RNA–Protein interactions for RNA: snR49

snR49, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR49, Length 165 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR49snR49 MRX3P38172 270 aa-0.59□□□□□ -2.5
snR49snR49 RRF1P38771 230 aa-0.59□□□□□ -2.5
snR49snR49 YRB2P40517 327 aa-0.59□□□□□ -2.5
snR49snR49 MNT4P53745 580 aa-0.59□□□□□ -2.5
snR49snR49 YDR124WQ04608 324 aa-0.59□□□□□ -2.5
snR49snR49 MSH5Q12175 901 aa-0.59□□□□□ -2.5
snR49snR49 MET5P47169 1442 aa-0.6□□□□□ -2.51
snR49snR49 YHR139C-AO13536 103 aa-0.6□□□□□ -2.51
snR49snR49 SAR1P20606 190 aaKnown RBP-0.6□□□□□ -2.51
snR49snR49 MGA1P53050 456 aa-0.6□□□□□ -2.51
snR49snR49 STH1P32597 1359 aa-0.6□□□□□ -2.51
snR49snR49 STP22P25604 385 aa-0.61□□□□□ -2.51
snR49snR49 CSM1P25651 190 aa-0.61□□□□□ -2.51
snR49snR49 RPC25P35718 212 aa-0.61□□□□□ -2.51
snR49snR49 SSO2P39926 295 aa-0.61□□□□□ -2.51
snR49snR49 PGD1P40356 397 aa-0.61□□□□□ -2.51
snR49snR49 YAE1P47118 141 aaPredicted RBP-0.61□□□□□ -2.51
snR49snR49 VOA1P53262 265 aa-0.61□□□□□ -2.51
snR49snR49 SAY1P53324 424 aa-0.61□□□□□ -2.51
snR49snR49 CUS2P53830 285 aaPredicted RBP-0.61□□□□□ -2.51
snR49snR49 VAC14Q06708 880 aa-0.61□□□□□ -2.51
snR49snR49 YPL257WQ08974 193 aa-0.61□□□□□ -2.51
snR49snR49 YCT1Q12235 531 aa-0.61□□□□□ -2.51
snR49snR49 VPS21P36017 210 aaKnown RBP-0.62□□□□□ -2.51
snR49snR49 YPT52P36018 234 aaKnown RBP-0.62□□□□□ -2.51
snR49snR49 EDC3P39998 551 aaKnown RBP-0.62□□□□□ -2.51
snR49snR49 YEA4P40004 342 aa-0.62□□□□□ -2.51
snR49snR49 FLX1P40464 311 aa-0.62□□□□□ -2.51
snR49snR49 ERJ5P43613 295 aaPredicted RBP-0.62□□□□□ -2.51
snR49snR49 GPI8P49018 411 aa-0.62□□□□□ -2.51
snR49snR49 AIF1P52923 378 aa-0.62□□□□□ -2.51
snR49snR49 RMR1P53060 241 aa-0.62□□□□□ -2.51
snR49snR49 POP3P53833 195 aaPredicted RBP-0.62□□□□□ -2.51
snR49snR49 ABZ2Q03266 374 aa-0.62□□□□□ -2.51
snR49snR49 RRG8Q06109 277 aa-0.62□□□□□ -2.51
snR49snR49 YPR172WQ06608 200 aa-0.62□□□□□ -2.51
snR49snR49 DDR48P18899 430 aaKnown RBP-0.63□□□□□ -2.51
snR49snR49 YHL042WP38729 150 aa-0.63□□□□□ -2.51
snR49snR49 VPS45P38932 577 aa-0.63□□□□□ -2.51
snR49snR49 MRH4P53166 561 aa-0.63□□□□□ -2.51
snR49snR49 GOT1Q03554 138 aa-0.63□□□□□ -2.51
snR49snR49 SPG3Q04398 127 aaPredicted RBP-0.63□□□□□ -2.51
snR49snR49 PRM3Q08931 133 aa-0.63□□□□□ -2.51
snR49snR49 SME1Q12330 94 aaPredicted RBP-0.63□□□□□ -2.51
snR49snR49 FMP49A0A023PZB3 126 aa-0.64□□□□□ -2.51
snR49snR49 EHD3P28817 500 aa-0.64□□□□□ -2.51
snR49snR49 HSM3P38348 480 aa-0.64□□□□□ -2.51
snR49snR49 SIP3P38717 1229 aa-0.64□□□□□ -2.51
snR49snR49 ARO8P53090 500 aaKnown RBP-0.64□□□□□ -2.51
