RNA–Protein interactions for RNA: YBR175W

SWD3, Transcript of Essential subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SWD3, Length 948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD3YBR175W INP1Q03694 420 aa2.36□□□□□ -2.03
SWD3YBR175W ARO80Q04052 950 aa2.36□□□□□ -2.03
SWD3YBR175W YMR315WQ04869 349 aaKnown RBP2.36□□□□□ -2.03
SWD3YBR175W YOL024WQ08172 172 aa2.36□□□□□ -2.03
SWD3YBR175W YOR283WQ12040 230 aaKnown RBP2.36□□□□□ -2.03
SWD3YBR175W TRM10Q12400 293 aa2.36□□□□□ -2.03
SWD3YBR175W YBL008W-AQ3E821 79 aa2.36□□□□□ -2.03
SWD3YBR175W IGO2Q9P305 131 aa2.36□□□□□ -2.03
SWD3YBR175W IQG1Q12280 1495 aa2.35□□□□□ -2.03
SWD3YBR175W SEC4P07560 215 aaKnown RBP2.35□□□□□ -2.03
SWD3YBR175W GRX2P17695 143 aaKnown RBP2.35□□□□□ -2.03
SWD3YBR175W ISY1P21374 235 aaPredicted RBP2.35□□□□□ -2.03
SWD3YBR175W TRX3P25372 127 aa2.35□□□□□ -2.03
SWD3YBR175W MGT1P26188 188 aa2.35□□□□□ -2.03
SWD3YBR175W ARO2P28777 376 aaKnown RBP2.35□□□□□ -2.03
SWD3YBR175W ERG2P32352 222 aa2.35□□□□□ -2.03
SWD3YBR175W TIP20P33891 701 aa2.35□□□□□ -2.03
SWD3YBR175W CLG1P35190 452 aa2.35□□□□□ -2.03
SWD3YBR175W SHE3P38272 425 aaKnown RBP2.35□□□□□ -2.03
SWD3YBR175W ARN2P38724 620 aa2.35□□□□□ -2.03
SWD3YBR175W MIG3P39943 394 aa2.35□□□□□ -2.03
SWD3YBR175W EDC2P40023 145 aaPredicted RBP2.35□□□□□ -2.03
SWD3YBR175W AVT6P40074 448 aa2.35□□□□□ -2.03
SWD3YBR175W PDS1P40316 373 aaPredicted RBP2.35□□□□□ -2.03
SWD3YBR175W SOK1P40317 901 aa2.35□□□□□ -2.03
SWD3YBR175W YFH7P43591 353 aa2.35□□□□□ -2.03
SWD3YBR175W FAR7P43592 221 aa2.35□□□□□ -2.03
SWD3YBR175W AIM25P47140 327 aa2.35□□□□□ -2.03
SWD3YBR175W SBH2P52871 88 aa2.35□□□□□ -2.03
SWD3YBR175W ERV29P53337 310 aa2.35□□□□□ -2.03
SWD3YBR175W PET191Q02772 108 aa2.35□□□□□ -2.03
SWD3YBR175W YMR244WQ04018 355 aa2.35□□□□□ -2.03
SWD3YBR175W API2Q04413 109 aa2.35□□□□□ -2.03
SWD3YBR175W PAL1Q05518 499 aaKnown RBP2.35□□□□□ -2.03
SWD3YBR175W NSL1Q12143 216 aa2.35□□□□□ -2.03
SWD3YBR175W YLR050CQ12155 161 aaKnown RBP2.35□□□□□ -2.03
SWD3YBR175W SWI1P09547 1314 aa2.35□□□□□ -2.03
SWD3YBR175W TEL1P38110 2787 aa2.35□□□□□ -2.03
SWD3YBR175W SNT2P53127 1403 aa2.34□□□□□ -2.03
SWD3YBR175W SMC4Q12267 1418 aa2.34□□□□□ -2.03
SWD3YBR175W YHR139C-AO13536 103 aa2.34□□□□□ -2.03
SWD3YBR175W RPS28BP0C0X0 67 aaKnown RBP2.34□□□□□ -2.03
SWD3YBR175W SPT15P13393 240 aaKnown RBP2.34□□□□□ -2.03
SWD3YBR175W BMH1P29311 267 aaKnown RBP2.34□□□□□ -2.03
SWD3YBR175W OM14P38325 134 aa2.34□□□□□ -2.03
SWD3YBR175W RRG9P40156 214 aa2.34□□□□□ -2.03
SWD3YBR175W ICE2P40499 491 aa2.34□□□□□ -2.03
SWD3YBR175W IGD1P43598 195 aa2.34□□□□□ -2.03
SWD3YBR175W SWT21P53873 357 aaPredicted RBP2.34□□□□□ -2.03
