RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 LACTBL1A8MY62 500 aa26.03■■□□□ 1.76
PFDN2-201ENST00000368010 XPOTO43592 962 aaKnown RBP26.03■■□□□ 1.76
PFDN2-201ENST00000368010 C1RP00736 705 aa26.03■■□□□ 1.76
PFDN2-201ENST00000368010 RPL17P18621 184 aaKnown RBP26.03■■□□□ 1.76
PFDN2-201ENST00000368010 FGFR3P22607 806 aa26.03■■□□□ 1.76
PFDN2-201ENST00000368010 BRCC3P46736 316 aa26.03■■□□□ 1.76
PFDN2-201ENST00000368010 POSTNQ15063 836 aa26.03■■□□□ 1.76
PFDN2-201ENST00000368010 PSMD5Q16401 504 aa26.03■■□□□ 1.76
PFDN2-201ENST00000368010 GLYCTKQ8IVS8 523 aa26.03■■□□□ 1.76
PFDN2-201ENST00000368010 CD302Q8IX05 232 aa26.03■■□□□ 1.76
PFDN2-201ENST00000368010 SYCP3Q8IZU3 236 aa26.03■■□□□ 1.76
PFDN2-201ENST00000368010 LNX1Q8TBB1 728 aaPredicted RBP26.03■■□□□ 1.76
PFDN2-201ENST00000368010 RIPOR3Q96MK2 946 aa26.03■■□□□ 1.76
PFDN2-201ENST00000368010 C7orf25Q9BPX7 421 aa26.03■■□□□ 1.76
PFDN2-201ENST00000368010 FGFBP2Q9BYJ0 223 aa26.03■■□□□ 1.76
PFDN2-201ENST00000368010 MAN1C1Q9NR34 630 aa26.03■■□□□ 1.76
PFDN2-201ENST00000368010 ADRB2P07550 413 aa26.02■■□□□ 1.76
PFDN2-201ENST00000368010 MTHFRP42898 656 aa26.02■■□□□ 1.76
PFDN2-201ENST00000368010 TMC5Q6UXY8 1006 aa26.02■■□□□ 1.76
PFDN2-201ENST00000368010 PALB2Q86YC2 1186 aa26.02■■□□□ 1.76
PFDN2-201ENST00000368010 CEP57L1Q8IYX8 460 aa26.02■■□□□ 1.76
PFDN2-201ENST00000368010 FAM212AQ96EL1 285 aa26.02■■□□□ 1.76
PFDN2-201ENST00000368010 SCAND2PQ9GZW5 306 aaPredicted RBP26.02■■□□□ 1.76
PFDN2-201ENST00000368010 TMEM206Q9H813 350 aa26.02■■□□□ 1.76
PFDN2-201ENST00000368010 CDH22Q9UJ99 828 aa26.02■■□□□ 1.76
PFDN2-201ENST00000368010 BDP1A6H8Y1 2624 aa26.02■■□□□ 1.76
PFDN2-201ENST00000368010 I3L4J1 428 aa26.01■■□□□ 1.75
PFDN2-201ENST00000368010 CYP3A5P20815 502 aa26.01■■□□□ 1.75
PFDN2-201ENST00000368010 CMA1P23946 247 aa26.01■■□□□ 1.75
PFDN2-201ENST00000368010 ACOT2P49753 483 aa26.01■■□□□ 1.75
PFDN2-201ENST00000368010 ZBTB6Q15916 424 aa26.01■■□□□ 1.75
PFDN2-201ENST00000368010 ATAT1Q5SQI0 421 aa26.01■■□□□ 1.75
PFDN2-201ENST00000368010 KANK3Q6NY19 840 aa26.01■■□□□ 1.75
PFDN2-201ENST00000368010 HDAC7Q8WUI4 952 aa26.01■■□□□ 1.75
PFDN2-201ENST00000368010 RPGRIP1Q96KN7 1286 aa26.01■■□□□ 1.75
PFDN2-201ENST00000368010 TGM5O43548 720 aa26■■□□□ 1.75
PFDN2-201ENST00000368010 PRPF6O94906 941 aaKnown RBP26■■□□□ 1.75
PFDN2-201ENST00000368010 PFKFB1P16118 471 aa26■■□□□ 1.75
PFDN2-201ENST00000368010 TKTP29401 623 aaKnown RBP26■■□□□ 1.75
PFDN2-201ENST00000368010 ADSSP30520 456 aa26■■□□□ 1.75
PFDN2-201ENST00000368010 LRPAP1P30533 357 aa26■■□□□ 1.75
PFDN2-201ENST00000368010 UNC13DQ70J99 1090 aa26■■□□□ 1.75
PFDN2-201ENST00000368010 KHSRPQ92945 711 aaKnown RBP eCLIP26■■□□□ 1.75
PFDN2-201ENST00000368010 HPS3Q969F9 1004 aa26■■□□□ 1.75
PFDN2-201ENST00000368010 CLSTN3Q9BQT9 956 aa26■■□□□ 1.75
PFDN2-201ENST00000368010 BLZF1Q9H2G9 400 aa26■■□□□ 1.75
PFDN2-201ENST00000368010 PLEKHA4Q9H4M7 779 aa26■■□□□ 1.75
PFDN2-201ENST00000368010 MUC3AQ02505 3323 aa26■■□□□ 1.75
PFDN2-201ENST00000368010 LOC730098B7Z3J9 87 aa25.99■■□□□ 1.75
PFDN2-201ENST00000368010 WEE2P0C1S8 567 aa25.99■■□□□ 1.75
PFDN2-201ENST00000368010 MCM4P33991 863 aa25.99■■□□□ 1.75
