RNA–Protein interactions for RNA: ENST00000547926.6

CEP290-204, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,122 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-204ENST00000547926 AEBP2Q6ZN18 517 aaPredicted RBP21.11■□□□□ 0.97
CEP290-204ENST00000547926 CHIC1Q5VXU3 224 aa19.42■□□□□ 0.7
CEP290-204ENST00000547926 SENP3Q9H4L4 574 aaPredicted RBP17.8■□□□□ 0.44
CEP290-204ENST00000547926 PHF23Q9BUL5 403 aaPredicted RBP17.64■□□□□ 0.41
CEP290-204ENST00000547926 FOXD1Q16676 465 aa16.84■□□□□ 0.29
CEP290-204ENST00000547926 POTEDQ86YR6 584 aa16.3■□□□□ 0.2
CEP290-204ENST00000547926 MSH5O43196 834 aa15.7■□□□□ 0.1
CEP290-204ENST00000547926 PIAS4Q8N2W9 510 aaPredicted RBP15.55■□□□□ 0.08
CEP290-204ENST00000547926 PPP6R1Q9UPN7 881 aa15.51■□□□□ 0.07
CEP290-204ENST00000547926 ADRA2BP18089 450 aa15.38■□□□□ 0.05
CEP290-204ENST00000547926 PLPPR3Q6T4P5 718 aa15.22■□□□□ 0.03
CEP290-204ENST00000547926 MAPK8IP2Q13387 824 aaPredicted RBP14.32□□□□□ -0.12
CEP290-204ENST00000547926 DMRT2Q9Y5R5 561 aa14.1□□□□□ -0.15
CEP290-204ENST00000547926 CACNB1Q02641 598 aaPredicted RBP13.85□□□□□ -0.19
CEP290-204ENST00000547926 SCAF1Q9H7N4 1312 aaKnown RBP13.75□□□□□ -0.21
CEP290-204ENST00000547926 DCAF8L1A6NGE4 600 aa13.61□□□□□ -0.23
CEP290-204ENST00000547926 RNF39Q9H2S5 420 aa13.49□□□□□ -0.25
CEP290-204ENST00000547926 HOXD11P31277 338 aaPredicted RBP13.4□□□□□ -0.26
CEP290-204ENST00000547926 PPP4R3CPQ6ZMV5 832 aa13.37□□□□□ -0.27
CEP290-204ENST00000547926 C1QBPQ07021 282 aaKnown RBP13.15□□□□□ -0.3
CEP290-204ENST00000547926 CNKSR2Q8WXI2 1034 aa13.14□□□□□ -0.31
CEP290-204ENST00000547926 RNF216Q9NWF9 866 aaPredicted RBP13.14□□□□□ -0.31
CEP290-204ENST00000547926 DNAJC5BQ9UF47 199 aa12.85□□□□□ -0.35
CEP290-204ENST00000547926 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.76□□□□□ -0.37
CEP290-204ENST00000547926 POTEHQ6S545 545 aa12.64□□□□□ -0.39
CEP290-204ENST00000547926 NPM3O75607 178 aaKnown RBP12.59□□□□□ -0.39
CEP290-204ENST00000547926 SPINK5Q9NQ38 1064 aaPredicted RBP12.56□□□□□ -0.4
CEP290-204ENST00000547926 U3KPZ7 1027 aaPredicted RBP12.54□□□□□ -0.4
CEP290-204ENST00000547926 NCBP3Q53F19 620 aaKnown RBP12.53□□□□□ -0.4
CEP290-204ENST00000547926 DSG3P32926 999 aa12.51□□□□□ -0.41
CEP290-204ENST00000547926 CAPN15O75808 1086 aa12.43□□□□□ -0.42
CEP290-204ENST00000547926 ABCB7O75027 752 aa12.21□□□□□ -0.45
