RNA–Protein interactions for RNA: YNR031C

SSK2, Transcript of MAP kinase kinase kinase of HOG1 mitogen-activated signaling pathway, yeast

Gene SSK2, Length 4,740 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSK2	YNR031C	YDR157W	A0A023PZE8	133 aa		1.34	□□□□□ -2.19
SSK2	YNR031C	TIM9	O74700	87 aa		1.34	□□□□□ -2.19
SSK2	YNR031C	SPT3	P06844	337 aa		1.34	□□□□□ -2.19
SSK2	YNR031C	YSR3	P23501	404 aa		1.34	□□□□□ -2.19
SSK2	YNR031C	YKL102C	P34249	101 aa		1.34	□□□□□ -2.19
SSK2	YNR031C	UPS2	P35200	230 aa		1.34	□□□□□ -2.19
SSK2	YNR031C	SLM4	P38247	162 aa		1.34	□□□□□ -2.19
SSK2	YNR031C	ARN1	P38731	627 aa		1.34	□□□□□ -2.19
SSK2	YNR031C	PCL5	P38794	229 aa		1.34	□□□□□ -2.19
SSK2	YNR031C	GET2	P40056	285 aa		1.34	□□□□□ -2.19
SSK2	YNR031C	CAK1	P43568	368 aa	Predicted RBP	1.34	□□□□□ -2.19
SSK2	YNR031C	TAX4	P47030	604 aa		1.34	□□□□□ -2.19
SSK2	YNR031C	YJL043W	P47053	257 aa		1.34	□□□□□ -2.19
SSK2	YNR031C	YGL159W	P53110	370 aa		1.34	□□□□□ -2.19
SSK2	YNR031C	JAC1	P53193	184 aa		1.34	□□□□□ -2.19
SSK2	YNR031C	SMM1	P53720	384 aa	Known RBP	1.34	□□□□□ -2.19
SSK2	YNR031C	RHO3	Q00245	231 aa	Known RBP	1.34	□□□□□ -2.19
SSK2	YNR031C	DYN2	Q02647	92 aa		1.34	□□□□□ -2.19
SSK2	YNR031C	MIX14	Q04341	121 aa		1.34	□□□□□ -2.19
SSK2	YNR031C	YDR278C	Q05612	105 aa		1.34	□□□□□ -2.19
SSK2	YNR031C	RIF2	Q06208	395 aa		1.34	□□□□□ -2.19
SSK2	YNR031C	TEN1	Q07921	160 aa		1.34	□□□□□ -2.19
SSK2	YNR031C	SLD7	Q08457	257 aa		1.34	□□□□□ -2.19
SSK2	YNR031C	LAS17	Q12446	633 aa		1.34	□□□□□ -2.19
SSK2	YNR031C	YPL119C-A	Q3E751	87 aa		1.34	□□□□□ -2.19
SSK2	YNR031C	AHC2	P25649	128 aa		1.34	□□□□□ -2.19
SSK2	YNR031C	COQ3	P27680	312 aa		1.34	□□□□□ -2.19
SSK2	YNR031C	UGP1	P32861	499 aa	Known RBP	1.34	□□□□□ -2.19
SSK2	YNR031C	TIR2	P33890	251 aa		1.34	□□□□□ -2.19
SSK2	YNR031C	KTI12	P34253	313 aa	Known RBP	1.34	□□□□□ -2.19
SSK2	YNR031C	THI80	P35202	319 aa		1.34	□□□□□ -2.19
SSK2	YNR031C	RMA1	P36001	430 aa	Known RBP	1.34	□□□□□ -2.19
SSK2	YNR031C	YPC1	P38298	316 aa		1.34	□□□□□ -2.19
SSK2	YNR031C	POG1	P40473	351 aa		1.34	□□□□□ -2.19
SSK2	YNR031C	MUP1	P50276	574 aa		1.34	□□□□□ -2.19
SSK2	YNR031C	SBH2	P52871	88 aa		1.34	□□□□□ -2.19
SSK2	YNR031C	USE1	P53146	245 aa		1.34	□□□□□ -2.19
SSK2	YNR031C	YGR126W	P53274	230 aa		1.34	□□□□□ -2.19
SSK2	YNR031C	PIR3	Q03180	325 aa		1.34	□□□□□ -2.19
SSK2	YNR031C	YMR034C	Q05131	434 aa	Predicted RBP	1.34	□□□□□ -2.19
SSK2	YNR031C	MRX9	Q07349	420 aa	Known RBP	1.34	□□□□□ -2.19
SSK2	YNR031C	YOL159C	Q08300	171 aa		1.34	□□□□□ -2.19
SSK2	YNR031C	NRT1	Q08485	598 aa		1.34	□□□□□ -2.19
SSK2	YNR031C	SAM4	Q08985	325 aa	Known RBP	1.34	□□□□□ -2.19
SSK2	YNR031C	FCY22	Q12119	530 aa		1.34	□□□□□ -2.19
SSK2	YNR031C	YLR122C	Q12312	125 aa		1.34	□□□□□ -2.19
SSK2	YNR031C	TY1A-NL1	Q12391	440 aa	Known RBP	1.34	□□□□□ -2.19
SSK2	YNR031C	MRX4	Q12467	430 aa		1.34	□□□□□ -2.19
SSK2	YNR031C	HTB1	P02293	131 aa	Known RBP	1.34	□□□□□ -2.2