PFDN2-201ENST00000368010 AFMP43652 599 aa25.99■■□□□ 1.75
PFDN2-201ENST00000368010 NUCB2P80303 420 aa25.99■■□□□ 1.75
PFDN2-201ENST00000368010 POU5F1Q01860 360 aaKnown RBP25.99■■□□□ 1.75
PFDN2-201ENST00000368010 FAM26FQ5R3K3 315 aa25.99■■□□□ 1.75
PFDN2-201ENST00000368010 ANKS3Q6ZW76 656 aa25.99■■□□□ 1.75
PFDN2-201ENST00000368010 GPR149Q86SP6 731 aa25.99■■□□□ 1.75
PFDN2-201ENST00000368010 CMASQ8NFW8 434 aaPredicted RBP25.99■■□□□ 1.75
PFDN2-201ENST00000368010 POMKQ9H5K3 350 aa25.99■■□□□ 1.75
PFDN2-201ENST00000368010 ASB7Q9H672 318 aa25.99■■□□□ 1.75
PFDN2-201ENST00000368010 MTRRQ9UBK8 725 aa25.99■■□□□ 1.75
PFDN2-201ENST00000368010 SERTAD1Q9UHV2 236 aa25.99■■□□□ 1.75
PFDN2-201ENST00000368010 PDCD11Q14690 1871 aaKnown RBP25.99■■□□□ 1.75
PFDN2-201ENST00000368010 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.98■■□□□ 1.75
PFDN2-201ENST00000368010 A0A1B0GVL5 298 aa25.98■■□□□ 1.75
PFDN2-201ENST00000368010 SYN3O14994 580 aa25.98■■□□□ 1.75
PFDN2-201ENST00000368010 SLFN14P0C7P3 912 aa25.98■■□□□ 1.75
PFDN2-201ENST00000368010 SPATA31D3P0C874 917 aa25.98■■□□□ 1.75
PFDN2-201ENST00000368010 GARTP22102 1010 aa25.98■■□□□ 1.75
PFDN2-201ENST00000368010 JADE1Q6IE81 842 aa25.98■■□□□ 1.75
PFDN2-201ENST00000368010 LILRA6Q6PI73 481 aa25.98■■□□□ 1.75
PFDN2-201ENST00000368010 C15orf39Q6ZRI6 1047 aa25.98■■□□□ 1.75
PFDN2-201ENST00000368010 SPATA31D4Q6ZUB0 917 aa25.98■■□□□ 1.75
PFDN2-201ENST00000368010 BEST2Q8NFU1 509 aa25.98■■□□□ 1.75
PFDN2-201ENST00000368010 USP25Q9UHP3 1055 aa25.98■■□□□ 1.75
PFDN2-201ENST00000368010 DERAQ9Y315 318 aa25.98■■□□□ 1.75
PFDN2-201ENST00000368010 BACE2Q9Y5Z0 518 aa25.98■■□□□ 1.75
PFDN2-201ENST00000368010 EIF3DO15371 548 aaKnown RBP eCLIP25.97■■□□□ 1.75
PFDN2-201ENST00000368010 ACTN4O43707 911 aaKnown RBP25.97■■□□□ 1.75
PFDN2-201ENST00000368010 LDHAP00338 332 aaKnown RBP25.97■■□□□ 1.75
PFDN2-201ENST00000368010 NFICP08651 508 aa25.97■■□□□ 1.75
PFDN2-201ENST00000368010 CASP1P29466 404 aa25.97■■□□□ 1.75
PFDN2-201ENST00000368010 TMEM132DQ14C87 1099 aa25.97■■□□□ 1.75
PFDN2-201ENST00000368010 SPATA1Q5VX52 437 aa25.97■■□□□ 1.75
PFDN2-201ENST00000368010 KREMEN2Q8NCW0 462 aa25.97■■□□□ 1.75
PFDN2-201ENST00000368010 GLIS3Q8NEA6 775 aa25.97■■□□□ 1.75
PFDN2-201ENST00000368010 SUSD3Q96L08 255 aa25.97■■□□□ 1.75
PFDN2-201ENST00000368010 EPHX3Q9H6B9 360 aa25.97■■□□□ 1.75
PFDN2-201ENST00000368010 HPSEQ9Y251 543 aa25.97■■□□□ 1.75
PFDN2-201ENST00000368010 PLXNA3P51805 1871 aa25.97■■□□□ 1.75
PFDN2-201ENST00000368010 PVALEFA0A1B0GWK0 134 aa25.96■■□□□ 1.75
PFDN2-201ENST00000368010 PI4K2BG5E9Z4 385 aa25.96■■□□□ 1.75
PFDN2-201ENST00000368010 ALADP13716 330 aa25.96■■□□□ 1.75
PFDN2-201ENST00000368010 GUCY2FP51841 1108 aa25.96■■□□□ 1.75
PFDN2-201ENST00000368010 CUL4BQ13620 913 aa25.96■■□□□ 1.75
PFDN2-201ENST00000368010 VARS2Q5ST30 1063 aaKnown RBP25.96■■□□□ 1.75
PFDN2-201ENST00000368010 CRELD2Q6UXH1 353 aaPredicted RBP25.96■■□□□ 1.75
PFDN2-201ENST00000368010 RNF135Q8IUD6 432 aa25.96■■□□□ 1.75
PFDN2-201ENST00000368010 SAAL1Q96ER3 474 aa25.96■■□□□ 1.75
PFDN2-201ENST00000368010 FAM213AQ9BRX8 229 aa25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms