q06409	1932 aa		2.94	□□□□□ -1.94
ABD1	YBR236C	RDS3	Q06835	107 aa	Predicted RBP	2.94	□□□□□ -1.94
ABD1	YBR236C	GPM2	Q12008	311 aa		2.94	□□□□□ -1.94
ABD1	YBR236C	YCR016W	P25617	290 aa	Known RBP	2.93	□□□□□ -1.94
ABD1	YBR236C	YGP1	P38616	354 aa	Known RBP	2.93	□□□□□ -1.94
ABD1	YBR236C	THO1	P40040	218 aa	Known RBP	2.93	□□□□□ -1.94
ABD1	YBR236C	HOC1	P47124	396 aa		2.93	□□□□□ -1.94
ABD1	YBR236C	YJR079W	P47126	109 aa		2.93	□□□□□ -1.94
ABD1	YBR236C	SPO77	Q06134	477 aa		2.93	□□□□□ -1.94
ABD1	YBR236C	FMP27	Q06179	2628 aa		2.93	□□□□□ -1.94
ABD1	YBR236C	RPL26A	P05743	127 aa	Known RBP	2.93	□□□□□ -1.94
ABD1	YBR236C	SRB4	P32569	687 aa		2.93	□□□□□ -1.94
ABD1	YBR236C	MSN4	P33749	630 aa		2.93	□□□□□ -1.94
ABD1	YBR236C	KDX1	P36005	433 aa		2.93	□□□□□ -1.94
ABD1	YBR236C	YHR127W	P38833	243 aa	Known RBP	2.93	□□□□□ -1.94
ABD1	YBR236C	RPL26B	P53221	127 aa	Known RBP	2.93	□□□□□ -1.94
ABD1	YBR236C	EMP46	Q12396	444 aa		2.93	□□□□□ -1.94
ABD1	YBR236C	BEM2	P39960	2167 aa	Known RBP	2.92	□□□□□ -1.94
ABD1	YBR236C	LDB7	P38210	180 aa		2.92	□□□□□ -1.94
ABD1	YBR236C	AVT2	P39981	480 aa		2.92	□□□□□ -1.94
ABD1	YBR236C	COG3	P40094	801 aa		2.92	□□□□□ -1.94
ABD1	YBR236C	YER189W	P40104	122 aa		2.92	□□□□□ -1.94
ABD1	YBR236C	YJL016W	P47072	561 aa		2.92	□□□□□ -1.94
ABD1	YBR236C	DSK2	P48510	373 aa		2.92	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 25.6 ms