snR49snR49 SYC1Q08553 188 aaPredicted RBP-0.64□□□□□ -2.51
snR49snR49 TAO3P40468 2376 aa-0.64□□□□□ -2.51
snR49snR49 PDR18P53756 1333 aa-0.64□□□□□ -2.51
snR49snR49 FRS2P15625 503 aaKnown RBP-0.65□□□□□ -2.51
snR49snR49 TFC1P32367 649 aa-0.65□□□□□ -2.51
snR49snR49 JEN1P36035 616 aa-0.65□□□□□ -2.51
snR49snR49 RPA43P46669 326 aa-0.65□□□□□ -2.51
snR49snR49 YJR056CP47115 236 aa-0.65□□□□□ -2.51
snR49snR49 YNL247WP53852 767 aaKnown RBP-0.65□□□□□ -2.51
snR49snR49 RCE1Q03530 315 aa-0.65□□□□□ -2.51
snR49snR49 SNF2P22082 1703 aa-0.65□□□□□ -2.51
snR49snR49 CDC8P00572 216 aa-0.66□□□□□ -2.52
snR49snR49 ECM33P38248 429 aaKnown RBP-0.66□□□□□ -2.52
snR49snR49 YNR077CP53758 84 aa-0.66□□□□□ -2.52
snR49snR49 NOP13P53883 403 aaKnown RBP RIP-Chip data-0.66□□□□□ -2.52not detected
snR49snR49 CWC27Q02770 301 aa-0.66□□□□□ -2.52
snR49snR49 CUR1Q06469 252 aa-0.66□□□□□ -2.52
snR49snR49 COQ10Q08058 207 aa-0.66□□□□□ -2.52
snR49snR49 YLR157W-EP0CF00 54 aa-0.67□□□□□ -2.52
snR49snR49 YAR068WP39564 161 aa-0.67□□□□□ -2.52
snR49snR49 PEX17P40155 199 aa-0.67□□□□□ -2.52
snR49snR49 DSN1P40568 576 aa-0.67□□□□□ -2.52
snR49snR49 SNZ3P43545 298 aa-0.67□□□□□ -2.52
snR49snR49 KNH1P50112 268 aa-0.67□□□□□ -2.52
snR49snR49 DOC1P53068 250 aa-0.67□□□□□ -2.52
snR49snR49 LSB1P53281 241 aa-0.67□□□□□ -2.52
snR49snR49 YPR147CQ06522 304 aaKnown RBP-0.67□□□□□ -2.52
snR49snR49 YPR013CQ12145 317 aa-0.67□□□□□ -2.52
snR49snR49 ERP4Q12450 207 aa-0.67□□□□□ -2.52
snR49snR49 YLR307C-AQ3E825 87 aa-0.67□□□□□ -2.52
snR49snR49 YCL042WP25572 119 aa-0.68□□□□□ -2.52
snR49snR49 PRX1P34227 261 aaKnown RBP-0.68□□□□□ -2.52
snR49snR49 RPF1P38805 295 aaKnown RBP-0.68□□□□□ -2.52
snR49snR49 THO1P40040 218 aaKnown RBP-0.68□□□□□ -2.52
snR49snR49 MEP1P40260 492 aa-0.68□□□□□ -2.52
snR49snR49 BCP1Q06338 283 aa-0.68□□□□□ -2.52
snR49snR49 YOR186WQ08560 144 aa-0.68□□□□□ -2.52
snR49snR49 NIP7Q08962 181 aaKnown RBP-0.68□□□□□ -2.52
snR49snR49 CCW12Q12127 133 aa-0.68□□□□□ -2.52
snR49snR49 SNF8Q12483 233 aa-0.68□□□□□ -2.52
snR49snR49 HTL1Q9URQ5 78 aa-0.68□□□□□ -2.52
snR49snR49 YDR157WA0A023PZE8 133 aa-0.69□□□□□ -2.52
snR49snR49 SIR2P06700 562 aa-0.69□□□□□ -2.52
snR49snR49 YSR3P23501 404 aa-0.69□□□□□ -2.52
snR49snR49 HHY1P39982 102 aa-0.69□□□□□ -2.52
snR49snR49 YEL008WP40001 126 aa-0.69□□□□□ -2.52
snR49snR49 GAS3Q03655 524 aa-0.69□□□□□ -2.52
snR49snR49 RCF1Q03713 159 aa-0.69□□□□□ -2.52
snR49snR49 ADH6Q04894 360 aaKnown RBP-0.69□□□□□ -2.52
snR49snR49 YPR203WQ08994 102 aa-0.69□□□□□ -2.52
snR49snR49 BLM10P43583 2143 aa-0.7□□□□□ -2.52
Retrieved 100 of 5,963 RNA–protein pairs in 143 ms