SSK2	YNR031C	HTB2	P02294	131 aa		1.34	□□□□□ -2.2
SSK2	YNR031C	GCR1	P07261	785 aa		1.34	□□□□□ -2.2
SSK2	YNR031C	SPO12	P17123	173 aa		1.34	□□□□□ -2.2
SSK2	YNR031C	RNA15	P25299	296 aa	Predicted RBP	1.34	□□□□□ -2.2
SSK2	YNR031C	BOS1	P25385	244 aa		1.34	□□□□□ -2.2
SSK2	YNR031C	INO2	P26798	304 aa		1.34	□□□□□ -2.2
SSK2	YNR031C	EHD3	P28817	500 aa		1.34	□□□□□ -2.2
SSK2	YNR031C	TRR1	P29509	319 aa	Known RBP	1.34	□□□□□ -2.2
SSK2	YNR031C	VMA5	P31412	392 aa	Known RBP	1.34	□□□□□ -2.2
SSK2	YNR031C	RNP1	P32385	249 aa		1.34	□□□□□ -2.2
SSK2	YNR031C	TIP20	P33891	701 aa		1.34	□□□□□ -2.2
SSK2	YNR031C	TUL1	P36096	758 aa		1.34	□□□□□ -2.2
SSK2	YNR031C	APL3	P38065	1025 aa		1.34	□□□□□ -2.2
SSK2	YNR031C	RRN10	P38204	145 aa		1.34	□□□□□ -2.2
SSK2	YNR031C	VBA2	P38358	474 aa	Known RBP	1.34	□□□□□ -2.2
SSK2	YNR031C	YIL060W	P40519	144 aa		1.34	□□□□□ -2.2
SSK2	YNR031C	PRM10	P42946	383 aa		1.34	□□□□□ -2.2
SSK2	YNR031C	TAH11	P47112	604 aa		1.34	□□□□□ -2.2
SSK2	YNR031C	COS10	P52924	374 aa		1.34	□□□□□ -2.2
SSK2	YNR031C	SSU72	P53538	206 aa	Predicted RBP	1.34	□□□□□ -2.2
SSK2	YNR031C	COG5	P53951	403 aa		1.34	□□□□□ -2.2
SSK2	YNR031C	SHR3	Q02774	210 aa		1.34	□□□□□ -2.2
SSK2	YNR031C	YPL108W	Q02872	168 aa	Predicted RBP	1.34	□□□□□ -2.2
SSK2	YNR031C	ATG21	Q02887	496 aa		1.34	□□□□□ -2.2
SSK2	YNR031C	ODC1	Q03028	310 aa		1.34	□□□□□ -2.2
SSK2	YNR031C	PEX12	Q04370	399 aa		1.34	□□□□□ -2.2
SSK2	YNR031C	TDA6	Q06466	467 aa		1.34	□□□□□ -2.2
SSK2	YNR031C	ASA1	Q06822	443 aa		1.34	□□□□□ -2.2
SSK2	YNR031C	IRC19	Q07843	230 aa		1.34	□□□□□ -2.2
SSK2	YNR031C	ATG10	Q07879	167 aa		1.34	□□□□□ -2.2
SSK2	YNR031C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	1.34	□□□□□ -2.2	not detected
SSK2	YNR031C	GPB1	Q08886	897 aa		1.34	□□□□□ -2.2
SSK2	YNR031C	PRS5	Q12265	496 aa	Known RBP	1.34	□□□□□ -2.2
SSK2	YNR031C	LPX1	Q12405	387 aa	Known RBP	1.34	□□□□□ -2.2
SSK2	YNR031C	CUP2	P15315	225 aa		1.34	□□□□□ -2.2
SSK2	YNR031C	CMK2	P22517	447 aa		1.34	□□□□□ -2.2
SSK2	YNR031C	RFA3	P26755	122 aa	Known RBP	1.34	□□□□□ -2.2
SSK2	YNR031C	MRP20	P32387	263 aa		1.34	□□□□□ -2.2
SSK2	YNR031C	MCH2	P36032	473 aa		1.34	□□□□□ -2.2
SSK2	YNR031C	JEN1	P36035	616 aa		1.34	□□□□□ -2.2
SSK2	YNR031C	YRA2	P36036	203 aa	Known RBP RIP-Chip data	1.34	□□□□□ -2.2	not detected
SSK2	YNR031C	YKL071W	P36086	256 aa		1.34	□□□□□ -2.2
SSK2	YNR031C	YBR063C	P38083	404 aa		1.34	□□□□□ -2.2
SSK2	YNR031C	MOH1	P38191	138 aa		1.34	□□□□□ -2.2
SSK2	YNR031C	TRR2	P38816	342 aa		1.34	□□□□□ -2.2
SSK2	YNR031C	BMT5	P40493	336 aa		1.34	□□□□□ -2.2
SSK2	YNR031C	GTT1	P40582	234 aa		1.34	□□□□□ -2.2
SSK2	YNR031C	YAE1	P47118	141 aa	Predicted RBP	1.34	□□□□□ -2.2
SSK2	YNR031C	SYF2	P53277	215 aa	Predicted RBP	1.34	□□□□□ -2.2
SSK2	YNR031C	YNR048W	P53740	393 aa		1.34	□□□□□ -2.2
SSK2	YNR031C	STD1	Q02794	444 aa		1.34	□□□□□ -2.2

Retrieved 100 of 5,963 RNA–protein pairs in 31.6 ms