RNA–Protein interactions for RNA: YBR082C

UBC4, Transcript of Ubiquitin-conjugating enzyme (E2), yeast

Gene UBC4, Length 447 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC4	YBR082C	VMA7	P39111	118 aa		4.62	□□□□□ -1.67
UBC4	YBR082C	SIT1	P39980	628 aa		4.62	□□□□□ -1.67
UBC4	YBR082C	CCS1	P40202	249 aa	Known RBP	4.62	□□□□□ -1.67
UBC4	YBR082C	BMT5	P40493	336 aa		4.62	□□□□□ -1.67
UBC4	YBR082C	SYG1	P40528	902 aa		4.62	□□□□□ -1.67
UBC4	YBR082C	HNT2	P49775	206 aa		4.62	□□□□□ -1.67
UBC4	YBR082C	TAF4	P50105	388 aa		4.62	□□□□□ -1.67
UBC4	YBR082C	NIF3	P53081	288 aa		4.62	□□□□□ -1.67
UBC4	YBR082C	SLX9	P53251	210 aa	Predicted RBP	4.62	□□□□□ -1.67
UBC4	YBR082C	CRZ1	P53968	678 aa		4.62	□□□□□ -1.67
UBC4	YBR082C	YPL067C	Q02754	198 aa		4.62	□□□□□ -1.67
UBC4	YBR082C	YDR286C	Q05530	114 aa		4.62	□□□□□ -1.67
UBC4	YBR082C	GRC3	Q07845	632 aa		4.62	□□□□□ -1.67
UBC4	YBR082C	FCY22	Q12119	530 aa		4.62	□□□□□ -1.67
UBC4	YBR082C	ATG40	Q99325	256 aa		4.62	□□□□□ -1.67
UBC4	YBR082C	IRA1	P18963	3092 aa		4.61	□□□□□ -1.67
UBC4	YBR082C	YBR056W-A	I2HB52	66 aa		4.61	□□□□□ -1.67
UBC4	YBR082C	RPS23A	P0CX29	145 aa	Known RBP	4.61	□□□□□ -1.67
UBC4	YBR082C	RPS23B	P0CX30	145 aa		4.61	□□□□□ -1.67
UBC4	YBR082C	RPI1	P23250	407 aa	Known RBP	4.61	□□□□□ -1.67
UBC4	YBR082C	MIR1	P23641	311 aa	Known RBP	4.61	□□□□□ -1.67
UBC4	YBR082C	YCR061W	P25639	631 aa		4.61	□□□□□ -1.67
UBC4	YBR082C	TIP1	P27654	210 aa	Predicted RBP	4.61	□□□□□ -1.67
UBC4	YBR082C	IMP1	P28627	190 aa		4.61	□□□□□ -1.67
UBC4	YBR082C	MRP20	P32387	263 aa		4.61	□□□□□ -1.67
UBC4	YBR082C	EDS1	P38073	919 aa		4.61	□□□□□ -1.67
UBC4	YBR082C	YHL037C	P38733	133 aa		4.61	□□□□□ -1.67
UBC4	YBR082C	LNP1	P38878	278 aa		4.61	□□□□□ -1.67
UBC4	YBR082C	YMR144W	P40214	342 aa	Known RBP	4.61	□□□□□ -1.67
UBC4	YBR082C	TOK1	P40310	691 aa		4.61	□□□□□ -1.67
UBC4	YBR082C	YIR035C	P40579	254 aa		4.61	□□□□□ -1.67
UBC4	YBR082C	IRC24	P40580	263 aa		4.61	□□□□□ -1.67
UBC4	YBR082C	RPA34	P47006	233 aa	Predicted RBP	4.61	□□□□□ -1.67
UBC4	YBR082C	SNX4	P47057	423 aa		4.61	□□□□□ -1.67
UBC4	YBR082C	SOL1	P50278	321 aa		4.61	□□□□□ -1.67
UBC4	YBR082C	MEH1	Q02205	184 aa		4.61	□□□□□ -1.67
UBC4	YBR082C	THI74	Q04083	370 aa		4.61	□□□□□ -1.67
UBC4	YBR082C	TSA2	Q04120	196 aa		4.61	□□□□□ -1.67
UBC4	YBR082C	UPS1	Q05776	175 aa		4.61	□□□□□ -1.67
UBC4	YBR082C	MPD1	Q12404	318 aa	Known RBP	4.61	□□□□□ -1.67
UBC4	YBR082C	WHI5	Q12416	295 aa		4.61	□□□□□ -1.67
UBC4	YBR082C	YLR365W	Q7LIF2	110 aa		4.61	□□□□□ -1.67
UBC4	YBR082C	QCR2	P07257	368 aa		4.6	□□□□□ -1.67
UBC4	YBR082C	RPB7	P34087	171 aa		4.6	□□□□□ -1.67
UBC4	YBR082C	SWD2	P36104	329 aa	Predicted RBP	4.6	□□□□□ -1.67
UBC4	YBR082C	SWD3	P38123	315 aa		4.6	□□□□□ -1.67
UBC4	YBR082C	YPC1	P38298	316 aa		4.6	□□□□□ -1.67
UBC4	YBR082C	NTC20	P38302	140 aa	Predicted RBP	4.6	□□□□□ -1.67
UBC4	YBR082C	PRS3	P38689	320 aa	Known RBP	4.6	□□□□□ -1.67