CEP290-204ENST00000547926 SLC4A2P04920 1241 aa12.2□□□□□ -0.46
CEP290-204ENST00000547926 TRHP20396 242 aaPredicted RBP12.17□□□□□ -0.46
CEP290-204ENST00000547926 KCNA4P22459 653 aa12.01□□□□□ -0.49
CEP290-204ENST00000547926 ZNF219Q9P2Y4 722 aaPredicted RBP11.96□□□□□ -0.5
CEP290-204ENST00000547926 CHRDL2Q6WN34 429 aa11.83□□□□□ -0.52
CEP290-204ENST00000547926 APLP2Q06481 763 aa11.77□□□□□ -0.52
CEP290-204ENST00000547926 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.74□□□□□ -0.53
CEP290-204ENST00000547926 HNRNPUL2Q1KMD3 747 aaKnown RBP11.74□□□□□ -0.53
CEP290-204ENST00000547926 POLA2Q14181 598 aa11.74□□□□□ -0.53
CEP290-204ENST00000547926 RBM42Q9BTD8 480 aaKnown RBP11.73□□□□□ -0.53
CEP290-204ENST00000547926 SAMD1Q6SPF0 538 aaPredicted RBP11.72□□□□□ -0.53
CEP290-204ENST00000547926 SP7Q8TDD2 431 aaPredicted RBP11.61□□□□□ -0.55
CEP290-204ENST00000547926 ATF5Q9Y2D1 282 aaPredicted RBP11.56□□□□□ -0.56
CEP290-204ENST00000547926 MYCNP04198 464 aaPredicted RBP11.51□□□□□ -0.57
CEP290-204ENST00000547926 PIP4P2Q8N4L2 257 aa11.49□□□□□ -0.57
CEP290-204ENST00000547926 REM2Q8IYK8 340 aaPredicted RBP11.44□□□□□ -0.58
CEP290-204ENST00000547926 AKT1S1Q96B36 256 aa11.44□□□□□ -0.58
CEP290-204ENST00000547926 OSCARQ8IYS5 282 aa11.42□□□□□ -0.58
CEP290-204ENST00000547926 EVX2Q03828 476 aa11.39□□□□□ -0.59
CEP290-204ENST00000547926 HAX1O00165 279 aa11.36□□□□□ -0.59
CEP290-204ENST00000547926 PITPNM1O00562 1244 aa11.36□□□□□ -0.59
CEP290-204ENST00000547926 FXR2P51116 673 aaKnown RBP eCLIP11.3□□□□□ -0.6
CEP290-204ENST00000547926 ZBTB12Q9Y330 459 aaPredicted RBP11.2□□□□□ -0.62
CEP290-204ENST00000547926 FOXD4L1Q9NU39 408 aa11.18□□□□□ -0.62
CEP290-204ENST00000547926 ZBTB22O15209 634 aa11.12□□□□□ -0.63
CEP290-204ENST00000547926 SLC4A1APQ9BWU0 796 aaKnown RBP11.12□□□□□ -0.63
CEP290-204ENST00000547926 PRKAR2AP13861 404 aaKnown RBP11.03□□□□□ -0.64
CEP290-204ENST00000547926 CLEC11AQ9Y240 323 aa10.98□□□□□ -0.65
CEP290-204ENST00000547926 C19orf67A6NJJ6 358 aa10.95□□□□□ -0.66
CEP290-204ENST00000547926 GABBR2O75899 941 aa10.94□□□□□ -0.66
CEP290-204ENST00000547926 MKRN4PQ13434 485 aaPredicted RBP10.94□□□□□ -0.66
CEP290-204ENST00000547926 SPDYE2BA6NHP3 402 aa10.93□□□□□ -0.66
CEP290-204ENST00000547926 SPDYE6P0CI01 402 aa10.93□□□□□ -0.66
CEP290-204ENST00000547926 SPDYE2Q495Y8 402 aa10.93□□□□□ -0.66