SWD3YBR175W LSM7P53905 115 aaKnown RBP2.34□□□□□ -2.03
SWD3YBR175W VHS1Q03785 461 aa2.34□□□□□ -2.03
SWD3YBR175W GGA1Q06336 557 aa2.34□□□□□ -2.03
SWD3YBR175W YLR053CQ12026 108 aa2.34□□□□□ -2.03
SWD3YBR175W MDM32Q12171 622 aa2.34□□□□□ -2.03
SWD3YBR175W YPR011CQ12251 326 aa2.34□□□□□ -2.03
SWD3YBR175W RPS28AQ3E7X9 67 aaPredicted RBP2.34□□□□□ -2.03
SWD3YBR175W YBR298C-AQ8TGK4 73 aa2.34□□□□□ -2.03
SWD3YBR175W STU1P38198 1513 aa2.33□□□□□ -2.04
SWD3YBR175W ARO7P32178 256 aa2.33□□□□□ -2.04
SWD3YBR175W PTM1P32857 523 aa2.33□□□□□ -2.04
SWD3YBR175W ZRT3P34240 503 aa2.33□□□□□ -2.04
SWD3YBR175W YHI9P38765 294 aa2.33□□□□□ -2.04
SWD3YBR175W SPL2P38839 148 aa2.33□□□□□ -2.04
SWD3YBR175W EDC3P39998 551 aaKnown RBP2.33□□□□□ -2.04
SWD3YBR175W CAT5P41735 233 aa2.33□□□□□ -2.04
SWD3YBR175W PRM10P42946 383 aa2.33□□□□□ -2.04
SWD3YBR175W RPE1P46969 238 aa2.33□□□□□ -2.04
SWD3YBR175W ILM1P47155 203 aa2.33□□□□□ -2.04
SWD3YBR175W UBC12P52491 188 aa2.33□□□□□ -2.04
SWD3YBR175W PRM8P53174 237 aa2.33□□□□□ -2.04
SWD3YBR175W NQM1P53228 333 aaPredicted RBP2.33□□□□□ -2.04
SWD3YBR175W YNL184CP53876 108 aa2.33□□□□□ -2.04
SWD3YBR175W EMI1Q04406 187 aa2.33□□□□□ -2.04
SWD3YBR175W YLR179CQ06252 201 aaKnown RBP2.33□□□□□ -2.04
SWD3YBR175W TIM22Q12328 207 aa2.33□□□□□ -2.04
SWD3YBR175W EMP46Q12396 444 aa2.33□□□□□ -2.04
SWD3YBR175W LSO2Q3E772 92 aaKnown RBP2.33□□□□□ -2.04
SWD3YBR175W TY2B-LR1P0C2J3 1770 aa2.33□□□□□ -2.04
SWD3YBR175W TY2B-FP0CX63 1770 aa2.33□□□□□ -2.04
SWD3YBR175W TY2B-GR2P0CX64 1770 aa2.33□□□□□ -2.04
SWD3YBR175W TY2B-CP25384 1770 aa2.33□□□□□ -2.04
SWD3YBR175W TY2B-DR2Q03494 1770 aa2.33□□□□□ -2.04
SWD3YBR175W TY1B-DR1Q03855 1755 aa2.33□□□□□ -2.04
SWD3YBR175W TY2B-DR3Q07791 1770 aaKnown RBP2.33□□□□□ -2.04
SWD3YBR175W TY2B-OR1Q12113 1770 aa2.33□□□□□ -2.04
SWD3YBR175W TY2B-DR1Q12472 1770 aa2.33□□□□□ -2.04
SWD3YBR175W TY2B-OR2Q12501 1770 aa2.33□□□□□ -2.04
SWD3YBR175W SSN2P38931 1420 aa2.33□□□□□ -2.04
SWD3YBR175W TSC11P40061 1430 aa2.33□□□□□ -2.04
SWD3YBR175W PDR5P33302 1511 aaKnown RBP2.32□□□□□ -2.04
SWD3YBR175W IPP1P00817 287 aaKnown RBP2.32□□□□□ -2.04
SWD3YBR175W MDH3P32419 343 aaKnown RBP RIP-Chip data2.32□□□□□ -2.04not detected
SWD3YBR175W TCA17P32613 152 aa2.32□□□□□ -2.04
SWD3YBR175W NUF2P33895 451 aa2.32□□□□□ -2.04
SWD3YBR175W CSG2P35206 410 aa2.32□□□□□ -2.04
SWD3YBR175W SMP1P38128 452 aa2.32□□□□□ -2.04
SWD3YBR175W SSH1P38353 490 aaKnown RBP2.32□□□□□ -2.04
SWD3YBR175W DOG1P38774 246 aa2.32□□□□□ -2.04
SWD3YBR175W NVJ1P38881 321 aa2.32□□□□□ -2.04
SWD3YBR175W GIM4P40005 111 aaKnown RBP2.32□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 19.3 ms