UBC4	YBR082C	GEP4	P38812	185 aa		4.6	□□□□□ -1.67
UBC4	YBR082C	NRG1	Q03125	231 aa		4.6	□□□□□ -1.67
UBC4	YBR082C	NOC4	Q06512	552 aa	Predicted RBP	4.6	□□□□□ -1.67
UBC4	YBR082C	MRL1	Q06815	381 aa		4.6	□□□□□ -1.67
UBC4	YBR082C	FRE8	Q12209	686 aa		4.6	□□□□□ -1.67
UBC4	YBR082C	BBP1	Q12365	385 aa		4.6	□□□□□ -1.67
UBC4	YBR082C	TFC7	Q12415	435 aa		4.6	□□□□□ -1.67
UBC4	YBR082C	ATG31	Q12421	196 aa		4.6	□□□□□ -1.67
UBC4	YBR082C	FMP16	Q12497	93 aa		4.6	□□□□□ -1.67
UBC4	YBR082C	YJR112W-A	Q3E743	109 aa		4.6	□□□□□ -1.67
UBC4	YBR082C	YML003W	P0CF16	290 aa		4.59	□□□□□ -1.67
UBC4	YBR082C	FUS3	P16892	353 aa	Known RBP	4.59	□□□□□ -1.67
UBC4	YBR082C	PDC2	P32896	925 aa		4.59	□□□□□ -1.67
UBC4	YBR082C	PAC2	P39937	518 aa		4.59	□□□□□ -1.67
UBC4	YBR082C	YJR111C	P47148	283 aa	Known RBP	4.59	□□□□□ -1.67
UBC4	YBR082C	DID2	P69771	204 aa		4.59	□□□□□ -1.67
UBC4	YBR082C	SKO1	Q02100	647 aa		4.59	□□□□□ -1.67
UBC4	YBR082C	VPS28	Q02767	242 aa		4.59	□□□□□ -1.67
UBC4	YBR082C	YMR279C	Q03263	540 aa		4.59	□□□□□ -1.67
UBC4	YBR082C	API2	Q04413	109 aa		4.59	□□□□□ -1.67
UBC4	YBR082C	FIT1	Q04433	528 aa		4.59	□□□□□ -1.67
UBC4	YBR082C	YDR114C	Q04597	100 aa		4.59	□□□□□ -1.67
UBC4	YBR082C	LIP2	Q06005	328 aa		4.59	□□□□□ -1.67
UBC4	YBR082C	ORM2	Q06144	216 aa		4.59	□□□□□ -1.67
UBC4	YBR082C	ANT1	Q06497	328 aa		4.59	□□□□□ -1.67
UBC4	YBR082C	YCT1	Q12235	531 aa		4.59	□□□□□ -1.67
UBC4	YBR082C	YLR146W-A	Q2V2P1	62 aa		4.59	□□□□□ -1.67
UBC4	YBR082C	YOR192C-C	Q3E736	78 aa		4.59	□□□□□ -1.67
UBC4	YBR082C	YPR108W-A	Q3E7B3	70 aa		4.59	□□□□□ -1.67
UBC4	YBR082C	SEC22	P22214	214 aa		4.58	□□□□□ -1.68
UBC4	YBR082C	MNS1	P32906	549 aa		4.58	□□□□□ -1.68
UBC4	YBR082C	YKL107W	P34251	309 aa		4.58	□□□□□ -1.68
UBC4	YBR082C	YUH1	P35127	236 aa		4.58	□□□□□ -1.68
UBC4	YBR082C	YGP1	P38616	354 aa	Known RBP	4.58	□□□□□ -1.68
UBC4	YBR082C	OSH7	P38755	437 aa		4.58	□□□□□ -1.68
UBC4	YBR082C	POP2	P39008	433 aa		4.58	□□□□□ -1.68
UBC4	YBR082C	RMD6	P39975	231 aa		4.58	□□□□□ -1.68
UBC4	YBR082C	YER121W	P40076	114 aa		4.58	□□□□□ -1.68
UBC4	YBR082C	RPL13B	P40212	199 aa	Known RBP	4.58	□□□□□ -1.68
UBC4	YBR082C	GON7	P46984	123 aa		4.58	□□□□□ -1.68
UBC4	YBR082C	TAD2	P47058	250 aa		4.58	□□□□□ -1.68
UBC4	YBR082C	PKP2	P53170	491 aa		4.58	□□□□□ -1.68
UBC4	YBR082C	PNC1	P53184	216 aa	Known RBP	4.58	□□□□□ -1.68
UBC4	YBR082C	ACT1	P60010	375 aa	Known RBP	4.58	□□□□□ -1.68
UBC4	YBR082C	SED1	Q01589	338 aa		4.58	□□□□□ -1.68
UBC4	YBR082C	DPB4	Q04603	196 aa	Known RBP	4.58	□□□□□ -1.68
UBC4	YBR082C	RRT7	Q07829	113 aa		4.58	□□□□□ -1.68
UBC4	YBR082C	GAT3	Q07928	141 aa		4.58	□□□□□ -1.68
UBC4	YBR082C	YOL029C	Q08187	201 aa		4.58	□□□□□ -1.68
UBC4	YBR082C	ALG6	Q12001	544 aa	Known RBP	4.58	□□□□□ -1.68
UBC4	YBR082C	FCF2	Q12035	217 aa	Predicted RBP	4.58	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 103.2 ms