CEP290-204ENST00000547926 CHADLQ6NUI6 762 aa10.92□□□□□ -0.66
CEP290-204ENST00000547926 LHX8Q68G74 356 aa10.9□□□□□ -0.67
CEP290-204ENST00000547926 SPDYE1Q8NFV5 336 aaPredicted RBP10.84□□□□□ -0.67
CEP290-204ENST00000547926 POTEIP0CG38 1075 aa10.82□□□□□ -0.68
CEP290-204ENST00000547926 FBLN2P98095 1184 aa10.81□□□□□ -0.68
CEP290-204ENST00000547926 SSUH2Q9Y2M2 353 aa10.81□□□□□ -0.68
CEP290-204ENST00000547926 ZNF692Q9BU19 519 aaPredicted RBP10.8□□□□□ -0.68
CEP290-204ENST00000547926 ATXN8OSP0DMR3 200 aa10.78□□□□□ -0.68
CEP290-204ENST00000547926 PABPN1Q86U42 306 aaKnown RBP eCLIP10.67□□□□□ -0.7
CEP290-204ENST00000547926 PRR29P0C7W0 189 aa10.66□□□□□ -0.7
CEP290-204ENST00000547926 CD44P16070 742 aaKnown RBP10.63□□□□□ -0.71
CEP290-204ENST00000547926 PLSCR2Q9NRY7 297 aa10.62□□□□□ -0.71
CEP290-204ENST00000547926 FARP1Q9Y4F1 1045 aaPredicted RBP10.58□□□□□ -0.72
CEP290-204ENST00000547926 POTEB2H3BUK9 544 aa10.49□□□□□ -0.73
CEP290-204ENST00000547926 DCBLD2Q96PD2 775 aa10.46□□□□□ -0.74
CEP290-204ENST00000547926 OTUD5Q96G74 571 aa10.45□□□□□ -0.74
CEP290-204ENST00000547926 GALR2O43603 387 aaPredicted RBP10.45□□□□□ -0.74
CEP290-204ENST00000547926 ZRANB1Q9UGI0 708 aa10.42□□□□□ -0.74
CEP290-204ENST00000547926 ZNF579Q8NAF0 562 aaKnown RBP10.4□□□□□ -0.74
CEP290-204ENST00000547926 CREBZFQ9NS37 354 aa10.38□□□□□ -0.75
CEP290-204ENST00000547926 PELP1Q8IZL8 1130 aaKnown RBP10.34□□□□□ -0.75
CEP290-204ENST00000547926 PHF12Q96QT6 1004 aa10.33□□□□□ -0.76
CEP290-204ENST00000547926 POTEMA6NI47 508 aa10.31□□□□□ -0.76
CEP290-204ENST00000547926 CLCN6P51797 869 aa10.3□□□□□ -0.76
CEP290-204ENST00000547926 POTEJP0CG39 1038 aa10.27□□□□□ -0.77
CEP290-204ENST00000547926 POTEGQ6S5H5 508 aa10.26□□□□□ -0.77
CEP290-204ENST00000547926 MNX1P50219 401 aaPredicted RBP10.19□□□□□ -0.78
CEP290-204ENST00000547926 LCE2DQ5TA82 110 aaPredicted RBP10.18□□□□□ -0.78
CEP290-204ENST00000547926 MS4A3Q96HJ5 214 aa10.14□□□□□ -0.79
CEP290-204ENST00000547926 METRNQ9UJH8 293 aa10.13□□□□□ -0.79
CEP290-204ENST00000547926 CSRNP3Q8WYN3 585 aa10.12□□□□□ -0.79
CEP290-204ENST00000547926 ATMINO43313 823 aaPredicted RBP10.1□□□□□ -0.79
CEP290-204ENST00000547926 ASTLQ6HA08 431 aaPredicted RBP10.09□□□□□ -0.79
CEP290-204ENST00000547926 STAG3Q9UJ98 1225 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms