RNA–Protein interactions for RNA: ENST00000547926.6

CEP290-204, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,122 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-204ENST00000547926 SIK3Q9Y2K2 1263 aa3.14□□□□□ -1.91
CEP290-204ENST00000547926 PCDHGA9Q9Y5G4 932 aaKnown RBP3.14□□□□□ -1.91
CEP290-204ENST00000547926 PCDHGA8Q9Y5G5 932 aa3.14□□□□□ -1.91
CEP290-204ENST00000547926 PCDHGA7Q9Y5G6 932 aa3.14□□□□□ -1.91
CEP290-204ENST00000547926 PCDHGA6Q9Y5G7 932 aa3.14□□□□□ -1.91
CEP290-204ENST00000547926 PCDHGA3Q9Y5H0 932 aa3.14□□□□□ -1.91
CEP290-204ENST00000547926 TRIM75PA6NK02 468 aa3.14□□□□□ -1.91
CEP290-204ENST00000547926 PHF2O75151 1096 aa3.14□□□□□ -1.91
CEP290-204ENST00000547926 MYBL2P10244 700 aa3.14□□□□□ -1.91
CEP290-204ENST00000547926 ECHS1P30084 290 aa3.14□□□□□ -1.91
CEP290-204ENST00000547926 PTPN7P35236 360 aa3.14□□□□□ -1.91
CEP290-204ENST00000547926 SREBF1P36956 1147 aa3.14□□□□□ -1.91
CEP290-204ENST00000547926 SLC6A9P48067 706 aa3.14□□□□□ -1.91
CEP290-204ENST00000547926 VPS72Q15906 364 aa3.14□□□□□ -1.91
CEP290-204ENST00000547926 ERCC6LQ2NKX8 1250 aa3.14□□□□□ -1.91
CEP290-204ENST00000547926 DOK3Q7L591 496 aa3.14□□□□□ -1.91
CEP290-204ENST00000547926 GPRIN1Q7Z2K8 1008 aa3.14□□□□□ -1.91
CEP290-204ENST00000547926 AMOTL1Q8IY63 956 aa3.14□□□□□ -1.91
CEP290-204ENST00000547926 RNF169Q8NCN4 708 aa3.14□□□□□ -1.91
CEP290-204ENST00000547926 OR7D4Q8NG98 312 aa3.14□□□□□ -1.91
CEP290-204ENST00000547926 SPATA3Q8NHX4 192 aa3.14□□□□□ -1.91
CEP290-204ENST00000547926 JADE3Q92613 823 aa3.14□□□□□ -1.91
CEP290-204ENST00000547926 PAWRQ96IZ0 340 aaKnown RBP3.14□□□□□ -1.91
CEP290-204ENST00000547926 PDCD2LQ9BRP1 358 aa3.14□□□□□ -1.91
CEP290-204ENST00000547926 SPON1Q9HCB6 807 aa3.14□□□□□ -1.91
CEP290-204ENST00000547926 MKS1Q9NXB0 559 aa3.14□□□□□ -1.91
CEP290-204ENST00000547926 TUBD1Q9UJT1 453 aa3.14□□□□□ -1.91
CEP290-204ENST00000547926 DNM3Q9UQ16 869 aa3.14□□□□□ -1.91
CEP290-204ENST00000547926 HDAC5Q9UQL6 1122 aa3.14□□□□□ -1.91
CEP290-204ENST00000547926 LRP12Q9Y561 859 aa3.14□□□□□ -1.91
CEP290-204ENST00000547926 ATRNL1Q5VV63 1379 aa3.14□□□□□ -1.91
CEP290-204ENST00000547926 LOC105371045A0A1W2PR82 267 aa3.13□□□□□ -1.91
CEP290-204ENST00000547926 TBKBP1A7MCY6 615 aa3.13□□□□□ -1.91
CEP290-204ENST00000547926 FZD9O00144 591 aa3.13□□□□□ -1.91
CEP290-204ENST00000547926 PPFIA4O75335 1185 aa3.13□□□□□ -1.91
CEP290-204ENST00000547926 ALOX15P16050 662 aaPredicted RBP3.13□□□□□ -1.91
CEP290-204ENST00000547926 FPR1P21462 350 aa3.13□□□□□ -1.91
CEP290-204ENST00000547926 OCA2Q04671 838 aa3.13□□□□□ -1.91
CEP290-204ENST00000547926 PCBP2Q15366 365 aaKnown RBP eCLIP3.13□□□□□ -1.91
CEP290-204ENST00000547926 PDCD4Q53EL6 469 aaKnown RBP3.13□□□□□ -1.91
CEP290-204ENST00000547926 FAM177A1Q8N128 213 aaPredicted RBP3.13□□□□□ -1.91
CEP290-204ENST00000547926 PQLC1Q8N2U9 271 aa3.13□□□□□ -1.91
CEP290-204ENST00000547926 FAXDC2Q96IV6 333 aa3.13□□□□□ -1.91
CEP290-204ENST00000547926 UHRF1Q96T88 793 aaPredicted RBP3.13□□□□□ -1.91
CEP290-204ENST00000547926 ADI1Q9BV57 179 aa3.13□□□□□ -1.91
CEP290-204ENST00000547926 BCO1Q9HAY6 547 aa3.13□□□□□ -1.91
CEP290-204ENST00000547926 MTMR4Q9NYA4 1195 aa3.13□□□□□ -1.91
CEP290-204ENST00000547926 TNKSO95271 1327 aa3.13□□□□□ -1.91
CEP290-204ENST00000547926 PNPLA7Q6ZV29 1317 aa3.13□□□□□ -1.91
