RNA–Protein interactions for RNA: ENSMUST00000201549.3

Scn8a-213, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS P5 TSL 5 BASIC

Gene Scn8a, Length 7,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-213ENSMUST00000201549 Kbtbd4Q8R179 534 aa9.7□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Lrrc46Q9DAP0 323 aa9.7□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Slc8a3S4R2P9 928 aa9.7□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Zfp839E9PUU5 921 aa9.7□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Krt10P02535 570 aa9.7□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Fam92bQ3V2J0 292 aa9.7□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Trpa1Q8BLA8 1125 aa9.7□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Arfip2Q8K221 341 aa9.7□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Trex1Q91XB0 314 aa9.7□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Rpn1Q91YQ5 608 aaKnown RBP9.7□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Catsper1Q91ZR5 686 aa9.7□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Them5Q9CQJ0 248 aa9.7□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Nde1Q9CZA6 344 aa9.7□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Twf2Q9Z0P5 349 aaKnown RBP9.7□□□□□ -0.86
Scn8a-213ENSMUST00000201549 6030498E09RikB1AX85 169 aa9.7□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Arhgef26D3YYY8 869 aa9.7□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Casq2O09161 415 aa9.7□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Cav1P49817 178 aa9.7□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Tfdp1Q08639 410 aa9.7□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Dsg1aQ61495 1057 aa9.7□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Tfe3Q64092 572 aaKnown RBP9.7□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Stx3Q64704 289 aa9.7□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Pla2g4cQ64GA5 597 aa9.7□□□□□ -0.86
Scn8a-213ENSMUST00000201549 ScocQ78YZ6 125 aa9.7□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Cpa1Q7TPZ8 419 aa9.7□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Wnk4Q80UE6 1222 aa9.7□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Cfap61Q8CEL2 1252 aa9.7□□□□□ -0.86
Scn8a-213ENSMUST00000201549 PawrQ925B0 333 aa9.7□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Sipa1l1Q8C0T5 1782 aa9.7□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Plekha7Q3UIL6 1118 aaKnown RBP9.7□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Upf3bQ3ULL6 472 aa9.7□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Trim75Q3UWZ0 467 aa9.7□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Utp14bQ6EJB6 756 aaKnown RBP9.7□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Foxo6Q70KY4 559 aa9.7□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Peg10Q7TN75 958 aaKnown RBP9.7□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Gprasp2Q8BUY8 826 aa9.7□□□□□ -0.86
Scn8a-213ENSMUST00000201549 AopepQ8BXQ6 817 aa9.7□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Igf2bp3Q9CPN8 579 aaKnown RBP9.7□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Prdm5Q9CXE0 599 aa9.7□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Tceal6Q9DB24 200 aa9.7□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Scgb2b20Q9JI02 112 aa9.7□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Zfp558E9Q1J0 407 aa9.7□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Aoc3O70423 765 aa9.7□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Znf746Q3U133 652 aa9.7□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Scaf8Q6DID3 1268 aa9.7□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Fhod1Q6P9Q4 1197 aa9.7□□□□□ -0.86
Scn8a-213ENSMUST00000201549 WhrnQ80VW5 918 aa9.7□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Ipo5Q8BKC5 1097 aaKnown RBP9.7□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Kirrel3Q8BR86 778 aa9.7□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Tdrd7Q8K1H1 1086 aaKnown RBP9.7□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Polr3fQ921X6 316 aa9.7□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Psmd9Q9CR00 222 aa9.7□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Ndel1Q9ERR1 345 aa9.7□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Lrrc38A2VDH3 298 aa9.69□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Akirin2B1AXD8 201 aa9.69□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Kdelc2G5E897 503 aa9.69□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Rfpl4bJ3QPR6 266 aa9.69□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Got1P05201 413 aa9.69□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Kcnn2P58390 839 aa9.69□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Trim72Q1XH17 477 aa9.69□□□□□ -0.86
Scn8a-213ENSMUST00000201549 FaxcQ3UMF9 409 aa9.69□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Krt42Q6IFX2 452 aa9.69□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Smg5Q6ZPY2 1017 aa9.69□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Btbd6Q8K2J9 488 aa9.69□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Mtfr1lQ9CWE0 289 aa9.69□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Ssc5dQ8BV57 1371 aa9.69□□□□□ -0.86
Scn8a-213ENSMUST00000201549 C130060K24RikG3UWA8 416 aa9.69□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Sema3eP70275 775 aa9.69□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Spink5Q148R4 1017 aa9.69□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Chrna5Q2MKA5 467 aa9.69□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Gm3414Q3TNU4 584 aa9.69□□□□□ -0.86
Scn8a-213ENSMUST00000201549 9130409I23RikQ3TS87 320 aa9.69□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Atxn7l3bQ3UD01 97 aa9.69□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Ankzf1Q80UU1 748 aaKnown RBP9.69□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Trpv6Q91WD2 767 aa9.69□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Rfc4Q99J62 364 aa9.69□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Castor1Q9CWQ8 331 aa9.69□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Tmed10Q9D1D4 219 aaKnown RBP9.69□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Abcg8Q9DBM0 673 aa9.69□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Trim10Q9WUH5 489 aa9.69□□□□□ -0.86
Scn8a-213ENSMUST00000201549 PfasQ5SUR0 1337 aa9.69□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Gm36210A0A1B0GS00 229 aa9.69□□□□□ -0.86
Scn8a-213ENSMUST00000201549 CtcflA2APF3 636 aa9.69□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Slc16a2O70324 545 aa9.69□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Klc2O88448 599 aa9.69□□□□□ -0.86
Scn8a-213ENSMUST00000201549 AfmO89020 608 aa9.69□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Arl4aP61213 200 aa9.69□□□□□ -0.86
Scn8a-213ENSMUST00000201549 FancbQ5XJY6 703 aa9.69□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Rbbp7Q60973 425 aaKnown RBP9.69□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Baiap3Q80TT2 1134 aa9.69□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Slc20a2Q80UP8 656 aa9.69□□□□□ -0.86
Scn8a-213ENSMUST00000201549 GanQ8CA72 597 aa9.69□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Abcg3Q99P81 650 aa9.69□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Snx2Q9CWK8 519 aa9.69□□□□□ -0.86
Scn8a-213ENSMUST00000201549 ToporslQ9D2F8 683 aa9.69□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Fut8Q9WTS2 575 aa9.69□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Mocs3A2BDX3 460 aaKnown RBP9.69□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Tac1P41539 130 aa9.69□□□□□ -0.86
Scn8a-213ENSMUST00000201549 UrosP51163 265 aa9.69□□□□□ -0.86
Scn8a-213ENSMUST00000201549 Tlr8P58682 1032 aa9.69□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 19.9 ms