CEP290-204ENST00000547926 WASHC2CQ9Y4E1 1318 aa3.13□□□□□ -1.91
CEP290-204ENST00000547926 RNASET2O00584 256 aaKnown RBP3.13□□□□□ -1.91
CEP290-204ENST00000547926 HSP90B1P14625 803 aaKnown RBP3.13□□□□□ -1.91
CEP290-204ENST00000547926 C5AR1P21730 350 aa3.13□□□□□ -1.91
CEP290-204ENST00000547926 PCSK1P29120 753 aa3.13□□□□□ -1.91
CEP290-204ENST00000547926 PER3P56645 1201 aa3.13□□□□□ -1.91
CEP290-204ENST00000547926 GUCY1B3Q02153 619 aa3.13□□□□□ -1.91
CEP290-204ENST00000547926 MGAT2Q10469 447 aa3.13□□□□□ -1.91
CEP290-204ENST00000547926 ZNF169Q14929 603 aaPredicted RBP3.13□□□□□ -1.91
CEP290-204ENST00000547926 ACAP2Q15057 778 aa3.13□□□□□ -1.91
CEP290-204ENST00000547926 FAM47AQ5JRC9 791 aa3.13□□□□□ -1.91
CEP290-204ENST00000547926 AFMIDQ63HM1 303 aa3.13□□□□□ -1.91
CEP290-204ENST00000547926 ZNF572Q7Z3I7 529 aaPredicted RBP3.13□□□□□ -1.91
CEP290-204ENST00000547926 DPF1Q92782 380 aa3.13□□□□□ -1.91
CEP290-204ENST00000547926 RAB24Q969Q5 203 aa3.13□□□□□ -1.91
CEP290-204ENST00000547926 SMAD5Q99717 465 aaKnown RBP3.13□□□□□ -1.91
CEP290-204ENST00000547926 DUSP26Q9BV47 211 aa3.13□□□□□ -1.91
CEP290-204ENST00000547926 INTUQ9ULD6 942 aa3.13□□□□□ -1.91
CEP290-204ENST00000547926 ZBTB21Q9ULJ3 1066 aa3.13□□□□□ -1.91
CEP290-204ENST00000547926 CXorf49A8MYA2 514 aaPredicted RBP3.12□□□□□ -1.91
CEP290-204ENST00000547926 PRR5-ARHGAP8B1AHC4 643 aa3.12□□□□□ -1.91
CEP290-204ENST00000547926 B5MCH6 92 aa3.12□□□□□ -1.91
CEP290-204ENST00000547926 XPOTO43592 962 aaKnown RBP3.12□□□□□ -1.91
CEP290-204ENST00000547926 NDUFS2O75306 463 aa3.12□□□□□ -1.91
CEP290-204ENST00000547926 RBP3P10745 1247 aa3.12□□□□□ -1.91
CEP290-204ENST00000547926 ITGAMP11215 1152 aa3.12□□□□□ -1.91
CEP290-204ENST00000547926 ZSCAN20P17040 1043 aaPredicted RBP3.12□□□□□ -1.91
CEP290-204ENST00000547926 GUCY1A2P33402 732 aa3.12□□□□□ -1.91
CEP290-204ENST00000547926 ALDH1A3P47895 512 aa3.12□□□□□ -1.91
CEP290-204ENST00000547926 FLT3LGP49771 235 aa3.12□□□□□ -1.91
CEP290-204ENST00000547926 ODF1Q14990 250 aa3.12□□□□□ -1.91
CEP290-204ENST00000547926 PTPROQ16827 1216 aa3.12□□□□□ -1.91
CEP290-204ENST00000547926 BMT2Q1RMZ1 405 aa3.12□□□□□ -1.91
CEP290-204ENST00000547926 METTL24Q5JXM2 366 aa3.12□□□□□ -1.91
CEP290-204ENST00000547926 ZNF788Q6ZQV5 615 aa3.12□□□□□ -1.91
CEP290-204ENST00000547926 ZGPATQ8N5A5 531 aaKnown RBP3.12□□□□□ -1.91
CEP290-204ENST00000547926 PDPRQ8NCN5 879 aa3.12□□□□□ -1.91
CEP290-204ENST00000547926 OR10H5Q8NGA6 315 aa3.12□□□□□ -1.91
CEP290-204ENST00000547926 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.12□□□□□ -1.91
CEP290-204ENST00000547926 CAGE1Q8TC20 777 aa3.12□□□□□ -1.91
CEP290-204ENST00000547926 CCHCR1Q8TD31 782 aa3.12□□□□□ -1.91
CEP290-204ENST00000547926 NRG4Q8WWG1 115 aa3.12□□□□□ -1.91
CEP290-204ENST00000547926 TFAP2CQ92754 450 aa3.12□□□□□ -1.91
CEP290-204ENST00000547926 FUBP3Q96I24 572 aaKnown RBP eCLIP3.12□□□□□ -1.91
CEP290-204ENST00000547926 NEU1Q99519 415 aa3.12□□□□□ -1.91
CEP290-204ENST00000547926 MYOCQ99972 504 aa3.12□□□□□ -1.91
CEP290-204ENST00000547926 ASPSCR1Q9BZE9 553 aa3.12□□□□□ -1.91
CEP290-204ENST00000547926 ASB6Q9NWX5 421 aa3.12□□□□□ -1.91
CEP290-204ENST00000547926 AJAP1Q9UKB5 411 aaPredicted RBP3.12□□□□□ -1.91
CEP290-204ENST00000547926 ANKRD62A6NC57 917 aa3.11□□□□□ -1.91
CEP290-204ENST00000547926 KLHL33A6NCF5 533 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms